RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 VCANP13611 3396 aa15.37■□□□□ 0.05
POLR2J3-204ENST00000486319 CARNS1A5YM72 827 aa15.36■□□□□ 0.05
POLR2J3-204ENST00000486319 KRT3P12035 628 aa15.36■□□□□ 0.05
POLR2J3-204ENST00000486319 PAX3P23760 479 aa15.36■□□□□ 0.05
POLR2J3-204ENST00000486319 MARCKSL1P49006 195 aa15.36■□□□□ 0.05
POLR2J3-204ENST00000486319 SCNN1GP51170 649 aa15.36■□□□□ 0.05
POLR2J3-204ENST00000486319 ZNF211Q13398 564 aaPredicted RBP15.36■□□□□ 0.05
POLR2J3-204ENST00000486319 MAP9Q49MG5 647 aa15.36■□□□□ 0.05
POLR2J3-204ENST00000486319 PPP1R26Q5T8A7 1209 aaPredicted RBP15.36■□□□□ 0.05
POLR2J3-204ENST00000486319 ZNF280BQ86YH2 543 aa15.36■□□□□ 0.05
POLR2J3-204ENST00000486319 C12orf29Q8N999 325 aa15.36■□□□□ 0.05
POLR2J3-204ENST00000486319 UBA3Q8TBC4 463 aa15.36■□□□□ 0.05
POLR2J3-204ENST00000486319 MCEEQ96PE7 176 aa15.36■□□□□ 0.05
POLR2J3-204ENST00000486319 AP1M1Q9BXS5 423 aa15.36■□□□□ 0.05
POLR2J3-204ENST00000486319 SLITRK6Q9H5Y7 841 aa15.36■□□□□ 0.05
POLR2J3-204ENST00000486319 TLR9Q9NR96 1032 aa15.36■□□□□ 0.05
POLR2J3-204ENST00000486319 MIOSQ9NXC5 875 aa15.36■□□□□ 0.05
POLR2J3-204ENST00000486319 STIM2Q9P246 746 aa15.36■□□□□ 0.05
POLR2J3-204ENST00000486319 L1RE1Q9UN81 338 aa15.36■□□□□ 0.05
POLR2J3-204ENST00000486319 LZTS1Q9Y250 596 aa15.36■□□□□ 0.05
POLR2J3-204ENST00000486319 COL4A4P53420 1690 aaPredicted RBP15.36■□□□□ 0.05
POLR2J3-204ENST00000486319 FNDC1Q4ZHG4 1894 aaPredicted RBP15.36■□□□□ 0.05
POLR2J3-204ENST00000486319 NT5C1B-RDH14C9J2C7 533 aa15.35■□□□□ 0.05
POLR2J3-204ENST00000486319 PODXLO00592 558 aa15.35■□□□□ 0.05
POLR2J3-204ENST00000486319 CYB561D2O14569 222 aa15.35■□□□□ 0.05
POLR2J3-204ENST00000486319 ATP8B1O43520 1251 aa15.35■□□□□ 0.05
POLR2J3-204ENST00000486319 ALDH2P05091 517 aa15.35■□□□□ 0.05
POLR2J3-204ENST00000486319 IRS1P35568 1242 aa15.35■□□□□ 0.05
POLR2J3-204ENST00000486319 RPL7AP62424 266 aaKnown RBP15.35■□□□□ 0.05
POLR2J3-204ENST00000486319 MRPS5P82675 430 aaKnown RBP15.35■□□□□ 0.05
POLR2J3-204ENST00000486319 GRIK3Q13003 919 aa15.35■□□□□ 0.05
POLR2J3-204ENST00000486319 XYLT1Q86Y38 959 aa15.35■□□□□ 0.05
POLR2J3-204ENST00000486319 CPNE8Q86YQ8 564 aa15.35■□□□□ 0.05
POLR2J3-204ENST00000486319 SLC39A11Q8N1S5 342 aa15.35■□□□□ 0.05
POLR2J3-204ENST00000486319 TMEM86AQ8N2M4 240 aa15.35■□□□□ 0.05
POLR2J3-204ENST00000486319 NIPA2Q8N8Q9 360 aa15.35■□□□□ 0.05
POLR2J3-204ENST00000486319 CCDC26Q8TAB7 109 aa15.35■□□□□ 0.05
POLR2J3-204ENST00000486319 FNIP1Q8TF40 1166 aa15.35■□□□□ 0.05
POLR2J3-204ENST00000486319 STK32AQ8WU08 396 aa15.35■□□□□ 0.05
POLR2J3-204ENST00000486319 PPP2R3CQ969Q6 453 aa15.35■□□□□ 0.05
POLR2J3-204ENST00000486319 DDX27Q96GQ7 796 aaKnown RBP15.35■□□□□ 0.05
POLR2J3-204ENST00000486319 NME7Q9Y5B8 376 aa15.35■□□□□ 0.05
POLR2J3-204ENST00000486319 DDHD2O94830 711 aa15.34■□□□□ 0.05
POLR2J3-204ENST00000486319 ERBB2P04626 1255 aa15.34■□□□□ 0.05
POLR2J3-204ENST00000486319 GALTP07902 379 aa15.34■□□□□ 0.05
POLR2J3-204ENST00000486319 PYGMP11217 842 aa15.34■□□□□ 0.05
POLR2J3-204ENST00000486319 CLCNKBP51801 687 aa15.34■□□□□ 0.05
POLR2J3-204ENST00000486319 TFF2Q03403 129 aa15.34■□□□□ 0.05
POLR2J3-204ENST00000486319 AAK1Q2M2I8 961 aa15.34■□□□□ 0.05
POLR2J3-204ENST00000486319 PKDCCQ504Y2 493 aa15.34■□□□□ 0.05
POLR2J3-204ENST00000486319 KLHL7Q8IXQ5 586 aa15.34■□□□□ 0.05
POLR2J3-204ENST00000486319 MCRS1Q96EZ8 462 aa15.34■□□□□ 0.05
POLR2J3-204ENST00000486319 TMEM169Q96HH4 297 aa15.34■□□□□ 0.05
POLR2J3-204ENST00000486319 UROC1Q96N76 676 aa15.34■□□□□ 0.05
POLR2J3-204ENST00000486319 ASB2Q96Q27 587 aa15.34■□□□□ 0.05
POLR2J3-204ENST00000486319 DPEP3Q9H4B8 488 aa15.34■□□□□ 0.05
POLR2J3-204ENST00000486319 ST7Q9NRC1 585 aa15.34■□□□□ 0.05
POLR2J3-204ENST00000486319 FAM49BQ9NUQ9 324 aa15.34■□□□□ 0.05
POLR2J3-204ENST00000486319 DNAJB4Q9UDY4 337 aa15.34■□□□□ 0.05
POLR2J3-204ENST00000486319 USTQ9Y2C2 406 aa15.34■□□□□ 0.05
POLR2J3-204ENST00000486319 NLRC5Q86WI3 1866 aa15.34■□□□□ 0.05
POLR2J3-204ENST00000486319 GOLGA8SH3BPF8 625 aa15.33■□□□□ 0.05
POLR2J3-204ENST00000486319 INPPL1O15357 1258 aa15.33■□□□□ 0.05
POLR2J3-204ENST00000486319 ZRANB2O95218 330 aaKnown RBP eCLIP15.33■□□□□ 0.05
POLR2J3-204ENST00000486319 GJB6O95452 261 aa15.33■□□□□ 0.05
POLR2J3-204ENST00000486319 PDGFRBP09619 1106 aa15.33■□□□□ 0.05
POLR2J3-204ENST00000486319 TNFRSF8P28908 595 aa15.33■□□□□ 0.05
POLR2J3-204ENST00000486319 BCAT1P54687 386 aa15.33■□□□□ 0.05
POLR2J3-204ENST00000486319 ERVFC1P60507 584 aa15.33■□□□□ 0.05
POLR2J3-204ENST00000486319 TUSC3Q13454 348 aa15.33■□□□□ 0.05
POLR2J3-204ENST00000486319 LRRC38Q5VT99 294 aa15.33■□□□□ 0.05
POLR2J3-204ENST00000486319 PDE12Q6L8Q7 609 aaKnown RBP15.33■□□□□ 0.05
POLR2J3-204ENST00000486319 DSTYKQ6XUX3 929 aa15.33■□□□□ 0.05
POLR2J3-204ENST00000486319 CCNI2Q6ZMN8 369 aaPredicted RBP15.33■□□□□ 0.05
POLR2J3-204ENST00000486319 EP400NLQ6ZTU2 488 aa15.33■□□□□ 0.05
POLR2J3-204ENST00000486319 MAATS1Q7Z4T9 603 aa15.33■□□□□ 0.05
POLR2J3-204ENST00000486319 SLC13A5Q86YT5 568 aaPredicted RBP15.33■□□□□ 0.05
POLR2J3-204ENST00000486319 IFT20Q8IY31 132 aa15.33■□□□□ 0.05
POLR2J3-204ENST00000486319 KATNAL2Q8IYT4 538 aa15.33■□□□□ 0.05
POLR2J3-204ENST00000486319 MAIP1Q8WWC4 291 aa15.33■□□□□ 0.05
POLR2J3-204ENST00000486319 SENP8Q96LD8 212 aa15.33■□□□□ 0.05
POLR2J3-204ENST00000486319 IGFLR1Q9H665 355 aa15.33■□□□□ 0.05
POLR2J3-204ENST00000486319 TJP2Q9UDY2 1190 aa15.33■□□□□ 0.05
POLR2J3-204ENST00000486319 DMGDHQ9UI17 866 aaKnown RBP15.33■□□□□ 0.05
POLR2J3-204ENST00000486319 FAN1Q9Y2M0 1017 aa15.33■□□□□ 0.05
POLR2J3-204ENST00000486319 TSC2P49815 1807 aa15.33■□□□□ 0.04
POLR2J3-204ENST00000486319 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.33■□□□□ 0.04
POLR2J3-204ENST00000486319 GABRDO14764 452 aa15.33■□□□□ 0.04
POLR2J3-204ENST00000486319 SART1O43290 800 aaKnown RBP15.33■□□□□ 0.04
POLR2J3-204ENST00000486319 HEXIM1O94992 359 aaKnown RBP15.33■□□□□ 0.04
POLR2J3-204ENST00000486319 LMO2P25791 158 aa15.33■□□□□ 0.04
POLR2J3-204ENST00000486319 RFC1P35251 1148 aaPredicted RBP15.33■□□□□ 0.04
POLR2J3-204ENST00000486319 CETN2P41208 172 aa15.33■□□□□ 0.04
POLR2J3-204ENST00000486319 SSR1P43307 286 aaKnown RBP15.33■□□□□ 0.04
POLR2J3-204ENST00000486319 LHX1P48742 406 aa15.33■□□□□ 0.04
POLR2J3-204ENST00000486319 SLC11A1P49279 550 aa15.33■□□□□ 0.04
POLR2J3-204ENST00000486319 ZNF252P-AS1Q0IIN9 211 aa15.33■□□□□ 0.04
POLR2J3-204ENST00000486319 BST2Q10589 180 aaKnown RBP15.33■□□□□ 0.04
POLR2J3-204ENST00000486319 HYAL1Q12794 435 aa15.33■□□□□ 0.04
POLR2J3-204ENST00000486319 ACAP1Q15027 740 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms