RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 BAG5Q9UL15 447 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 ZMYND8Q9ULU4 1186 aaPredicted RBP5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 DNAJC16Q9Y2G8 782 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 PIAS3Q9Y6X2 628 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 RUSC2Q8N2Y8 1516 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 RNF103-CHMP3A0A140T963 221 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 PRAMEF22A3QJZ6 481 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 KRT87PA6NCN2 255 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 FAM90A27PA6NNH2 459 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 RNF103O00237 685 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 PGRMC2O15173 223 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 TEX33O43247 280 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 KIF5CO60282 957 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 CCNT2O60583 730 aaKnown RBP5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 CUTAO60888 179 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 TIAF1O95411 115 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 OPN1MWP04001 364 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 OPN1MW2P0DN77 364 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 OPN1MW3P0DN78 364 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 FPR2P25090 351 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 SERPINA4P29622 427 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 TKTL1P51854 596 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 RPL7AP62424 266 aaKnown RBP5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 JAG1P78504 1218 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 SATB1Q01826 763 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 NFATC3Q12968 1075 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 CBX3Q13185 183 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 SLC14A1Q13336 389 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 DCTN2Q13561 401 aaKnown RBP5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 INSCQ1MX18 579 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 PRAMEF18Q5VWM3 479 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 SARM1Q6SZW1 724 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 OLFM4Q6UX06 510 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 RRAGAQ7L523 313 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 TMEM110Q86TL2 294 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 FAM129CQ86XR2 697 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 DNAAF5Q86Y56 855 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 FAM90A1Q86YD7 464 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 DZIP1Q86YF9 867 aaKnown RBP5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 RAB11FIP4Q86YS3 637 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 PLD6Q8N2A8 252 aaKnown RBP5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 SYT2Q8N9I0 419 aaPredicted RBP5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 AGBL5Q8NDL9 886 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 BRSK1Q8TDC3 778 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 SH3RF3Q8TEJ3 882 aaPredicted RBP5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 UBASH3BQ8TF42 649 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 TNPO1Q92973 898 aaKnown RBP5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 PTP4A1Q93096 173 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 SYTL4Q96C24 671 aaPredicted RBP5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 CHFRQ96EP1 664 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 RBM18Q96H35 190 aaKnown RBP5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 ZNF764Q96H86 408 aaPredicted RBP5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 Q96M66 194 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 ATP6V0BQ99437 205 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 DBNDD2Q9BQY9 259 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 TTPALQ9BTX7 342 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 FUT8Q9BYC5 575 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 VPS33BQ9H267 617 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 FAM83DQ9H4H8 585 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 PRDM12Q9H4Q4 367 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 TASP1Q9H6P5 420 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 SH2D4AQ9H788 454 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 KAT14Q9H8E8 782 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 MID1IP1Q9NPA3 183 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 SNTG1Q9NSN8 517 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 TMEM140Q9NV12 185 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 KCTD5Q9NXV2 234 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 SELENONQ9NZV5 590 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 KCMF1Q9P0J7 381 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 CFAP97Q9P2B7 532 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 MYOTQ9UBF9 498 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 LIMA1Q9UHB6 759 aaKnown RBP5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 FBXL5Q9UKA1 691 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 HSF4Q9ULV5 492 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 TRIM17Q9Y577 477 aa5.49□□□□□ -1.53
R3HDM1-216ENST00000483065 A0A0A6YYJ9 748 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 LOC102723971A0A1B0GUV8 181 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 AQP7P3A6NL99 342 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 NEURL1BA8MQ27 555 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 GNAT3A8MTJ3 354 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 PSMD14O00487 310 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 TNPO2O14787 897 aaKnown RBP5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 BCAT2O15382 392 aaPredicted RBP5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 KLK10O43240 276 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 CCP110O43303 1012 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 HYAL3O43820 417 aaPredicted RBP5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 USP2O75604 605 aaPredicted RBP5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 KIAA0754O94854 1291 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 VIPP01282 170 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 FUCA1P04066 466 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 HEXBP07686 556 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 SFTPCP11686 197 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 CPA1P15085 419 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 KRT4P19013 534 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 BTF3P20290 206 aaKnown RBP5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 ACVR2AP27037 513 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 EPHA8P29322 1005 aaPredicted RBP5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 TM4SF1P30408 202 aa5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 ADSLP30566 484 aaPredicted RBP5.48□□□□□ -1.53
R3HDM1-216ENST00000483065 SLC5A2P31639 672 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms