RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 NAV2Q8IVL1 2488 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 ADAMTSL1Q8N6G6 1762 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 HTTP42858 3142 aa6.15□□□□□ -1.42
CPSF6-206ENST00000550987 LOC102723971A0A1B0GUV8 181 aa6.15□□□□□ -1.42
CPSF6-206ENST00000550987 TRIM38O00635 465 aa6.15□□□□□ -1.42
CPSF6-206ENST00000550987 VPS4BO75351 444 aa6.15□□□□□ -1.42
CPSF6-206ENST00000550987 KRT38O76015 456 aa6.15□□□□□ -1.42
CPSF6-206ENST00000550987 STC2O76061 302 aa6.15□□□□□ -1.42
CPSF6-206ENST00000550987 KIF20AO95235 890 aa6.15□□□□□ -1.42
CPSF6-206ENST00000550987 PYGLP06737 847 aa6.15□□□□□ -1.42
CPSF6-206ENST00000550987 TPH1P17752 444 aa6.15□□□□□ -1.42
CPSF6-206ENST00000550987 BTF3P20290 206 aaKnown RBP6.15□□□□□ -1.42
CPSF6-206ENST00000550987 GLDCP23378 1020 aa6.15□□□□□ -1.42
CPSF6-206ENST00000550987 ITGB8P26012 769 aa6.15□□□□□ -1.42
CPSF6-206ENST00000550987 SERPINF1P36955 418 aa6.15□□□□□ -1.42
CPSF6-206ENST00000550987 ADAM8P78325 824 aa6.15□□□□□ -1.42
CPSF6-206ENST00000550987 DLX2Q07687 328 aaPredicted RBP6.15□□□□□ -1.42
CPSF6-206ENST00000550987 DUSP8Q13202 625 aa6.15□□□□□ -1.42
CPSF6-206ENST00000550987 PTK2BQ14289 1009 aa6.15□□□□□ -1.42
CPSF6-206ENST00000550987 MAPRE1Q15691 268 aaKnown RBP6.15□□□□□ -1.42
CPSF6-206ENST00000550987 VWA3BQ502W6 1294 aa6.15□□□□□ -1.42
CPSF6-206ENST00000550987 LVRNQ6Q4G3 990 aa6.15□□□□□ -1.42
CPSF6-206ENST00000550987 ATG14Q6ZNE5 492 aa6.15□□□□□ -1.42
CPSF6-206ENST00000550987 VGLL2Q8N8G2 317 aa6.15□□□□□ -1.42
CPSF6-206ENST00000550987 GLIS1Q8NBF1 620 aa6.15□□□□□ -1.42
CPSF6-206ENST00000550987 CYP2W1Q8TAV3 490 aa6.15□□□□□ -1.42
CPSF6-206ENST00000550987 MPP4Q96JB8 637 aa6.15□□□□□ -1.42
CPSF6-206ENST00000550987 ZNF512Q96ME7 567 aaPredicted RBP6.15□□□□□ -1.42
CPSF6-206ENST00000550987 PPP1R9BQ96SB3 815 aa6.15□□□□□ -1.42
CPSF6-206ENST00000550987 TMX4Q9H1E5 349 aaPredicted RBP6.15□□□□□ -1.42
CPSF6-206ENST00000550987 HEYLQ9NQ87 328 aaPredicted RBP6.15□□□□□ -1.42
CPSF6-206ENST00000550987 NECTIN3Q9NQS3 549 aa6.15□□□□□ -1.42
CPSF6-206ENST00000550987 FBXO34Q9NWN3 711 aa6.15□□□□□ -1.42
CPSF6-206ENST00000550987 RGL1Q9NZL6 768 aa6.15□□□□□ -1.42
CPSF6-206ENST00000550987 LRRFIP2Q9Y608 721 aaKnown RBP6.15□□□□□ -1.42
CPSF6-206ENST00000550987 DCHS1Q96JQ0 3298 aa6.15□□□□□ -1.43
CPSF6-206ENST00000550987 PRXQ9BXM0 1461 aa6.15□□□□□ -1.43
CPSF6-206ENST00000550987 AQP12BA6NM10 295 aa6.14□□□□□ -1.43
CPSF6-206ENST00000550987 SYT5O00445 386 aa6.14□□□□□ -1.43
CPSF6-206ENST00000550987 ACKR2O00590 384 aa6.14□□□□□ -1.43
CPSF6-206ENST00000550987 EPB41L2O43491 1005 aaKnown RBP6.14□□□□□ -1.43
CPSF6-206ENST00000550987 CDC14BO60729 498 aa6.14□□□□□ -1.43
CPSF6-206ENST00000550987 PIM1P11309 404 aaPredicted RBP6.14□□□□□ -1.43
CPSF6-206ENST00000550987 CYP2C9P11712 490 aa6.14□□□□□ -1.43
CPSF6-206ENST00000550987 IL1R1P14778 569 aa6.14□□□□□ -1.43
CPSF6-206ENST00000550987 GNAT2P19087 354 aa6.14□□□□□ -1.43
CPSF6-206ENST00000550987 COPAP53621 1224 aa6.14□□□□□ -1.43
CPSF6-206ENST00000550987 CAP1Q01518 475 aa6.14□□□□□ -1.43
CPSF6-206ENST00000550987 INSCQ1MX18 579 aa6.14□□□□□ -1.43
CPSF6-206ENST00000550987 CYP26C1Q6V0L0 522 aa6.14□□□□□ -1.43
CPSF6-206ENST00000550987 MED25Q71SY5 747 aa6.14□□□□□ -1.43
CPSF6-206ENST00000550987 CCDC117Q8IWD4 279 aaPredicted RBP6.14□□□□□ -1.43
CPSF6-206ENST00000550987 TMIEQ8NEW7 156 aa6.14□□□□□ -1.43
CPSF6-206ENST00000550987 UBXN10Q96LJ8 280 aa6.14□□□□□ -1.43
CPSF6-206ENST00000550987 GUCD1Q96NT3 240 aa6.14□□□□□ -1.43
CPSF6-206ENST00000550987 PRPF18Q99633 342 aaKnown RBP6.14□□□□□ -1.43
CPSF6-206ENST00000550987 CNPPD1Q9BV87 410 aa6.14□□□□□ -1.43
CPSF6-206ENST00000550987 RALYQ9UKM9 306 aaKnown RBP6.14□□□□□ -1.43
CPSF6-206ENST00000550987 AGAP1Q9UPQ3 857 aa6.14□□□□□ -1.43
CPSF6-206ENST00000550987 CLCA2Q9UQC9 943 aa6.14□□□□□ -1.43
CPSF6-206ENST00000550987 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.14□□□□□ -1.43
CPSF6-206ENST00000550987 SLIT3O75094 1523 aa6.14□□□□□ -1.43
CPSF6-206ENST00000550987 PMS2P1A4D2B8 440 aa6.13□□□□□ -1.43
CPSF6-206ENST00000550987 RRN3P2A6NIE6 340 aa6.13□□□□□ -1.43
CPSF6-206ENST00000550987 PRRT4C9JH25 899 aa6.13□□□□□ -1.43
CPSF6-206ENST00000550987 EIF3FO00303 357 aaPredicted RBP6.13□□□□□ -1.43
CPSF6-206ENST00000550987 FFAR3O14843 346 aa6.13□□□□□ -1.43
CPSF6-206ENST00000550987 MFAP3LO75121 409 aa6.13□□□□□ -1.43
CPSF6-206ENST00000550987 A1BGP04217 495 aa6.13□□□□□ -1.43
CPSF6-206ENST00000550987 ITGB1P05556 798 aa6.13□□□□□ -1.43
CPSF6-206ENST00000550987 ACVR2AP27037 513 aa6.13□□□□□ -1.43
CPSF6-206ENST00000550987 DDIT3P35638 169 aa6.13□□□□□ -1.43
CPSF6-206ENST00000550987 AFF3P51826 1226 aaKnown RBP6.13□□□□□ -1.43
CPSF6-206ENST00000550987 NHLH1Q02575 133 aa6.13□□□□□ -1.43
CPSF6-206ENST00000550987 FOXO1Q12778 655 aa6.13□□□□□ -1.43
CPSF6-206ENST00000550987 TBX2Q13207 712 aaPredicted RBP6.13□□□□□ -1.43
CPSF6-206ENST00000550987 CNGB1Q14028 1251 aaPredicted RBP6.13□□□□□ -1.43
CPSF6-206ENST00000550987 ARHGEF7Q14155 803 aa6.13□□□□□ -1.43
CPSF6-206ENST00000550987 PLA1AQ53H76 456 aa6.13□□□□□ -1.43
CPSF6-206ENST00000550987 ARL6IP4Q66PJ3 421 aaKnown RBP6.13□□□□□ -1.43
CPSF6-206ENST00000550987 SPTY2D1Q68D10 685 aaPredicted RBP6.13□□□□□ -1.43
CPSF6-206ENST00000550987 MFSD5Q6N075 450 aa6.13□□□□□ -1.43
CPSF6-206ENST00000550987 BORAQ6PGQ7 559 aa6.13□□□□□ -1.43
CPSF6-206ENST00000550987 LAYNQ6UX15 382 aa6.13□□□□□ -1.43
CPSF6-206ENST00000550987 ZDHHC24Q6UX98 284 aa6.13□□□□□ -1.43
CPSF6-206ENST00000550987 USP49Q70CQ1 688 aa6.13□□□□□ -1.43
CPSF6-206ENST00000550987 GATAD2AQ86YP4 633 aa6.13□□□□□ -1.43
CPSF6-206ENST00000550987 RNF169Q8NCN4 708 aa6.13□□□□□ -1.43
CPSF6-206ENST00000550987 FAM71BQ8TC56 605 aa6.13□□□□□ -1.43
CPSF6-206ENST00000550987 STYXQ8WUJ0 223 aa6.13□□□□□ -1.43
CPSF6-206ENST00000550987 BORCS6Q96GS4 357 aa6.13□□□□□ -1.43
CPSF6-206ENST00000550987 TMEM176AQ96HP8 235 aa6.13□□□□□ -1.43
CPSF6-206ENST00000550987 SMOQ99835 787 aa6.13□□□□□ -1.43
CPSF6-206ENST00000550987 SPATA5L1Q9BVQ7 753 aa6.13□□□□□ -1.43
CPSF6-206ENST00000550987 REXO4Q9GZR2 422 aaKnown RBP6.13□□□□□ -1.43
CPSF6-206ENST00000550987 NELFAQ9H3P2 528 aa6.13□□□□□ -1.43
CPSF6-206ENST00000550987 FAM30AQ9NZY2 134 aa6.13□□□□□ -1.43
CPSF6-206ENST00000550987 PGAP2Q9UHJ9 254 aa6.13□□□□□ -1.43
CPSF6-206ENST00000550987 SMG5Q9UPR3 1016 aaKnown RBP6.13□□□□□ -1.43
CPSF6-206ENST00000550987 TBC1D30Q9Y2I9 924 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 391.8 ms