RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 SLC8B1Q6J4K2 584 aa21.95■■□□□ 1.1
SND1-214ENST00000489417 CPNE8Q86YQ8 564 aa21.95■■□□□ 1.1
SND1-214ENST00000489417 FBXO22Q8NEZ5 403 aa21.95■■□□□ 1.1
SND1-214ENST00000489417 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.95■■□□□ 1.1
SND1-214ENST00000489417 FNIP1Q8TF40 1166 aa21.95■■□□□ 1.1
SND1-214ENST00000489417 CLEC4CQ8WTT0 213 aa21.95■■□□□ 1.1
SND1-214ENST00000489417 HES6Q96HZ4 224 aa21.95■■□□□ 1.1
SND1-214ENST00000489417 PGLYRP2Q96PD5 576 aa21.95■■□□□ 1.1
SND1-214ENST00000489417 L2HGDHQ9H9P8 463 aa21.95■■□□□ 1.1
SND1-214ENST00000489417 CDC23Q9UJX2 597 aa21.95■■□□□ 1.1
SND1-214ENST00000489417 CDY1Q9Y6F8 540 aa21.95■■□□□ 1.1
SND1-214ENST00000489417 MTMR11A4FU01 709 aa21.94■■□□□ 1.1
SND1-214ENST00000489417 MIF4GDA9UHW6 222 aaKnown RBP21.94■■□□□ 1.1
SND1-214ENST00000489417 F8VP50 259 aa21.94■■□□□ 1.1
SND1-214ENST00000489417 C2CD2LO14523 706 aa21.94■■□□□ 1.1
SND1-214ENST00000489417 FGF18O76093 207 aa21.94■■□□□ 1.1
SND1-214ENST00000489417 FBXO21O94952 628 aa21.94■■□□□ 1.1
SND1-214ENST00000489417 TCP1P17987 556 aaKnown RBP21.94■■□□□ 1.1
SND1-214ENST00000489417 GRIK1P39086 918 aa21.94■■□□□ 1.1
SND1-214ENST00000489417 DNA2P51530 1060 aa21.94■■□□□ 1.1
SND1-214ENST00000489417 ADCY1Q08828 1119 aa21.94■■□□□ 1.1
SND1-214ENST00000489417 ZNF252P-AS1Q0IIN9 211 aa21.94■■□□□ 1.1
SND1-214ENST00000489417 VSTM1Q6UX27 236 aa21.94■■□□□ 1.1
SND1-214ENST00000489417 SLC26A9Q7LBE3 791 aa21.94■■□□□ 1.1
SND1-214ENST00000489417 GPRIN1Q7Z2K8 1008 aa21.94■■□□□ 1.1
SND1-214ENST00000489417 VPS52Q8N1B4 723 aa21.94■■□□□ 1.1
SND1-214ENST00000489417 EMC1Q8N766 993 aa21.94■■□□□ 1.1
SND1-214ENST00000489417 SPPL2BQ8TCT7 592 aa21.94■■□□□ 1.1
SND1-214ENST00000489417 C2orf15Q8WU43 125 aaKnown RBP21.94■■□□□ 1.1
SND1-214ENST00000489417 RNPC3Q96LT9 517 aaKnown RBP21.94■■□□□ 1.1
SND1-214ENST00000489417 OSBPL9Q96SU4 736 aa21.94■■□□□ 1.1
SND1-214ENST00000489417 MRFAP1Q9Y605 127 aa21.94■■□□□ 1.1
SND1-214ENST00000489417 PTPRDP23468 1912 aa21.94■■□□□ 1.1
SND1-214ENST00000489417 ADAM12O43184 909 aa21.93■■□□□ 1.1
SND1-214ENST00000489417 RPL17P18621 184 aaKnown RBP21.93■■□□□ 1.1
SND1-214ENST00000489417 PSMA2P25787 234 aa21.93■■□□□ 1.1
SND1-214ENST00000489417 RNASE9P60153 205 aaKnown RBP21.93■■□□□ 1.1
SND1-214ENST00000489417 PIGHQ14442 188 aaPredicted RBP21.93■■□□□ 1.1
SND1-214ENST00000489417 RNF19BQ6ZMZ0 732 aa21.93■■□□□ 1.1
SND1-214ENST00000489417 SCN4BQ8IWT1 228 aa21.93■■□□□ 1.1
SND1-214ENST00000489417 NIPA2Q8N8Q9 360 aa21.93■■□□□ 1.1
SND1-214ENST00000489417 ATAD1Q8NBU5 361 aa21.93■■□□□ 1.1
SND1-214ENST00000489417 KHSRPQ92945 711 aaKnown RBP eCLIP21.93■■□□□ 1.1
SND1-214ENST00000489417 CD101Q93033 1021 aa21.93■■□□□ 1.1
SND1-214ENST00000489417 ULBP1Q9BZM6 244 aa21.93■■□□□ 1.1
SND1-214ENST00000489417 CNGB3Q9NQW8 809 aa21.93■■□□□ 1.1
SND1-214ENST00000489417 TRIM66O15016 1216 aa21.92■■□□□ 1.1
SND1-214ENST00000489417 DDX3YO15523 660 aaKnown RBP21.92■■□□□ 1.1
SND1-214ENST00000489417 SRGAP2O75044 1071 aa21.92■■□□□ 1.1
SND1-214ENST00000489417 GRAP2O75791 330 aa21.92■■□□□ 1.1
SND1-214ENST00000489417 GPD1P21695 349 aa21.92■■□□□ 1.1
SND1-214ENST00000489417 NDUFV1P49821 464 aa21.92■■□□□ 1.1
SND1-214ENST00000489417 MRPS5P82675 430 aaKnown RBP21.92■■□□□ 1.1
SND1-214ENST00000489417 ROR1Q01973 937 aa21.92■■□□□ 1.1
SND1-214ENST00000489417 TAF5Q15542 800 aa21.92■■□□□ 1.1
SND1-214ENST00000489417 EFHC1Q5JVL4 640 aa21.92■■□□□ 1.1
SND1-214ENST00000489417 GPR65Q8IYL9 337 aa21.92■■□□□ 1.1
SND1-214ENST00000489417 TNS4Q8IZW8 715 aa21.92■■□□□ 1.1
SND1-214ENST00000489417 KLHL23Q8NBE8 558 aa21.92■■□□□ 1.1
SND1-214ENST00000489417 RXFP2Q8WXD0 754 aa21.92■■□□□ 1.1
SND1-214ENST00000489417 C8orf48Q96LL4 319 aa21.92■■□□□ 1.1
SND1-214ENST00000489417 PSMB7Q99436 277 aa21.92■■□□□ 1.1
SND1-214ENST00000489417 USTQ9Y2C2 406 aa21.92■■□□□ 1.1
SND1-214ENST00000489417 WDR27A2RRH5 827 aa21.91■■□□□ 1.1
SND1-214ENST00000489417 C2CD4BA6NLJ0 364 aa21.91■■□□□ 1.1
SND1-214ENST00000489417 SART1O43290 800 aaKnown RBP21.91■■□□□ 1.1
SND1-214ENST00000489417 VNN2O95498 520 aa21.91■■□□□ 1.1
SND1-214ENST00000489417 CTNNA2P26232 953 aa21.91■■□□□ 1.1
SND1-214ENST00000489417 OR1D2P34982 312 aa21.91■■□□□ 1.1
SND1-214ENST00000489417 CTNNB1P35222 781 aa21.91■■□□□ 1.1
SND1-214ENST00000489417 FLT3P36888 993 aa21.91■■□□□ 1.1
SND1-214ENST00000489417 BMPR1AP36894 532 aa21.91■■□□□ 1.1
SND1-214ENST00000489417 DAOAP59103 153 aa21.91■■□□□ 1.1
SND1-214ENST00000489417 SHHQ15465 462 aa21.91■■□□□ 1.1
SND1-214ENST00000489417 ARCQ7LC44 396 aa21.91■■□□□ 1.1
SND1-214ENST00000489417 UBL4BQ8N7F7 174 aa21.91■■□□□ 1.1
SND1-214ENST00000489417 CLSTN3Q9BQT9 956 aa21.91■■□□□ 1.1
SND1-214ENST00000489417 ZBP1Q9H171 429 aa21.91■■□□□ 1.1
SND1-214ENST00000489417 ASNSD1Q9NWL6 643 aa21.91■■□□□ 1.1
SND1-214ENST00000489417 RWDD3Q9Y3V2 267 aa21.91■■□□□ 1.1
SND1-214ENST00000489417 CCDC66A2RUB6 948 aa21.9■■□□□ 1.1
SND1-214ENST00000489417 DPYSL4O14531 572 aa21.9■■□□□ 1.1
SND1-214ENST00000489417 KCNK3O14649 394 aa21.9■■□□□ 1.1
SND1-214ENST00000489417 HSF2BPO75031 334 aa21.9■■□□□ 1.1
SND1-214ENST00000489417 PDGFRAP16234 1089 aa21.9■■□□□ 1.1
SND1-214ENST00000489417 CXCR5P32302 372 aa21.9■■□□□ 1.1
SND1-214ENST00000489417 CTNNA1P35221 906 aaKnown RBP21.9■■□□□ 1.1
SND1-214ENST00000489417 ZNF143P52747 638 aaPredicted RBP21.9■■□□□ 1.1
SND1-214ENST00000489417 WHAMMP3Q1A5X7 153 aa21.9■■□□□ 1.1
SND1-214ENST00000489417 TRNP1Q6NT89 227 aa21.9■■□□□ 1.1
SND1-214ENST00000489417 CC2D1AQ6P1N0 951 aaPredicted RBP21.9■■□□□ 1.1
SND1-214ENST00000489417 SCML4Q8N228 414 aa21.9■■□□□ 1.1
SND1-214ENST00000489417 PATJQ8NI35 1801 aa21.9■■□□□ 1.1
SND1-214ENST00000489417 COG1Q8WTW3 980 aa21.9■■□□□ 1.1
SND1-214ENST00000489417 NDRG1Q92597 394 aaKnown RBP21.9■■□□□ 1.1
SND1-214ENST00000489417 KRT35Q92764 455 aa21.9■■□□□ 1.1
SND1-214ENST00000489417 PBKQ96KB5 322 aa21.9■■□□□ 1.1
SND1-214ENST00000489417 CNPY3Q9BT09 278 aa21.9■■□□□ 1.1
SND1-214ENST00000489417 MRPL17Q9NRX2 175 aaKnown RBP21.9■■□□□ 1.1
SND1-214ENST00000489417 LINC01553A4QN01 128 aa21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms