RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 LMNAP02545 664 aaKnown RBP18.8■□□□□ 0.6
UBXN1-213ENST00000532904 COL1A2P08123 1366 aa18.8■□□□□ 0.6
UBXN1-213ENST00000532904 CTCFP49711 727 aaPredicted RBP18.8■□□□□ 0.6
UBXN1-213ENST00000532904 NCOA4Q13772 614 aa18.8■□□□□ 0.6
UBXN1-213ENST00000532904 EFTUD2Q15029 972 aaKnown RBP eCLIP18.8■□□□□ 0.68e-7■■■■□ 24.6
UBXN1-213ENST00000532904 SURF1Q15526 300 aa18.8■□□□□ 0.6
UBXN1-213ENST00000532904 FNBP1LQ5T0N5 605 aa18.8■□□□□ 0.6
UBXN1-213ENST00000532904 LRRC71Q8N4P6 559 aa18.8■□□□□ 0.6
UBXN1-213ENST00000532904 BANPQ8N9N5 519 aa18.8■□□□□ 0.6
UBXN1-213ENST00000532904 CFAP61Q8NHU2 1237 aa18.8■□□□□ 0.6
UBXN1-213ENST00000532904 CPT1BQ92523 772 aa18.8■□□□□ 0.6
UBXN1-213ENST00000532904 ALKBH8Q96BT7 664 aaKnown RBP18.8■□□□□ 0.6
UBXN1-213ENST00000532904 ACSF2Q96CM8 615 aaPredicted RBP18.8■□□□□ 0.6
UBXN1-213ENST00000532904 PAFAH2Q99487 392 aa18.8■□□□□ 0.6
UBXN1-213ENST00000532904 FRMD8P1Q9BZ68 369 aaPredicted RBP18.8■□□□□ 0.6
UBXN1-213ENST00000532904 VPS11Q9H270 941 aa18.8■□□□□ 0.6
UBXN1-213ENST00000532904 FZD8Q9H461 694 aa18.8■□□□□ 0.6
UBXN1-213ENST00000532904 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.8■□□□□ 0.6
UBXN1-213ENST00000532904 EFR3BQ9Y2G0 817 aa18.8■□□□□ 0.6
UBXN1-213ENST00000532904 E7ESA3 106 aa18.8■□□□□ 0.6
UBXN1-213ENST00000532904 ABLIM1O14639 778 aa18.8■□□□□ 0.6
UBXN1-213ENST00000532904 OGTO15294 1046 aa18.8■□□□□ 0.6
UBXN1-213ENST00000532904 LGALS2P05162 132 aa18.8■□□□□ 0.6
UBXN1-213ENST00000532904 SRGAP2CP0DJJ0 459 aa18.8■□□□□ 0.6
UBXN1-213ENST00000532904 PROZP22891 400 aa18.8■□□□□ 0.6
UBXN1-213ENST00000532904 SSTR1P30872 391 aa18.8■□□□□ 0.6
UBXN1-213ENST00000532904 GRIK3Q13003 919 aa18.8■□□□□ 0.6
UBXN1-213ENST00000532904 MSS51Q4VC12 460 aa18.8■□□□□ 0.6
UBXN1-213ENST00000532904 ANKRD22Q5VYY1 191 aa18.8■□□□□ 0.6
UBXN1-213ENST00000532904 TSHZ1Q6ZSZ6 1077 aa18.8■□□□□ 0.6
UBXN1-213ENST00000532904 POLNQ7Z5Q5 900 aa18.8■□□□□ 0.6
UBXN1-213ENST00000532904 GPR142Q7Z601 462 aa18.8■□□□□ 0.6
UBXN1-213ENST00000532904 NAT8LQ8N9F0 302 aa18.8■□□□□ 0.6
UBXN1-213ENST00000532904 TTC8Q8TAM2 541 aa18.8■□□□□ 0.6
UBXN1-213ENST00000532904 FAM167BQ9BTA0 163 aa18.8■□□□□ 0.6
UBXN1-213ENST00000532904 NUMBLQ9Y6R0 609 aa18.8■□□□□ 0.6
UBXN1-213ENST00000532904 ACKR2O00590 384 aa18.79■□□□□ 0.6
UBXN1-213ENST00000532904 C22orf31O95567 290 aa18.79■□□□□ 0.6
UBXN1-213ENST00000532904 ATP6V1C1P21283 382 aa18.79■□□□□ 0.6
UBXN1-213ENST00000532904 GAD2Q05329 585 aa18.79■□□□□ 0.6
UBXN1-213ENST00000532904 SEPT7Q16181 437 aaKnown RBP18.79■□□□□ 0.6
UBXN1-213ENST00000532904 EFCAB12Q6NXP0 572 aa18.79■□□□□ 0.6
UBXN1-213ENST00000532904 WDR49Q8IV35 697 aa18.79■□□□□ 0.6
UBXN1-213ENST00000532904 TMEM35BQ8NCS4 154 aa18.79■□□□□ 0.6
UBXN1-213ENST00000532904 RFWD2Q8NHY2 731 aa18.79■□□□□ 0.6
UBXN1-213ENST00000532904 TCP10LQ8TDR4 215 aa18.79■□□□□ 0.6
UBXN1-213ENST00000532904 DCAKDQ8WVC6 231 aa18.79■□□□□ 0.6
UBXN1-213ENST00000532904 WDR83Q9BRX9 315 aaKnown RBP18.79■□□□□ 0.6
UBXN1-213ENST00000532904 TUBB6Q9BUF5 446 aa18.79■□□□□ 0.6
UBXN1-213ENST00000532904 ZNF518BQ9C0D4 1074 aa18.79■□□□□ 0.6
UBXN1-213ENST00000532904 DCLRE1BQ9H816 532 aa18.79■□□□□ 0.6
UBXN1-213ENST00000532904 ZFATQ9P243 1243 aa18.79■□□□□ 0.6
UBXN1-213ENST00000532904 SNAI1O95863 264 aaPredicted RBP18.78■□□□□ 0.6
UBXN1-213ENST00000532904 TSHRP16473 764 aa18.78■□□□□ 0.6
UBXN1-213ENST00000532904 C3orf62Q6ZUJ4 267 aa18.78■□□□□ 0.6
UBXN1-213ENST00000532904 RHPN2Q8IUC4 686 aa18.78■□□□□ 0.6
UBXN1-213ENST00000532904 MIPEPQ99797 713 aa18.78■□□□□ 0.6
UBXN1-213ENST00000532904 OSBPL1AQ9BXW6 950 aa18.78■□□□□ 0.6
UBXN1-213ENST00000532904 RNPEPQ9H4A4 650 aa18.78■□□□□ 0.6
UBXN1-213ENST00000532904 MANSC1Q9H8J5 431 aa18.78■□□□□ 0.6
UBXN1-213ENST00000532904 PTPRHQ9HD43 1115 aa18.78■□□□□ 0.6
UBXN1-213ENST00000532904 ENTPD5O75356 428 aa18.78■□□□□ 0.6
UBXN1-213ENST00000532904 CELF2O95319 508 aaKnown RBP18.78■□□□□ 0.6
UBXN1-213ENST00000532904 HOXD8P13378 290 aaPredicted RBP18.78■□□□□ 0.6
UBXN1-213ENST00000532904 CDH5P33151 784 aaPredicted RBP18.78■□□□□ 0.6
UBXN1-213ENST00000532904 OTUD4Q01804 1114 aaKnown RBP18.78■□□□□ 0.6
UBXN1-213ENST00000532904 PLEKHH3Q7Z736 793 aa18.78■□□□□ 0.6
UBXN1-213ENST00000532904 IFNLR1Q8IU57 520 aaPredicted RBP18.78■□□□□ 0.6
UBXN1-213ENST00000532904 LINC01465Q8N7H1 131 aa18.78■□□□□ 0.6
UBXN1-213ENST00000532904 TTC13Q8NBP0 860 aa18.78■□□□□ 0.6
UBXN1-213ENST00000532904 IMPG2Q9BZV3 1241 aa18.78■□□□□ 0.6
UBXN1-213ENST00000532904 WDR91A4D1P6 747 aa18.77■□□□□ 0.6
UBXN1-213ENST00000532904 TTLL13PA6NNM8 815 aa18.77■□□□□ 0.6
UBXN1-213ENST00000532904 CCDC22O60826 627 aa18.77■□□□□ 0.6
UBXN1-213ENST00000532904 ASS1P00966 412 aaKnown RBP18.77■□□□□ 0.6
UBXN1-213ENST00000532904 BRD2P25440 801 aaKnown RBP18.77■□□□□ 0.6
UBXN1-213ENST00000532904 RPL22P35268 128 aaKnown RBP18.77■□□□□ 0.6
UBXN1-213ENST00000532904 PTDSS1P48651 473 aaKnown RBP18.77■□□□□ 0.6
UBXN1-213ENST00000532904 GDF10P55107 478 aa18.77■□□□□ 0.6
UBXN1-213ENST00000532904 IRF5Q13568 498 aa18.77■□□□□ 0.6
UBXN1-213ENST00000532904 FAM187BQ17R55 369 aa18.77■□□□□ 0.6
UBXN1-213ENST00000532904 SCARA3Q6AZY7 606 aa18.77■□□□□ 0.6
UBXN1-213ENST00000532904 ANO7Q6IWH7 933 aa18.77■□□□□ 0.6
UBXN1-213ENST00000532904 MPZL3Q6UWV2 235 aa18.77■□□□□ 0.6
UBXN1-213ENST00000532904 C4orf50Q6ZRC1 276 aa18.77■□□□□ 0.6
UBXN1-213ENST00000532904 DPP9Q86TI2 863 aa18.77■□□□□ 0.6
UBXN1-213ENST00000532904 WDTC1Q8N5D0 677 aa18.77■□□□□ 0.6
UBXN1-213ENST00000532904 FBXO36Q8NEA4 188 aa18.77■□□□□ 0.6
UBXN1-213ENST00000532904 ACTL9Q8TC94 416 aa18.77■□□□□ 0.6
UBXN1-213ENST00000532904 TRAPPC12Q8WVT3 735 aa18.77■□□□□ 0.6
UBXN1-213ENST00000532904 PTCD3Q96EY7 689 aaKnown RBP18.77■□□□□ 0.6
UBXN1-213ENST00000532904 MAML3Q96JK9 1138 aa18.77■□□□□ 0.6
UBXN1-213ENST00000532904 TCHPQ9BT92 498 aa18.77■□□□□ 0.6
UBXN1-213ENST00000532904 CADM1Q9BY67 442 aaKnown RBP18.77■□□□□ 0.6
UBXN1-213ENST00000532904 TRIM55Q9BYV6 548 aa18.77■□□□□ 0.6
UBXN1-213ENST00000532904 SLC24A3Q9HC58 644 aa18.77■□□□□ 0.6
UBXN1-213ENST00000532904 SLC17A7Q9P2U7 560 aa18.77■□□□□ 0.6
UBXN1-213ENST00000532904 DCTN4Q9UJW0 460 aa18.77■□□□□ 0.6
UBXN1-213ENST00000532904 CPSF3Q9UKF6 684 aaKnown RBP18.77■□□□□ 0.6
UBXN1-213ENST00000532904 SLC15A5A6NIM6 579 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms