RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 ACADSBP45954 432 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 RABGGTBP53611 331 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 PKN2Q16513 984 aaKnown RBP11.57□□□□□ -0.56
SCG3-202ENST00000542355 C15orf59Q2T9L4 293 aaPredicted RBP11.57□□□□□ -0.56
SCG3-202ENST00000542355 ODF2Q5BJF6 829 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 KCNT1Q5JUK3 1230 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 SH3PXD2AQ5TCZ1 1133 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 LRRC38Q5VT99 294 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 CLEC20AQ6ZU45 233 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 THEM5Q8N1Q8 247 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 PRELID2Q8N945 189 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 EXD1Q8NHP7 514 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 ACSF2Q96CM8 615 aaPredicted RBP11.57□□□□□ -0.56
SCG3-202ENST00000542355 TMEM209Q96SK2 561 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 KCNK16Q96T55 309 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 C11orf49Q9H6J7 331 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 NRDE2Q9H7Z3 1164 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 ZWILCHQ9H900 591 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 ARFGAP3Q9NP61 516 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 KRT82Q9NSB4 513 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 PCSK1NQ9UHG2 260 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 TBX21Q9UL17 535 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 MTUS1Q9ULD2 1270 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 MKI67P46013 3256 aaKnown RBP11.56□□□□□ -0.56
SCG3-202ENST00000542355 ARHGEF37A1IGU5 675 aa11.56□□□□□ -0.56
SCG3-202ENST00000542355 ZSCAN5CA6NGD5 496 aaPredicted RBP11.56□□□□□ -0.56
SCG3-202ENST00000542355 FSCN2O14926 492 aa11.56□□□□□ -0.56
SCG3-202ENST00000542355 AP1G2O75843 785 aa11.56□□□□□ -0.56
SCG3-202ENST00000542355 HEXIM1O94992 359 aaKnown RBP11.56□□□□□ -0.56
SCG3-202ENST00000542355 UPP2O95045 317 aa11.56□□□□□ -0.56
SCG3-202ENST00000542355 RALAP11233 206 aa11.56□□□□□ -0.56
SCG3-202ENST00000542355 MCM3P25205 808 aa11.56□□□□□ -0.56
SCG3-202ENST00000542355 RPL34P49207 117 aaKnown RBP11.56□□□□□ -0.56
SCG3-202ENST00000542355 ATP11AP98196 1134 aa11.56□□□□□ -0.56
SCG3-202ENST00000542355 GUCY2DQ02846 1103 aa11.56□□□□□ -0.56
SCG3-202ENST00000542355 YWHAHQ04917 246 aaPredicted RBP11.56□□□□□ -0.56
SCG3-202ENST00000542355 ACAP1Q15027 740 aa11.56□□□□□ -0.56
SCG3-202ENST00000542355 HADHQ16836 314 aaKnown RBP11.56□□□□□ -0.56
SCG3-202ENST00000542355 CDO1Q16878 200 aa11.56□□□□□ -0.56
SCG3-202ENST00000542355 SMTNL2Q2TAL5 461 aa11.56□□□□□ -0.56
SCG3-202ENST00000542355 ANKS1BQ7Z6G8 1248 aa11.56□□□□□ -0.56
SCG3-202ENST00000542355 FAM35AQ86V20 835 aa11.56□□□□□ -0.56
SCG3-202ENST00000542355 LRRTM3Q86VH5 581 aa11.56□□□□□ -0.56
SCG3-202ENST00000542355 OR10T2Q8NGX3 314 aa11.56□□□□□ -0.56
SCG3-202ENST00000542355 CCDC26Q8TAB7 109 aa11.56□□□□□ -0.56
SCG3-202ENST00000542355 SPATA18Q8TC71 538 aa11.56□□□□□ -0.56
SCG3-202ENST00000542355 NDRG1Q92597 394 aaKnown RBP11.56□□□□□ -0.56
SCG3-202ENST00000542355 MAGOHBQ96A72 148 aaKnown RBP11.56□□□□□ -0.56
SCG3-202ENST00000542355 CFAP57Q96MR6 1250 aa11.56□□□□□ -0.56
SCG3-202ENST00000542355 HERPUD2Q9BSE4 406 aa11.56□□□□□ -0.56
SCG3-202ENST00000542355 EPB41L5Q9HCM4 733 aa11.56□□□□□ -0.56
SCG3-202ENST00000542355 CYLDQ9NQC7 956 aa11.56□□□□□ -0.56
SCG3-202ENST00000542355 ASNSD1Q9NWL6 643 aa11.56□□□□□ -0.56
SCG3-202ENST00000542355 ZNF446Q9NWS9 450 aa11.56□□□□□ -0.56
SCG3-202ENST00000542355 NRP1O14786 923 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 ERLIN1O75477 346 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 KRT1P04264 644 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 ALDH2P05091 517 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 CLTBP09497 229 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 TYMPP19971 482 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 IL1R2P27930 398 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 MIPP30301 263 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 SLC25A11Q02978 314 aaKnown RBP11.55□□□□□ -0.56
SCG3-202ENST00000542355 ADIGQ0VDE8 80 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 LRRC26Q2I0M4 334 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 CCDC14Q49A88 953 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 INTS6LQ5JSJ4 861 aaKnown RBP11.55□□□□□ -0.56
SCG3-202ENST00000542355 FAM171BQ6P995 826 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 CCNI2Q6ZMN8 369 aaPredicted RBP11.55□□□□□ -0.56
SCG3-202ENST00000542355 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.55□□□□□ -0.56
SCG3-202ENST00000542355 MAATS1Q7Z4T9 603 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 NPAS4Q8IUM7 802 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 RCOR2Q8IZ40 523 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 CRIPAKQ8N1N5 446 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 RAPGEF5Q92565 580 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 MYLPFQ96A32 169 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 SMOQ99835 787 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 CNPY3Q9BT09 278 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 RHOBTB2Q9BYZ6 727 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 SLITRK6Q9H5Y7 841 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 LRRC4Q9HBW1 653 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 TMLHEQ9NVH6 421 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 HCSTQ9UBK5 93 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 ESYT3A0FGR9 886 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 TBKBP1A7MCY6 615 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 TMEM189-UBE2V1I3L0A0 370 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 TTI1O43156 1089 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 TRAPPC3O43617 180 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 CETN2P41208 172 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 NDUFV1P49821 464 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 CACNA2D1P54289 1103 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 BCAR1P56945 870 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 SIX1Q15475 284 aaPredicted RBP11.55□□□□□ -0.56
SCG3-202ENST00000542355 PPP2R5EQ16537 467 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 RAB6CQ53S08 254 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 KAZNQ674X7 775 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 MFSD7Q6UXD7 560 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 FAM43BQ6ZT52 329 aaPredicted RBP11.55□□□□□ -0.56
SCG3-202ENST00000542355 SLC26A9Q7LBE3 791 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 GSPT2Q8IYD1 628 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms