RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 ZNF840PA6NDX5 716 aa12.52□□□□□ -0.41
MDC1-207ENST00000492462 KINO60870 393 aaKnown RBP12.52□□□□□ -0.41
MDC1-207ENST00000492462 BEST1O76090 585 aa12.52□□□□□ -0.41
MDC1-207ENST00000492462 CKMP06732 381 aa12.52□□□□□ -0.41
MDC1-207ENST00000492462 EPB41P11171 864 aaKnown RBP12.52□□□□□ -0.41
MDC1-207ENST00000492462 CHRNB1P11230 501 aa12.52□□□□□ -0.41
MDC1-207ENST00000492462 CD58P19256 250 aa12.52□□□□□ -0.41
MDC1-207ENST00000492462 ENPEPQ07075 957 aa12.52□□□□□ -0.41
MDC1-207ENST00000492462 GAS6Q14393 721 aa12.52□□□□□ -0.41
MDC1-207ENST00000492462 ZNF268Q14587 947 aaPredicted RBP12.52□□□□□ -0.41
MDC1-207ENST00000492462 ZNF77Q15935 545 aa12.52□□□□□ -0.41
MDC1-207ENST00000492462 NAIF1Q69YI7 327 aaPredicted RBP12.52□□□□□ -0.41
MDC1-207ENST00000492462 CRYBG2Q8N1P7 616 aa12.52□□□□□ -0.41
MDC1-207ENST00000492462 ZMIZ2Q8NF64 920 aa12.52□□□□□ -0.41
MDC1-207ENST00000492462 SCAMP5Q8TAC9 235 aa12.52□□□□□ -0.41
MDC1-207ENST00000492462 SLC2A14Q8TDB8 520 aa12.52□□□□□ -0.41
MDC1-207ENST00000492462 WHAMMQ8TF30 809 aa12.52□□□□□ -0.41
MDC1-207ENST00000492462 TNIP3Q96KP6 325 aa12.52□□□□□ -0.41
MDC1-207ENST00000492462 SMOQ99835 787 aa12.52□□□□□ -0.41
MDC1-207ENST00000492462 NIF3L1Q9GZT8 377 aa12.52□□□□□ -0.41
MDC1-207ENST00000492462 C8orf33Q9H7E9 229 aaPredicted RBP12.52□□□□□ -0.41
MDC1-207ENST00000492462 KIF9Q9HAQ2 790 aa12.52□□□□□ -0.41
MDC1-207ENST00000492462 KRT82Q9NSB4 513 aa12.52□□□□□ -0.41
MDC1-207ENST00000492462 TRPM5Q9NZQ8 1165 aa12.52□□□□□ -0.41
MDC1-207ENST00000492462 OTOGLQ3ZCN5 2332 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 MYOFQ9NZM1 2061 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 SOBPA7XYQ1 873 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 PPP1R3GB7ZBB8 358 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 BIN1O00499 593 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 TNFRSF10BO14763 440 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 SCAMP3O14828 347 aaKnown RBP12.51□□□□□ -0.41
MDC1-207ENST00000492462 NCAM2O15394 837 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 AP1G2O75843 785 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 ABL1P00519 1130 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 USP17L7P0C7H9 530 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 P4HA1P13674 534 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 HDCP19113 662 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 ADORA2BP29275 332 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 HOXC13P31276 330 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 GTF2H1P32780 548 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 RPS9P46781 194 aaKnown RBP12.51□□□□□ -0.41
MDC1-207ENST00000492462 PGFP49763 221 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 MXI1P50539 228 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 MLLT6P55198 1093 aaPredicted RBP12.51□□□□□ -0.41
MDC1-207ENST00000492462 PLCB2Q00722 1185 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 INCA1Q0VD86 236 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 USP4Q13107 963 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 MTF1Q14872 753 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 PON2Q15165 354 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 ITPRIPL2Q3MIP1 535 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 CBWD6Q4V339 395 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 CBWD3Q5JTY5 395 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 CBWD5Q5RIA9 395 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 KRT39Q6A163 491 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 Q6ZS52 159 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 UNC93AQ86WB7 457 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 RALGPS2Q86X27 583 aaPredicted RBP12.51□□□□□ -0.41
MDC1-207ENST00000492462 ELOA2Q8IYF1 753 aaPredicted RBP12.51□□□□□ -0.41
MDC1-207ENST00000492462 NUP93Q8N1F7 819 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 SH3RF2Q8TEC5 729 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 TATDN2Q93075 761 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 CEP295NLQ96MC4 621 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 TSG101Q99816 390 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 ARID3AQ99856 593 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 DUSP9Q99956 384 aaKnown RBP12.51□□□□□ -0.41
MDC1-207ENST00000492462 RNF38Q9H0F5 515 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 CHRDQ9H2X0 955 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 C2orf42Q9NWW7 574 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 THG1LQ9NWX6 298 aaKnown RBP12.51□□□□□ -0.41
MDC1-207ENST00000492462 WNT6Q9Y6F9 365 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 MYO16Q9Y6X6 1858 aa12.51□□□□□ -0.41
MDC1-207ENST00000492462 FRYLO94915 3013 aa12.5□□□□□ -0.41
MDC1-207ENST00000492462 LAMTOR5O43504 91 aa12.5□□□□□ -0.41
MDC1-207ENST00000492462 SLC5A3P53794 718 aa12.5□□□□□ -0.41
MDC1-207ENST00000492462 MAP3K7CLP57077 242 aa12.5□□□□□ -0.41
MDC1-207ENST00000492462 FKBP3Q00688 224 aaKnown RBP12.5□□□□□ -0.41
MDC1-207ENST00000492462 CSTF1Q05048 431 aaKnown RBP12.5□□□□□ -0.41
MDC1-207ENST00000492462 LRRC63Q05C16 580 aa12.5□□□□□ -0.41
MDC1-207ENST00000492462 RUNX3Q13761 415 aa12.5□□□□□ -0.41
MDC1-207ENST00000492462 MORC3Q14149 939 aa12.5□□□□□ -0.41
MDC1-207ENST00000492462 DCAF17Q5H9S7 520 aaPredicted RBP12.5□□□□□ -0.41
MDC1-207ENST00000492462 TCERG1LQ5VWI1 586 aa12.5□□□□□ -0.41
MDC1-207ENST00000492462 KLHL10Q6JEL2 608 aa12.5□□□□□ -0.41
MDC1-207ENST00000492462 GPRIN1Q7Z2K8 1008 aa12.5□□□□□ -0.41
MDC1-207ENST00000492462 FBXL13Q8NEE6 735 aa12.5□□□□□ -0.41
MDC1-207ENST00000492462 SMARCD1Q96GM5 515 aa12.5□□□□□ -0.41
MDC1-207ENST00000492462 IMPG2Q9BZV3 1241 aa12.5□□□□□ -0.41
MDC1-207ENST00000492462 LINC00597Q9H2U6 94 aa12.5□□□□□ -0.41
MDC1-207ENST00000492462 CYP3A43Q9HB55 503 aa12.5□□□□□ -0.41
MDC1-207ENST00000492462 FBRSL1Q9HCM7 1045 aaKnown RBP12.5□□□□□ -0.41
MDC1-207ENST00000492462 DMAP1Q9NPF5 467 aaPredicted RBP12.5□□□□□ -0.41
MDC1-207ENST00000492462 RAB20Q9NX57 234 aa12.5□□□□□ -0.41
MDC1-207ENST00000492462 SMPD4Q9NXE4 827 aa12.5□□□□□ -0.41
MDC1-207ENST00000492462 IL37Q9NZH6 218 aa12.5□□□□□ -0.41
MDC1-207ENST00000492462 CHORDC1Q9UHD1 332 aaPredicted RBP12.5□□□□□ -0.41
MDC1-207ENST00000492462 HOOK1Q9UJC3 728 aaKnown RBP12.5□□□□□ -0.41
MDC1-207ENST00000492462 ARHGAP26Q9UNA1 814 aa12.5□□□□□ -0.41
MDC1-207ENST00000492462 ATP8B3O60423 1300 aa12.49□□□□□ -0.41
MDC1-207ENST00000492462 PSMA7O14818 248 aa12.49□□□□□ -0.41
MDC1-207ENST00000492462 SLC16A3O15427 465 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms