RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 ITPRIPL2Q3MIP1 535 aa11.75□□□□□ -0.53
TMEM39A-211ENST00000491685 ZCWPW2Q504Y3 356 aa11.75□□□□□ -0.53
TMEM39A-211ENST00000491685 PRR23BQ6ZRT6 265 aa11.75□□□□□ -0.53
TMEM39A-211ENST00000491685 LIMS2Q7Z4I7 341 aa11.75□□□□□ -0.53
TMEM39A-211ENST00000491685 CCDC150Q8NCX0 1101 aa11.75□□□□□ -0.53
TMEM39A-211ENST00000491685 ANKRD20A12PQ8NF67 263 aa11.75□□□□□ -0.53
TMEM39A-211ENST00000491685 ENOX1Q8TC92 643 aaKnown RBP11.75□□□□□ -0.53
TMEM39A-211ENST00000491685 PARD3BQ8TEW8 1205 aa11.75□□□□□ -0.53
TMEM39A-211ENST00000491685 EXOC4Q96A65 974 aa11.75□□□□□ -0.53
TMEM39A-211ENST00000491685 RTKNQ9BST9 563 aa11.75□□□□□ -0.53
TMEM39A-211ENST00000491685 TRPC7Q9HCX4 862 aa11.75□□□□□ -0.53
TMEM39A-211ENST00000491685 ABCB6Q9NP58 842 aa11.75□□□□□ -0.53
TMEM39A-211ENST00000491685 ARMCX3Q9UH62 379 aaPredicted RBP11.75□□□□□ -0.53
TMEM39A-211ENST00000491685 C2orf78A6NCI8 922 aa11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 BECN2A8MW95 431 aa11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 AKAP3O75969 853 aa11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 PAPSS2O95340 614 aaPredicted RBP11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 EGFP01133 1207 aa11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 ADRB1P08588 477 aa11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 CDK11BP21127 795 aaKnown RBP11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 GTF2H1P32780 548 aa11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 NRLP54845 237 aa11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 USP46P62068 366 aa11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 TPM4P67936 248 aa11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 PLCB2Q00722 1185 aa11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 SPEM2Q0P670 501 aa11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 USP4Q13107 963 aa11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 RUNX3Q13761 415 aa11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 ZNF77Q15935 545 aa11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 CFAP221Q4G0U5 840 aa11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 DGKKQ5KSL6 1271 aa11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 TTI2Q6NXR4 508 aa11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 FAM171BQ6P995 826 aa11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 MON1AQ86VX9 555 aa11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 SPATA2LQ8IUW3 424 aaPredicted RBP11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 SCN4BQ8IWT1 228 aa11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 SPATA18Q8TC71 538 aa11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 MRPS31Q92665 395 aaKnown RBP11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 EZH1Q92800 747 aaPredicted RBP11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 TRMT2BQ96GJ1 504 aaKnown RBP11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 HPDLQ96IR7 371 aa11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 MYRFLQ96LU7 910 aa11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 CYP2S1Q96SQ9 504 aa11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 SYT15Q9BQS2 421 aa11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 MRPL45Q9BRJ2 306 aaKnown RBP11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 FBRSL1Q9HCM7 1045 aaKnown RBP11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 TDP1Q9NUW8 608 aa11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 TMEM30AQ9NV96 361 aa11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 USP18Q9UMW8 372 aa11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 WNT6Q9Y6F9 365 aa11.74□□□□□ -0.53
TMEM39A-211ENST00000491685 BAHCC1Q9P281 2608 aa11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 TRIM49BA6NDI0 452 aa11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 ANTXRLA6NF34 631 aa11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 CST3P01034 146 aaPredicted RBP11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 WARSP23381 471 aaKnown RBP11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 DDX6P26196 483 aaKnown RBP eCLIP11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 ATICP31939 592 aa11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 LHX1P48742 406 aa11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 PXNP49023 591 aaPredicted RBP11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 CASP4P49662 377 aa11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 CACNA2D1P54289 1103 aa11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 RPL10AP62906 217 aaKnown RBP11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 ZXDBP98169 803 aa11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 TYRO3Q06418 890 aa11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 BIRC3Q13489 604 aa11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 SIM2Q14190 667 aaPredicted RBP11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 MTF1Q14872 753 aa11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 SGSM1Q2NKQ1 1148 aa11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 DPCR1Q3MIW9 517 aa11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 TMEM196Q5HYL7 178 aa11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 TCERG1LQ5VWI1 586 aa11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 TRAPPC11Q7Z392 1133 aa11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 LONP2Q86WA8 852 aa11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 TTC16Q8NEE8 873 aa11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 PLEKHO2Q8TD55 490 aa11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 ZNF516Q92618 1163 aa11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 ELMO3Q96BJ8 720 aa11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 CGRRF1Q99675 332 aa11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 DNAI2Q9GZS0 605 aa11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 DPEP3Q9H4B8 488 aa11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 THAP9Q9H5L6 903 aa11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 KIF9Q9HAQ2 790 aa11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 THG1LQ9NWX6 298 aaKnown RBP11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 MYOFQ9NZM1 2061 aa11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 GCNT4Q9P109 453 aa11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 GMEB2Q9UKD1 530 aa11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.73□□□□□ -0.53
TMEM39A-211ENST00000491685 MYH10P35580 1976 aa11.72□□□□□ -0.53
TMEM39A-211ENST00000491685 SYCE3A1L190 88 aa11.72□□□□□ -0.53
TMEM39A-211ENST00000491685 SOBPA7XYQ1 873 aa11.72□□□□□ -0.53
TMEM39A-211ENST00000491685 CLSTN1O94985 981 aa11.72□□□□□ -0.53
TMEM39A-211ENST00000491685 PDGFRBP09619 1106 aa11.72□□□□□ -0.53
TMEM39A-211ENST00000491685 P4HA1P13674 534 aa11.72□□□□□ -0.53
TMEM39A-211ENST00000491685 BDNFP23560 247 aa11.72□□□□□ -0.53
TMEM39A-211ENST00000491685 PCSK1P29120 753 aa11.72□□□□□ -0.53
TMEM39A-211ENST00000491685 MAGEA11P43364 429 aa11.72□□□□□ -0.53
TMEM39A-211ENST00000491685 PMS1P54277 932 aaKnown RBP11.72□□□□□ -0.53
TMEM39A-211ENST00000491685 CLDN10P78369 228 aa11.72□□□□□ -0.53
TMEM39A-211ENST00000491685 AMPD2Q01433 879 aa11.72□□□□□ -0.53
TMEM39A-211ENST00000491685 ZNF268Q14587 947 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms