RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 EP300Q09472 2414 aaPredicted RBP19.13■□□□□ 0.65
HMGN1-219ENST00000491183 GVINP1Q7Z2Y8 2422 aa19.12■□□□□ 0.65
HMGN1-219ENST00000491183 OTOGLQ3ZCN5 2332 aa19.12■□□□□ 0.65
HMGN1-219ENST00000491183 ATG2BQ96BY7 2078 aa19.12■□□□□ 0.65
HMGN1-219ENST00000491183 K7ESF4 209 aa19.12■□□□□ 0.65
HMGN1-219ENST00000491183 TNFRSF10BO14763 440 aa19.12■□□□□ 0.65
HMGN1-219ENST00000491183 PAPSS2O95340 614 aaPredicted RBP19.12■□□□□ 0.65
HMGN1-219ENST00000491183 OLFM2O95897 454 aa19.12■□□□□ 0.65
HMGN1-219ENST00000491183 P4HA1P13674 534 aa19.12■□□□□ 0.65
HMGN1-219ENST00000491183 RPL13P26373 211 aaKnown RBP19.12■□□□□ 0.65
HMGN1-219ENST00000491183 GJA4P35212 333 aa19.12■□□□□ 0.65
HMGN1-219ENST00000491183 IFNAR2P48551 515 aa19.12■□□□□ 0.65
HMGN1-219ENST00000491183 NRLP54845 237 aa19.12■□□□□ 0.65
HMGN1-219ENST00000491183 IFRD2Q12894 506 aaPredicted RBP19.12■□□□□ 0.65
HMGN1-219ENST00000491183 PPP2R5DQ14738 602 aa19.12■□□□□ 0.65
HMGN1-219ENST00000491183 PKN3Q6P5Z2 889 aa19.12■□□□□ 0.65
HMGN1-219ENST00000491183 TAS1R2Q8TE23 839 aa19.12■□□□□ 0.65
HMGN1-219ENST00000491183 EEF2KMTQ96G04 330 aa19.12■□□□□ 0.65
HMGN1-219ENST00000491183 MED10Q9BTT4 135 aa19.12■□□□□ 0.65
HMGN1-219ENST00000491183 APOBEC3GQ9HC16 384 aaKnown RBP19.12■□□□□ 0.65
HMGN1-219ENST00000491183 IL37Q9NZH6 218 aa19.12■□□□□ 0.65
HMGN1-219ENST00000491183 LEFTY2O00292 366 aa19.11■□□□□ 0.65
HMGN1-219ENST00000491183 BEST1O76090 585 aa19.11■□□□□ 0.65
HMGN1-219ENST00000491183 ABL1P00519 1130 aa19.11■□□□□ 0.65
HMGN1-219ENST00000491183 OAS1P00973 400 aaKnown RBP19.11■□□□□ 0.65
HMGN1-219ENST00000491183 KRT13P13646 458 aa19.11■□□□□ 0.65
HMGN1-219ENST00000491183 CCDC130P13994 396 aa19.11■□□□□ 0.65
HMGN1-219ENST00000491183 YWHAQP27348 245 aa19.11■□□□□ 0.65
HMGN1-219ENST00000491183 PRCPP42785 496 aa19.11■□□□□ 0.65
HMGN1-219ENST00000491183 PDE6CP51160 858 aa19.11■□□□□ 0.65
HMGN1-219ENST00000491183 SLC7A9P82251 487 aa19.11■□□□□ 0.65
HMGN1-219ENST00000491183 ENPEPQ07075 957 aa19.11■□□□□ 0.65
HMGN1-219ENST00000491183 EDRF1Q3B7T1 1238 aa19.11■□□□□ 0.65
HMGN1-219ENST00000491183 UNC93AQ86WB7 457 aa19.11■□□□□ 0.65
HMGN1-219ENST00000491183 CPA6Q8N4T0 437 aa19.11■□□□□ 0.65
HMGN1-219ENST00000491183 C12orf29Q8N999 325 aa19.11■□□□□ 0.65
HMGN1-219ENST00000491183 ZMIZ2Q8NF64 920 aa19.11■□□□□ 0.65
HMGN1-219ENST00000491183 SCAMP5Q8TAC9 235 aa19.11■□□□□ 0.65
HMGN1-219ENST00000491183 SLITRK1Q96PX8 696 aa19.11■□□□□ 0.65
HMGN1-219ENST00000491183 CHORDC1Q9UHD1 332 aaPredicted RBP19.11■□□□□ 0.65
HMGN1-219ENST00000491183 ATP8B3O60423 1300 aa19.1■□□□□ 0.65
HMGN1-219ENST00000491183 CHURC1-FNTBB4DL54 471 aa19.1■□□□□ 0.65
HMGN1-219ENST00000491183 RTN3O95197 1032 aaPredicted RBP19.1■□□□□ 0.65
HMGN1-219ENST00000491183 EGFP01133 1207 aa19.1■□□□□ 0.65
HMGN1-219ENST00000491183 FNTBP49356 437 aa19.1■□□□□ 0.65
HMGN1-219ENST00000491183 AMPD2Q01433 879 aa19.1■□□□□ 0.65
HMGN1-219ENST00000491183 GRSF1Q12849 480 aaKnown RBP eCLIP19.1■□□□□ 0.65
HMGN1-219ENST00000491183 ERCC4Q92889 916 aaPredicted RBP19.1■□□□□ 0.65
HMGN1-219ENST00000491183 ATP2A3Q93084 1043 aa19.1■□□□□ 0.65
HMGN1-219ENST00000491183 SMARCD1Q96GM5 515 aa19.1■□□□□ 0.65
HMGN1-219ENST00000491183 TWNKQ96RR1 684 aa19.1■□□□□ 0.65
HMGN1-219ENST00000491183 SMOQ99835 787 aa19.1■□□□□ 0.65
HMGN1-219ENST00000491183 MMRN2Q9H8L6 949 aa19.1■□□□□ 0.65
HMGN1-219ENST00000491183 CSNK1G1Q9HCP0 422 aa19.1■□□□□ 0.65
HMGN1-219ENST00000491183 DMAP1Q9NPF5 467 aaPredicted RBP19.1■□□□□ 0.65
HMGN1-219ENST00000491183 SMG5Q9UPR3 1016 aaKnown RBP19.1■□□□□ 0.65
HMGN1-219ENST00000491183 MYH10P35580 1976 aa19.1■□□□□ 0.65
HMGN1-219ENST00000491183 GPR179Q6PRD1 2367 aa19.1■□□□□ 0.65
HMGN1-219ENST00000491183 GOLGA6L4A6NEF3 574 aa19.09■□□□□ 0.65
HMGN1-219ENST00000491183 HRO43593 1189 aa19.09■□□□□ 0.65
HMGN1-219ENST00000491183 AP1G2O75843 785 aa19.09■□□□□ 0.65
HMGN1-219ENST00000491183 SLC5A3P53794 718 aa19.09■□□□□ 0.65
HMGN1-219ENST00000491183 INCA1Q0VD86 236 aa19.09■□□□□ 0.65
HMGN1-219ENST00000491183 ZNF658Q5TYW1 1059 aaPredicted RBP19.09■□□□□ 0.65
HMGN1-219ENST00000491183 KIAA2013Q8IYS2 634 aa19.09■□□□□ 0.65
HMGN1-219ENST00000491183 SPATA20Q8TB22 786 aa19.09■□□□□ 0.65
HMGN1-219ENST00000491183 SLC2A14Q8TDB8 520 aa19.09■□□□□ 0.65
HMGN1-219ENST00000491183 EZH1Q92800 747 aaPredicted RBP19.09■□□□□ 0.65
HMGN1-219ENST00000491183 SEMA4DQ92854 862 aa19.09■□□□□ 0.65
HMGN1-219ENST00000491183 FBXO32Q969P5 355 aa19.09■□□□□ 0.65
HMGN1-219ENST00000491183 CCDC34Q96HJ3 373 aa19.09■□□□□ 0.65
HMGN1-219ENST00000491183 GSDMAQ96QA5 445 aa19.09■□□□□ 0.65
HMGN1-219ENST00000491183 P2RY13Q9BPV8 354 aa19.09■□□□□ 0.65
HMGN1-219ENST00000491183 HINFPQ9BQA5 517 aa19.09■□□□□ 0.65
HMGN1-219ENST00000491183 TMEM8AQ9HCN3 771 aa19.09■□□□□ 0.65
HMGN1-219ENST00000491183 KRT82Q9NSB4 513 aa19.09■□□□□ 0.65
HMGN1-219ENST00000491183 FAM49BQ9NUQ9 324 aa19.09■□□□□ 0.65
HMGN1-219ENST00000491183 SMPD4Q9NXE4 827 aa19.09■□□□□ 0.65
HMGN1-219ENST00000491183 PCDHA5Q9Y5H7 936 aa19.09■□□□□ 0.65
HMGN1-219ENST00000491183 CPQQ9Y646 472 aa19.09■□□□□ 0.65
HMGN1-219ENST00000491183 ZNF292O60281 2723 aa19.08■□□□□ 0.65
HMGN1-219ENST00000491183 FAM92AA1XBS5 289 aa19.08■□□□□ 0.64
HMGN1-219ENST00000491183 GTF2H1P32780 548 aa19.08■□□□□ 0.64
HMGN1-219ENST00000491183 MAP3K7CLP57077 242 aa19.08■□□□□ 0.64
HMGN1-219ENST00000491183 GAB4Q2WGN9 574 aa19.08■□□□□ 0.64
HMGN1-219ENST00000491183 COBLL1Q53SF7 1204 aa19.08■□□□□ 0.64
HMGN1-219ENST00000491183 SNX30Q5VWJ9 437 aa19.08■□□□□ 0.64
HMGN1-219ENST00000491183 HEATR6Q6AI08 1181 aaKnown RBP19.08■□□□□ 0.64
HMGN1-219ENST00000491183 PDZD8Q8NEN9 1154 aa19.08■□□□□ 0.64
HMGN1-219ENST00000491183 WHAMMQ8TF30 809 aa19.08■□□□□ 0.64
HMGN1-219ENST00000491183 OVCA2Q8WZ82 227 aa19.08■□□□□ 0.64
HMGN1-219ENST00000491183 CYP3A43Q9HB55 503 aa19.08■□□□□ 0.64
HMGN1-219ENST00000491183 RMND1Q9NWS8 449 aa19.08■□□□□ 0.64
HMGN1-219ENST00000491183 COMMD8Q9NX08 183 aa19.08■□□□□ 0.64
HMGN1-219ENST00000491183 SCAMP3O14828 347 aaKnown RBP19.07■□□□□ 0.64
HMGN1-219ENST00000491183 CETN3O15182 167 aa19.07■□□□□ 0.64
HMGN1-219ENST00000491183 COCHO43405 550 aa19.07■□□□□ 0.64
HMGN1-219ENST00000491183 RNF40O75150 1001 aa19.07■□□□□ 0.64
HMGN1-219ENST00000491183 ZDHHC11BP0C7U3 371 aa19.07■□□□□ 0.64
HMGN1-219ENST00000491183 DRD1P21728 446 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms