RNA–Protein interactions for RNA: ENST00000487620.1

ZNF3-215, Transcript of zinc finger protein 3, human

TSL 2

Gene ZNF3, Length 2,660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF3-215	ENST00000487620	NPNT	Q6UXI9	565 aa		10.21	□□□□□ -0.77
ZNF3-215	ENST00000487620	UBR7	Q8N806	425 aa		10.21	□□□□□ -0.77
ZNF3-215	ENST00000487620	PPM1N	Q8N819	430 aa		10.21	□□□□□ -0.77
ZNF3-215	ENST00000487620	ZNF526	Q8TF50	670 aa	Predicted RBP	10.21	□□□□□ -0.77
ZNF3-215	ENST00000487620	SLC44A1	Q8WWI5	657 aa		10.21	□□□□□ -0.77
ZNF3-215	ENST00000487620	SLC7A3	Q8WY07	619 aa		10.21	□□□□□ -0.77
ZNF3-215	ENST00000487620	SRPK1	Q96SB4	655 aa	Known RBP	10.21	□□□□□ -0.77
ZNF3-215	ENST00000487620	PHACTR1	Q9C0D0	580 aa		10.21	□□□□□ -0.77
ZNF3-215	ENST00000487620	ZNF518B	Q9C0D4	1074 aa		10.21	□□□□□ -0.77
ZNF3-215	ENST00000487620	PORCN	Q9H237	461 aa		10.21	□□□□□ -0.77
ZNF3-215	ENST00000487620	PAPOLB	Q9NRJ5	636 aa	Known RBP	10.21	□□□□□ -0.77
ZNF3-215	ENST00000487620	STRIP2	Q9ULQ0	834 aa		10.21	□□□□□ -0.77
ZNF3-215	ENST00000487620	COL11A1	P12107	1806 aa	Predicted RBP	10.21	□□□□□ -0.77
ZNF3-215	ENST00000487620	TRIM49D1	C9J1S8	452 aa		10.21	□□□□□ -0.78
ZNF3-215	ENST00000487620		I3L4J1	428 aa		10.21	□□□□□ -0.78
ZNF3-215	ENST00000487620	MAP3K7	O43318	606 aa		10.21	□□□□□ -0.78
ZNF3-215	ENST00000487620	AHCYL1	O43865	530 aa		10.21	□□□□□ -0.78
ZNF3-215	ENST00000487620	RARB	P10826	455 aa		10.21	□□□□□ -0.78
ZNF3-215	ENST00000487620	KCNA3	P22001	575 aa		10.21	□□□□□ -0.78
ZNF3-215	ENST00000487620	GCLC	P48506	637 aa	Predicted RBP	10.21	□□□□□ -0.78
ZNF3-215	ENST00000487620	PAPOLA	P51003	745 aa	Known RBP	10.21	□□□□□ -0.78
ZNF3-215	ENST00000487620	OCRL	Q01968	901 aa		10.21	□□□□□ -0.78
ZNF3-215	ENST00000487620	KDSR	Q06136	332 aa		10.21	□□□□□ -0.78
ZNF3-215	ENST00000487620	ORC1	Q13415	861 aa		10.21	□□□□□ -0.78
ZNF3-215	ENST00000487620	KRT72	Q14CN4	511 aa		10.21	□□□□□ -0.78
ZNF3-215	ENST00000487620	SNRNP48	Q6IEG0	339 aa	Known RBP	10.21	□□□□□ -0.78
ZNF3-215	ENST00000487620	CDHR3	Q6ZTQ4	885 aa		10.21	□□□□□ -0.78
ZNF3-215	ENST00000487620	PRPF39	Q86UA1	669 aa	Known RBP	10.21	□□□□□ -0.78
ZNF3-215	ENST00000487620	ARHGAP24	Q8N264	748 aa		10.21	□□□□□ -0.78
ZNF3-215	ENST00000487620	FBXO27	Q8NI29	283 aa		10.21	□□□□□ -0.78
ZNF3-215	ENST00000487620	NSUN6	Q8TEA1	469 aa	Known RBP	10.21	□□□□□ -0.78
ZNF3-215	ENST00000487620	ADGRA2	Q96PE1	1338 aa		10.21	□□□□□ -0.78
ZNF3-215	ENST00000487620	SLC13A1	Q9BZW2	595 aa		10.21	□□□□□ -0.78
ZNF3-215	ENST00000487620	NIF3L1	Q9GZT8	377 aa		10.21	□□□□□ -0.78
ZNF3-215	ENST00000487620	STX18	Q9P2W9	335 aa	Known RBP	10.21	□□□□□ -0.78
ZNF3-215	ENST00000487620	PPARGC1A	Q9UBK2	798 aa	Known RBP	10.21	□□□□□ -0.78
ZNF3-215	ENST00000487620	NXF1	Q9UBU9	619 aa	Known RBP	10.21	□□□□□ -0.78
ZNF3-215	ENST00000487620	MARCO	Q9UEW3	520 aa	Predicted RBP	10.21	□□□□□ -0.78
ZNF3-215	ENST00000487620	KCNG1	Q9UIX4	513 aa		10.21	□□□□□ -0.78
ZNF3-215	ENST00000487620	C2CD2	Q9Y426	696 aa		10.21	□□□□□ -0.78
ZNF3-215	ENST00000487620	FER1L6	Q2WGJ9	1857 aa		10.21	□□□□□ -0.78
ZNF3-215	ENST00000487620	PSME4	Q14997	1843 aa		10.21	□□□□□ -0.78
ZNF3-215	ENST00000487620	APOC4-APOC2	K7ER74	178 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	APOC2	P02655	101 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	SUPT20HL2	P0C7V6	817 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	RXRB	P28702	533 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	POLR2B	P30876	1174 aa	Known RBP	10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	TMPRSS15	P98073	1019 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	TFAM	Q00059	246 aa	Known RBP	10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	AP1B1	Q10567	949 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	MMRN1	Q13201	1228 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	SUPT20HL1	Q3ZLR7	823 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	XRRA1	Q6P2D8	792 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	FAM83A	Q86UY5	434 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	ARID3B	Q8IVW6	561 aa	Predicted RBP	10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	THNSL1	Q8IYQ7	743 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	CCDC110	Q8TBZ0	833 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	AKT1S1	Q96B36	256 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	FAF2	Q96CS3	445 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	GML	Q99445	158 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	ZNF302	Q9NR11	478 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	CYTH4	Q9UIA0	394 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	TRPC5	Q9UL62	973 aa	Predicted RBP	10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	EFR3B	Q9Y2G0	817 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	UTRN	P46939	3433 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	ITGBL1	O95965	494 aa	Predicted RBP	10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	PIGR	P01833	764 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	OAT	P04181	439 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	RAP1GAP	P47736	663 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	ROR1	Q01973	937 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	SLC18A2	Q05940	514 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	ZNF699	Q32M78	642 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	AP1AR	Q63HQ0	302 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	KRT27	Q7Z3Y8	459 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	WDR49	Q8IV35	697 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	PHC3	Q8NDX5	983 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	CLPTM1L	Q96KA5	538 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	ACAP3	Q96P50	834 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	MMADHC	Q9H3L0	296 aa	Predicted RBP	10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	ZNF395	Q9H8N7	513 aa	Predicted RBP	10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	ARHGEF4	Q9NR80	690 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	ZNF277	Q9NRM2	450 aa	Predicted RBP	10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	TEX264	Q9Y6I9	313 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	MIP	P30301	263 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	CACNA2D1	P54289	1103 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	OSTN	P61366	133 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	SP2	Q02086	613 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	BST1	Q10588	318 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	C11orf91	Q3C1V1	193 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	FKBP1C	Q5VVH2	108 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	OR52E8	Q6IFG1	317 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	SH2D5	Q6ZV89	423 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	TREML1	Q86YW5	311 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	BRSK2	Q8IWQ3	736 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	KBTBD2	Q8IY47	623 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	SMC1B	Q8NDV3	1235 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	CPXM1	Q96SM3	734 aa		10.2	□□□□□ -0.78
ZNF3-215	ENST00000487620	ZNF184	Q99676	751 aa	Predicted RBP	10.2	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms