RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 PTGISQ16647 500 aa13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 SIAH1Q8IUQ4 282 aa13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 SHCBP1Q8NEM2 672 aa13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 ADAM32Q8TC27 787 aa13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 SEMA4DQ92854 862 aa13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 ADAM2Q99965 735 aa13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 APOL2Q9BQE5 337 aa13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 MUC3BQ9H195 1237 aa13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 TRPV2Q9Y5S1 764 aa13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 GYG2O15488 501 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 ATXN8OSP0DMR3 200 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 CCDC130P13994 396 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 NFKBIAP25963 317 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 SNX17Q15036 470 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 MROH9Q5TGP6 573 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 MTHFD1LQ6UB35 978 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 TUBB6Q9BUF5 446 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 HSD3B7Q9H2F3 369 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 C20orf96Q9NUD7 363 aaPredicted RBP13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 TLR2O60603 784 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 SNX2O60749 519 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 FAM153BP0C7A2 387 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 MAP7Q14244 749 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 FAM153CQ494X1 144 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 FBXW10Q5XX13 1052 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 FOXR2Q6PJQ5 311 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 SPATA21Q7Z572 469 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 ZNF473Q8WTR7 871 aaKnown RBP13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 SEPT8Q92599 483 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 PTPRN2Q92932 1015 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 PPWD1Q96BP3 646 aaKnown RBP13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 STAMBPL1Q96FJ0 436 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 LRGUKQ96M69 825 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 PGLYRP2Q96PD5 576 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 SUDS3Q9H7L9 328 aaPredicted RBP13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 FAM153AQ9UHL3 310 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 CNTNAP2Q9UHC6 1331 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 C5P01031 1676 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 H0Y3Z8 333 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 F9P00740 461 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 MARCKSL1P49006 195 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 SCNN1GP51170 649 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 EFEMP1Q12805 493 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 USP10Q14694 798 aaKnown RBP13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 STKLD1Q8NE28 680 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 RNPEPQ9H4A4 650 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 ETNK1Q9HBU6 452 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 SOWAHBA6NEL2 793 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 TRIM49D1C9J1S8 452 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 POLBP06746 335 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 SNRPAP09012 282 aaKnown RBP13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 ARF4P18085 180 aaPredicted RBP13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 MIPP30301 263 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 AXLP30530 894 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 MARSP56192 900 aaKnown RBP13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 ZCWPW2Q504Y3 356 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 FBXO36Q8NEA4 188 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 LENG9Q96B70 501 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 DDX27Q96GQ7 796 aaKnown RBP13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 MYCBPQ99417 103 aaPredicted RBP13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 DDX50Q9BQ39 737 aaKnown RBP13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 CDY2AQ9Y6F7 541 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 MRPL42Q9Y6G3 142 aaKnown RBP13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 ALS2Q96Q42 1657 aa13.59□□□□□ -0.23
PCDHGB1-201ENST00000523390 DOT1LQ8TEK3 1739 aa13.58□□□□□ -0.23
PCDHGB1-201ENST00000523390 SMAPO00193 183 aa13.58□□□□□ -0.23
PCDHGB1-201ENST00000523390 HARS2P49590 506 aaKnown RBP13.58□□□□□ -0.23
PCDHGB1-201ENST00000523390 KCTD19Q17RG1 926 aaPredicted RBP13.58□□□□□ -0.23
PCDHGB1-201ENST00000523390 KIF19Q2TAC6 998 aa13.58□□□□□ -0.23
PCDHGB1-201ENST00000523390 CHADLQ6NUI6 762 aa13.58□□□□□ -0.23
PCDHGB1-201ENST00000523390 C3orf20Q8ND61 904 aa13.58□□□□□ -0.23
PCDHGB1-201ENST00000523390 SGSM3Q96HU1 749 aa13.58□□□□□ -0.23
PCDHGB1-201ENST00000523390 CEP41Q9BYV8 373 aa13.58□□□□□ -0.23
PCDHGB1-201ENST00000523390 DCLK3Q9C098 648 aa13.58□□□□□ -0.23
PCDHGB1-201ENST00000523390 CHST7Q9NS84 486 aa13.58□□□□□ -0.23
PCDHGB1-201ENST00000523390 NDFIP2Q9NV92 336 aa13.58□□□□□ -0.23
PCDHGB1-201ENST00000523390 FGFR1OP2Q9NVK5 253 aa13.58□□□□□ -0.23
PCDHGB1-201ENST00000523390 PSD3Q9NYI0 1048 aa13.58□□□□□ -0.23
PCDHGB1-201ENST00000523390 WHRNQ9P202 907 aa13.58□□□□□ -0.23
PCDHGB1-201ENST00000523390 DUOX1Q9NRD9 1551 aa13.58□□□□□ -0.24
PCDHGB1-201ENST00000523390 SPECC1L-ADORA2AF8WAN1 911 aa13.58□□□□□ -0.24
PCDHGB1-201ENST00000523390 FZD9O00144 591 aa13.58□□□□□ -0.24
PCDHGB1-201ENST00000523390 MTSS1O43312 755 aa13.58□□□□□ -0.24
PCDHGB1-201ENST00000523390 CAND2O75155 1236 aa13.58□□□□□ -0.24
PCDHGB1-201ENST00000523390 RPLP2P05387 115 aaKnown RBP13.58□□□□□ -0.24
PCDHGB1-201ENST00000523390 MLH1P40692 756 aa13.58□□□□□ -0.24
PCDHGB1-201ENST00000523390 INHBEP58166 350 aa13.58□□□□□ -0.24
PCDHGB1-201ENST00000523390 DAB2IPQ5VWQ8 1189 aa13.58□□□□□ -0.24
PCDHGB1-201ENST00000523390 NT5DC4Q86YG4 428 aa13.58□□□□□ -0.24
PCDHGB1-201ENST00000523390 SENP8Q96LD8 212 aa13.58□□□□□ -0.24
PCDHGB1-201ENST00000523390 XAB2Q9HCS7 855 aaKnown RBP13.58□□□□□ -0.24
PCDHGB1-201ENST00000523390 MOSPD1Q9UJG1 213 aa13.58□□□□□ -0.24
PCDHGB1-201ENST00000523390 RAB21Q9UL25 225 aa13.58□□□□□ -0.24
PCDHGB1-201ENST00000523390 ATP11BQ9Y2G3 1177 aa13.58□□□□□ -0.24
PCDHGB1-201ENST00000523390 TRIM17Q9Y577 477 aa13.58□□□□□ -0.24
PCDHGB1-201ENST00000523390 RPS6KL1Q9Y6S9 549 aa13.58□□□□□ -0.24
PCDHGB1-201ENST00000523390 A0A0B4J269 797 aa13.58□□□□□ -0.24
PCDHGB1-201ENST00000523390 SPAG6O75602 509 aa13.58□□□□□ -0.24
PCDHGB1-201ENST00000523390 CYBBP04839 570 aa13.58□□□□□ -0.24
PCDHGB1-201ENST00000523390 RPSAP08865 295 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms