RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 MAP3K13O43283 966 aa16.49■□□□□ 0.23
NEDD1-207ENST00000555114 RTN3O95197 1032 aaPredicted RBP16.49■□□□□ 0.23
NEDD1-207ENST00000555114 OLFM2O95897 454 aa16.49■□□□□ 0.23
NEDD1-207ENST00000555114 MBL2P11226 248 aaPredicted RBP16.49■□□□□ 0.23
NEDD1-207ENST00000555114 SNRPFP62306 86 aaKnown RBP16.49■□□□□ 0.23
NEDD1-207ENST00000555114 ZNF252P-AS1Q0IIN9 211 aa16.49■□□□□ 0.23
NEDD1-207ENST00000555114 LMAN2Q12907 356 aa16.49■□□□□ 0.23
NEDD1-207ENST00000555114 TAF10Q12962 218 aa16.49■□□□□ 0.23
NEDD1-207ENST00000555114 TRPC3Q13507 836 aa16.49■□□□□ 0.23
NEDD1-207ENST00000555114 SNRNP35Q16560 246 aaKnown RBP16.49■□□□□ 0.23
NEDD1-207ENST00000555114 SH3PXD2AQ5TCZ1 1133 aa16.49■□□□□ 0.23
NEDD1-207ENST00000555114 NUDT18Q6ZVK8 323 aa16.49■□□□□ 0.23
NEDD1-207ENST00000555114 LPCAT2Q7L5N7 544 aa16.49■□□□□ 0.23
NEDD1-207ENST00000555114 ADGRG2Q8IZP9 1017 aa16.49■□□□□ 0.23
NEDD1-207ENST00000555114 PIGKQ92643 395 aa16.49■□□□□ 0.23
NEDD1-207ENST00000555114 ZSCAN16Q9H4T2 348 aaPredicted RBP16.49■□□□□ 0.23
NEDD1-207ENST00000555114 SMPD4Q9NXE4 827 aa16.49■□□□□ 0.23
NEDD1-207ENST00000555114 CFAP97Q9P2B7 532 aa16.49■□□□□ 0.23
NEDD1-207ENST00000555114 CLSTN1O94985 981 aa16.48■□□□□ 0.23
NEDD1-207ENST00000555114 KAT7O95251 611 aa16.48■□□□□ 0.23
NEDD1-207ENST00000555114 KLF8O95600 359 aaPredicted RBP16.48■□□□□ 0.23
NEDD1-207ENST00000555114 OAS1P00973 400 aaKnown RBP16.48■□□□□ 0.23
NEDD1-207ENST00000555114 PROS1P07225 676 aa16.48■□□□□ 0.23
NEDD1-207ENST00000555114 ADH5P11766 374 aa16.48■□□□□ 0.23
NEDD1-207ENST00000555114 CEACAM1P13688 526 aa16.48■□□□□ 0.23
NEDD1-207ENST00000555114 PTPN1P18031 435 aaKnown RBP16.48■□□□□ 0.23
NEDD1-207ENST00000555114 CSRP1P21291 193 aaKnown RBP16.48■□□□□ 0.23
NEDD1-207ENST00000555114 SYT1P21579 422 aa16.48■□□□□ 0.23
NEDD1-207ENST00000555114 YWHAQP27348 245 aa16.48■□□□□ 0.23
NEDD1-207ENST00000555114 GRIA2P42262 883 aa16.48■□□□□ 0.23
NEDD1-207ENST00000555114 ASIC1P78348 528 aa16.48■□□□□ 0.23
NEDD1-207ENST00000555114 ZXDBP98169 803 aa16.48■□□□□ 0.23
NEDD1-207ENST00000555114 IFRD2Q12894 506 aaPredicted RBP16.48■□□□□ 0.23
NEDD1-207ENST00000555114 STK38Q15208 465 aa16.48■□□□□ 0.23
NEDD1-207ENST00000555114 WDR72Q3MJ13 1102 aa16.48■□□□□ 0.23
NEDD1-207ENST00000555114 BTBD8Q5XKL5 378 aa16.48■□□□□ 0.23
NEDD1-207ENST00000555114 FAM173BQ6P4H8 233 aa16.48■□□□□ 0.23
NEDD1-207ENST00000555114 TRMT11Q7Z4G4 463 aaKnown RBP16.48■□□□□ 0.23
NEDD1-207ENST00000555114 ALLCQ8N6M5 410 aa16.48■□□□□ 0.23
NEDD1-207ENST00000555114 RDH13Q8NBN7 331 aa16.48■□□□□ 0.23
NEDD1-207ENST00000555114 TXNDC5Q8NBS9 432 aaKnown RBP16.48■□□□□ 0.23
NEDD1-207ENST00000555114 OVCA2Q8WZ82 227 aa16.48■□□□□ 0.23
NEDD1-207ENST00000555114 OTUB2Q96DC9 234 aa16.48■□□□□ 0.23
NEDD1-207ENST00000555114 USP28Q96RU2 1077 aa16.48■□□□□ 0.23
NEDD1-207ENST00000555114 CGRRF1Q99675 332 aa16.48■□□□□ 0.23
NEDD1-207ENST00000555114 MRPL45Q9BRJ2 306 aaKnown RBP16.48■□□□□ 0.23
NEDD1-207ENST00000555114 NUSAP1Q9BXS6 441 aaKnown RBP16.48■□□□□ 0.23
NEDD1-207ENST00000555114 RNF38Q9H0F5 515 aa16.48■□□□□ 0.23
NEDD1-207ENST00000555114 ARHGEF4Q9NR80 690 aa16.48■□□□□ 0.23
NEDD1-207ENST00000555114 EVLQ9UI08 416 aaPredicted RBP16.48■□□□□ 0.23
NEDD1-207ENST00000555114 ANAPC1Q9H1A4 1944 aa16.48■□□□□ 0.23
NEDD1-207ENST00000555114 UBE4BO95155 1302 aa16.47■□□□□ 0.23
NEDD1-207ENST00000555114 HELZP42694 1942 aaKnown RBP16.47■□□□□ 0.23
NEDD1-207ENST00000555114 A0A087X0B3 334 aa16.47■□□□□ 0.23
NEDD1-207ENST00000555114 E2F8A0AVK6 867 aa16.47■□□□□ 0.23
NEDD1-207ENST00000555114 A8MXQ7 604 aa16.47■□□□□ 0.23
NEDD1-207ENST00000555114 BCKDHBP21953 392 aa16.47■□□□□ 0.23
NEDD1-207ENST00000555114 ATICP31939 592 aa16.47■□□□□ 0.23
NEDD1-207ENST00000555114 TIE1P35590 1138 aa16.47■□□□□ 0.23
NEDD1-207ENST00000555114 TNFRSF4P43489 277 aa16.47■□□□□ 0.23
NEDD1-207ENST00000555114 GAD2Q05329 585 aa16.47■□□□□ 0.23
NEDD1-207ENST00000555114 FOXC1Q12948 553 aa16.47■□□□□ 0.23
NEDD1-207ENST00000555114 PSMD6Q15008 389 aa16.47■□□□□ 0.23
NEDD1-207ENST00000555114 GAB4Q2WGN9 574 aa16.47■□□□□ 0.23
NEDD1-207ENST00000555114 SPDYCQ5MJ68 293 aa16.47■□□□□ 0.23
NEDD1-207ENST00000555114 FAM26FQ5R3K3 315 aa16.47■□□□□ 0.23
NEDD1-207ENST00000555114 NUP93Q8N1F7 819 aa16.47■□□□□ 0.23
NEDD1-207ENST00000555114 PGBD3Q8N328 593 aa16.47■□□□□ 0.23
NEDD1-207ENST00000555114 XXYLT1Q8NBI6 393 aa16.47■□□□□ 0.23
NEDD1-207ENST00000555114 B3GALNT2Q8NCR0 500 aa16.47■□□□□ 0.23
NEDD1-207ENST00000555114 FBXO32Q969P5 355 aa16.47■□□□□ 0.23
NEDD1-207ENST00000555114 SYAP1Q96A49 352 aaPredicted RBP16.47■□□□□ 0.23
NEDD1-207ENST00000555114 CCDC127Q96BQ5 260 aa16.47■□□□□ 0.23
NEDD1-207ENST00000555114 TRIM9Q9C026 710 aa16.47■□□□□ 0.23
NEDD1-207ENST00000555114 AGPAT3Q9NRZ7 376 aa16.47■□□□□ 0.23
NEDD1-207ENST00000555114 SH3BP1Q9Y3L3 701 aa16.47■□□□□ 0.23
NEDD1-207ENST00000555114 KIAA1549LQ6ZVL6 1849 aa16.47■□□□□ 0.23
NEDD1-207ENST00000555114 TNFRSF10BO14763 440 aa16.46■□□□□ 0.23
NEDD1-207ENST00000555114 ZBTB24O43167 697 aaPredicted RBP16.46■□□□□ 0.23
NEDD1-207ENST00000555114 PHACTR2O75167 634 aa16.46■□□□□ 0.23
NEDD1-207ENST00000555114 STAU1O95793 577 aaKnown RBP16.46■□□□□ 0.23
NEDD1-207ENST00000555114 P2RY2P41231 377 aa16.46■□□□□ 0.23
NEDD1-207ENST00000555114 CYP2J2P51589 502 aa16.46■□□□□ 0.23
NEDD1-207ENST00000555114 CYP24A1Q07973 514 aa16.46■□□□□ 0.23
NEDD1-207ENST00000555114 UAP1L1Q3KQV9 507 aa16.46■□□□□ 0.23
NEDD1-207ENST00000555114 TRIM61Q5EBN2 209 aa16.46■□□□□ 0.23
NEDD1-207ENST00000555114 RHBDF2Q6PJF5 856 aa16.46■□□□□ 0.23
NEDD1-207ENST00000555114 UNQ6494/PRO21346Q6UXR6 183 aa16.46■□□□□ 0.23
NEDD1-207ENST00000555114 TMEM92Q6UXU6 159 aa16.46■□□□□ 0.23
NEDD1-207ENST00000555114 IQUBQ8NA54 791 aa16.46■□□□□ 0.23
NEDD1-207ENST00000555114 IL17RCQ8NAC3 791 aa16.46■□□□□ 0.23
NEDD1-207ENST00000555114 OLIG1Q8TAK6 271 aa16.46■□□□□ 0.23
NEDD1-207ENST00000555114 ZNF507Q8TCN5 953 aa16.46■□□□□ 0.23
NEDD1-207ENST00000555114 KCNV2Q8TDN2 545 aa16.46■□□□□ 0.23
NEDD1-207ENST00000555114 ZNF518BQ9C0D4 1074 aa16.46■□□□□ 0.23
NEDD1-207ENST00000555114 SLC32A1Q9H598 525 aa16.46■□□□□ 0.23
NEDD1-207ENST00000555114 KBTBD4Q9NVX7 518 aa16.46■□□□□ 0.23
NEDD1-207ENST00000555114 CGNQ9P2M7 1197 aaKnown RBP16.46■□□□□ 0.23
NEDD1-207ENST00000555114 NXF1Q9UBU9 619 aaKnown RBP16.46■□□□□ 0.23
NEDD1-207ENST00000555114 MYO16Q9Y6X6 1858 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms