RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 MIPP30301 263 aa14.62□□□□□ -0.07
SMPD4-219ENST00000491128 MFSD7Q6UXD7 560 aa14.62□□□□□ -0.07
SMPD4-219ENST00000491128 SLC13A5Q86YT5 568 aaPredicted RBP14.62□□□□□ -0.07
SMPD4-219ENST00000491128 CRIPAKQ8N1N5 446 aa14.62□□□□□ -0.07
SMPD4-219ENST00000491128 PRELID2Q8N945 189 aa14.62□□□□□ -0.07
SMPD4-219ENST00000491128 MYCBPAPQ8TBZ2 947 aa14.62□□□□□ -0.07
SMPD4-219ENST00000491128 GPR152Q8TDT2 470 aa14.62□□□□□ -0.07
SMPD4-219ENST00000491128 IFT81Q8WYA0 676 aa14.62□□□□□ -0.07
SMPD4-219ENST00000491128 RPGRIP1Q96KN7 1286 aa14.62□□□□□ -0.07
SMPD4-219ENST00000491128 PEBP4Q96S96 227 aa14.62□□□□□ -0.07
SMPD4-219ENST00000491128 TRIM51Q9BSJ1 452 aa14.62□□□□□ -0.07
SMPD4-219ENST00000491128 SAE1Q9UBE0 346 aaPredicted RBP14.62□□□□□ -0.07
SMPD4-219ENST00000491128 LRRD1A4D1F6 860 aa14.62□□□□□ -0.07
SMPD4-219ENST00000491128 C2CD4BA6NLJ0 364 aa14.62□□□□□ -0.07
SMPD4-219ENST00000491128 CES2O00748 559 aa14.62□□□□□ -0.07
SMPD4-219ENST00000491128 SOAT2O75908 522 aa14.62□□□□□ -0.07
SMPD4-219ENST00000491128 HEXIM1O94992 359 aaKnown RBP14.62□□□□□ -0.07
SMPD4-219ENST00000491128 CSPG5O95196 566 aa14.62□□□□□ -0.07
SMPD4-219ENST00000491128 ZRANB2O95218 330 aaKnown RBP eCLIP14.62□□□□□ -0.07
SMPD4-219ENST00000491128 CXCL10P02778 98 aa14.62□□□□□ -0.07
SMPD4-219ENST00000491128 USP17L7P0C7H9 530 aa14.62□□□□□ -0.07
SMPD4-219ENST00000491128 CYP2F1P24903 491 aa14.62□□□□□ -0.07
SMPD4-219ENST00000491128 TKTL1P51854 596 aa14.62□□□□□ -0.07
SMPD4-219ENST00000491128 DYNLT1P63172 113 aa14.62□□□□□ -0.07
SMPD4-219ENST00000491128 PIGHQ14442 188 aaPredicted RBP14.62□□□□□ -0.07
SMPD4-219ENST00000491128 SLC39A12Q504Y0 691 aa14.62□□□□□ -0.07
SMPD4-219ENST00000491128 PPP1R2P3Q6NXS1 205 aa14.62□□□□□ -0.07
SMPD4-219ENST00000491128 TTC27Q6P3X3 843 aa14.62□□□□□ -0.07
SMPD4-219ENST00000491128 ADAM32Q8TC27 787 aa14.62□□□□□ -0.07
SMPD4-219ENST00000491128 EPB41L5Q9HCM4 733 aa14.62□□□□□ -0.07
SMPD4-219ENST00000491128 CHD7Q9P2D1 2997 aa14.62□□□□□ -0.07
SMPD4-219ENST00000491128 WDR35Q9P2L0 1181 aa14.62□□□□□ -0.07
SMPD4-219ENST00000491128 CDH9Q9ULB4 789 aa14.62□□□□□ -0.07
SMPD4-219ENST00000491128 TDRD15B5MCY1 1934 aaKnown RBP14.61□□□□□ -0.07
SMPD4-219ENST00000491128 ALDH2P05091 517 aa14.61□□□□□ -0.07
SMPD4-219ENST00000491128 GPD1P21695 349 aa14.61□□□□□ -0.07
SMPD4-219ENST00000491128 INTS6LQ5JSJ4 861 aaKnown RBP14.61□□□□□ -0.07
SMPD4-219ENST00000491128 B4GALNT4Q76KP1 1039 aa14.61□□□□□ -0.07
SMPD4-219ENST00000491128 TTC9BQ8N6N2 239 aa14.61□□□□□ -0.07
SMPD4-219ENST00000491128 SCAMP5Q8TAC9 235 aa14.61□□□□□ -0.07
SMPD4-219ENST00000491128 FAM124BQ9H5Z6 455 aaPredicted RBP14.61□□□□□ -0.07
SMPD4-219ENST00000491128 LRRC4Q9HBW1 653 aa14.61□□□□□ -0.07
SMPD4-219ENST00000491128 TMPRSS4Q9NRS4 437 aa14.61□□□□□ -0.07
SMPD4-219ENST00000491128 CHST7Q9NS84 486 aa14.61□□□□□ -0.07
SMPD4-219ENST00000491128 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.61□□□□□ -0.07
SMPD4-219ENST00000491128 XPO1O14980 1071 aaKnown RBP14.61□□□□□ -0.07
SMPD4-219ENST00000491128 INPPL1O15357 1258 aa14.61□□□□□ -0.07
SMPD4-219ENST00000491128 PCSK1P29120 753 aa14.61□□□□□ -0.07
SMPD4-219ENST00000491128 PLA2G4AP47712 749 aa14.61□□□□□ -0.07
SMPD4-219ENST00000491128 GPR15P49685 360 aa14.61□□□□□ -0.07
SMPD4-219ENST00000491128 SLC25A11Q02978 314 aaKnown RBP14.61□□□□□ -0.07
SMPD4-219ENST00000491128 IKBKEQ14164 716 aa14.61□□□□□ -0.07
SMPD4-219ENST00000491128 PRUNE1Q86TP1 453 aa14.61□□□□□ -0.07
SMPD4-219ENST00000491128 NPAS4Q8IUM7 802 aa14.61□□□□□ -0.07
SMPD4-219ENST00000491128 FAM172AQ8WUF8 416 aa14.61□□□□□ -0.07
SMPD4-219ENST00000491128 UROC1Q96N76 676 aa14.61□□□□□ -0.07
SMPD4-219ENST00000491128 TMEM106CQ9BVX2 250 aa14.61□□□□□ -0.07
SMPD4-219ENST00000491128 ULBP1Q9BZM6 244 aa14.61□□□□□ -0.07
SMPD4-219ENST00000491128 MARCH5Q9NX47 278 aa14.61□□□□□ -0.07
SMPD4-219ENST00000491128 ABI2Q9NYB9 513 aaPredicted RBP14.61□□□□□ -0.07
SMPD4-219ENST00000491128 KANSL3Q9P2N6 904 aa14.61□□□□□ -0.07
SMPD4-219ENST00000491128 ADAM28Q9UKQ2 775 aa14.61□□□□□ -0.07
SMPD4-219ENST00000491128 FAN1Q9Y2M0 1017 aa14.61□□□□□ -0.07
SMPD4-219ENST00000491128 C2CD2LO14523 706 aa14.6□□□□□ -0.07
SMPD4-219ENST00000491128 RAG1P15918 1043 aa14.6□□□□□ -0.07
SMPD4-219ENST00000491128 CTCFP49711 727 aaPredicted RBP14.6□□□□□ -0.07
SMPD4-219ENST00000491128 ZNF143P52747 638 aaPredicted RBP14.6□□□□□ -0.07
SMPD4-219ENST00000491128 ADCY1Q08828 1119 aa14.6□□□□□ -0.07
SMPD4-219ENST00000491128 SIX1Q15475 284 aaPredicted RBP14.6□□□□□ -0.07
SMPD4-219ENST00000491128 RSPO2Q6UXX9 243 aaPredicted RBP14.6□□□□□ -0.07
SMPD4-219ENST00000491128 MAGOHBQ96A72 148 aaKnown RBP14.6□□□□□ -0.07
SMPD4-219ENST00000491128 CALR3Q96L12 384 aaKnown RBP14.6□□□□□ -0.07
SMPD4-219ENST00000491128 ACBD6Q9BR61 282 aa14.6□□□□□ -0.07
SMPD4-219ENST00000491128 SEZ6LQ9BYH1 1024 aa14.6□□□□□ -0.07
SMPD4-219ENST00000491128 DPH5Q9H2P9 285 aa14.6□□□□□ -0.07
SMPD4-219ENST00000491128 C10orf88Q9H8K7 445 aa14.6□□□□□ -0.07
SMPD4-219ENST00000491128 USP18Q9UMW8 372 aa14.6□□□□□ -0.07
SMPD4-219ENST00000491128 YJEFN3A6XGL0 299 aa14.6□□□□□ -0.07
SMPD4-219ENST00000491128 E7ENQ6 273 aa14.6□□□□□ -0.07
SMPD4-219ENST00000491128 CYP11A1P05108 521 aa14.6□□□□□ -0.07
SMPD4-219ENST00000491128 GALTP07902 379 aa14.6□□□□□ -0.07
SMPD4-219ENST00000491128 SETSIPP0DME0 302 aa14.6□□□□□ -0.07
SMPD4-219ENST00000491128 RPL17P18621 184 aaKnown RBP14.6□□□□□ -0.07
SMPD4-219ENST00000491128 CARSP49589 748 aaKnown RBP14.6□□□□□ -0.07
SMPD4-219ENST00000491128 SLC8A3P57103 927 aa14.6□□□□□ -0.07
SMPD4-219ENST00000491128 PLCB3Q01970 1234 aa14.6□□□□□ -0.07
SMPD4-219ENST00000491128 TAP1Q03518 808 aa14.6□□□□□ -0.07
SMPD4-219ENST00000491128 MMRN1Q13201 1228 aa14.6□□□□□ -0.07
SMPD4-219ENST00000491128 DCAF6Q58WW2 860 aa14.6□□□□□ -0.07
SMPD4-219ENST00000491128 ODF2Q5BJF6 829 aa14.6□□□□□ -0.07
SMPD4-219ENST00000491128 ZC3H12AQ5D1E8 599 aaKnown RBP14.6□□□□□ -0.07
SMPD4-219ENST00000491128 RTP2Q5QGT7 225 aa14.6□□□□□ -0.07
SMPD4-219ENST00000491128 VARS2Q5ST30 1063 aaKnown RBP14.6□□□□□ -0.07
SMPD4-219ENST00000491128 SYPL2Q5VXT5 272 aa14.6□□□□□ -0.07
SMPD4-219ENST00000491128 SCN4BQ8IWT1 228 aa14.6□□□□□ -0.07
SMPD4-219ENST00000491128 SIX6OS1Q8N1H7 587 aa14.6□□□□□ -0.07
SMPD4-219ENST00000491128 EDEM1Q92611 657 aa14.6□□□□□ -0.07
SMPD4-219ENST00000491128 APBB2Q92870 758 aa14.6□□□□□ -0.07
SMPD4-219ENST00000491128 STIM2Q9P246 746 aa14.6□□□□□ -0.07
SMPD4-219ENST00000491128 TTC3P53804 2025 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms