RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-222	ENST00000514006	EFCAB8	A8MWE9	144 aa		5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006		E7EVH7	732 aa		5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	TCERG1	O14776	1098 aa	Known RBP	5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	FIBP	O43427	364 aa		5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	ZNF500	O60304	480 aa	Predicted RBP	5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	ZSCAN22	P10073	491 aa	Predicted RBP	5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	HGF	P14210	728 aa		5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	HK1	P19367	917 aa		5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	PRKAR1B	P31321	381 aa		5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	PRKG2	Q13237	762 aa		5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	NBPF8	Q3BBV2	869 aa		5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	GPATCH4	Q5T3I0	446 aa	Known RBP	5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	TSHZ3	Q63HK5	1081 aa		5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	RINL	Q6ZS11	566 aa		5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	ARHGEF18	Q6ZSZ5	1173 aa		5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	BBS12	Q6ZW61	710 aa		5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	ANKS1B	Q7Z6G8	1248 aa		5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	PLEKHH3	Q7Z736	793 aa		5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	TMTC2	Q8N394	836 aa		5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	MB21D1	Q8N884	522 aa		5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	LINC01356	Q8N9X3	169 aa		5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	MDGA1	Q8NFP4	955 aa		5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	SNRNP27	Q8WVK2	155 aa	Known RBP	5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	ZDHHC12	Q96GR4	267 aa		5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	LRIG1	Q96JA1	1093 aa		5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	PLEKHA5	Q9HAU0	1116 aa		5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	GBA2	Q9HCG7	927 aa	Predicted RBP	5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	FSCN3	Q9NQT6	498 aa		5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	PI4KB	Q9UBF8	816 aa		5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	AASS	Q9UDR5	926 aa		5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	VPS51	Q9UID3	782 aa		5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	SLC45A1	Q9Y2W3	748 aa		5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	DERA	Q9Y315	318 aa		5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	NEU2	Q9Y3R4	380 aa		5.67	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	ANKRD18B	A2A2Z9	1011 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006		A6NCN8	305 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	FAM90A18P	A6NE21	464 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	FAM90A16P	A6NEW6	464 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	FAM90A9P	A6NNJ1	464 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	FAM90A5P	A8MXJ8	464 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006		K7ENM7	598 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	TOR1B	O14657	336 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	TAF5L	O75529	589 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	HNRNPA1	P09651	372 aa	Known RBP eCLIP	5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	FAM90A15P	P0C7V4	464 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	FAM90A14P	P0C7W9	464 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	KCNA2	P16389	499 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	SERPINA4	P29622	427 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	MCM2	P49736	904 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	IRAK1	P51617	712 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	PGD	P52209	483 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	E2F2	Q14209	437 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	CSHL1	Q14406	222 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	ANKRD1	Q15327	319 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	CERCAM	Q5T4B2	595 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	ARHGAP40	Q5TG30	622 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	TTLL5	Q6EMB2	1281 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	RGS7BP	Q6MZT1	257 aa	Predicted RBP	5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	SYT12	Q8IV01	421 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	RHOT2	Q8IXI1	618 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	SP8	Q8IXZ3	490 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	SLC15A3	Q8IY34	581 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	TMEM171	Q8WVE6	324 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	RFFL	Q8WZ73	363 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	ST8SIA4	Q92187	359 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	CENPI	Q92674	756 aa	Predicted RBP	5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	HIST1H2AA	Q96QV6	131 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	MPHOSPH9	Q99550	1183 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	BARD1	Q99728	777 aa	Known RBP	5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	NUDT22	Q9BRQ3	303 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	TTPAL	Q9BTX7	342 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	PAIP1	Q9H074	479 aa	Known RBP	5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	RNPEP	Q9H4A4	650 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	CLIC5	Q9NZA1	410 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	VSX1	Q9NZR4	365 aa	Predicted RBP	5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	CTTNBP2NL	Q9P2B4	639 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	HSFX1	Q9UBD0	423 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	POLG2	Q9UHN1	485 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	NDRG4	Q9ULP0	352 aa	Known RBP	5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	NFU1	Q9UMS0	254 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	USP22	Q9UPT9	525 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	CNTN6	Q9UQ52	1028 aa		5.66	□□□□□ -1.5
CALCOCO2-222	ENST00000514006		E7ENX8	843 aa		5.65	□□□□□ -1.5
CALCOCO2-222	ENST00000514006		F5H0A9	414 aa	Predicted RBP	5.65	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	DHH	O43323	396 aa		5.65	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	RPP40	O75818	363 aa	Known RBP	5.65	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	SUN1	O94901	812 aa		5.65	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	LMNA	P02545	664 aa	Known RBP	5.65	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	CNP	P09543	421 aa	Known RBP	5.65	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	YY1	P25490	414 aa		5.65	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	PPIF	P30405	207 aa	Known RBP	5.65	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	ZEB1	P37275	1124 aa	Predicted RBP	5.65	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	RBM5	P52756	815 aa	Known RBP eCLIP	5.65	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	NAP1L1	P55209	391 aa	Known RBP	5.65	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	CASP6	P55212	293 aa		5.65	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	PPP2CB	P62714	309 aa		5.65	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	PPP2CA	P67775	309 aa		5.65	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	TAP2	Q03519	686 aa		5.65	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms