RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 MARVELD2Q8N4S9 558 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 TAB3Q8N5C8 712 aaPredicted RBP4.4□□□□□ -1.7
VPS50-210ENST00000471188 ACTRT2Q8TDY3 377 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 GRK7Q8WTQ7 553 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 SLC5A5Q92911 643 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 TAMM41Q96BW9 452 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 CCDC138Q96M89 665 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 WRNIP1Q96S55 665 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 CCDC68Q9H2F9 335 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 UGT1A7Q9HAW7 530 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 UGT1A10Q9HAW8 530 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 UGT1A8Q9HAW9 530 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 AASDHPPTQ9NRN7 309 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 LIMD1Q9UGP4 676 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 DAPK2Q9UIK4 370 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 GNEQ9Y223 722 aaKnown RBP4.4□□□□□ -1.7
VPS50-210ENST00000471188 IKBKGQ9Y6K9 419 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 EMSYQ7Z589 1322 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 KAT6BQ8WYB5 2073 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 NID2Q14112 1375 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 ROBO2Q9HCK4 1378 aa4.4□□□□□ -1.7
VPS50-210ENST00000471188 C1orf232A0A0U1RR37 186 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 J3QL48 77 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 PSMD12O00232 456 aaPredicted RBP4.4□□□□□ -1.71
VPS50-210ENST00000471188 ATP2A1O14983 1001 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 ZC3H11AO75152 810 aaKnown RBP eCLIP4.4□□□□□ -1.71
VPS50-210ENST00000471188 SIN3BO75182 1162 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 TCEA3O75764 348 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 DXOO77932 396 aaKnown RBP4.4□□□□□ -1.71
VPS50-210ENST00000471188 DDAH1O94760 285 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 MT-ND3P03897 115 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 ALAS1P13196 640 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 HOXA10P31260 410 aaPredicted RBP4.4□□□□□ -1.71
VPS50-210ENST00000471188 SOX5P35711 763 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 MXI1P50539 228 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 CDK9P50750 372 aaKnown RBP4.4□□□□□ -1.71
VPS50-210ENST00000471188 STAT2P52630 851 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 AQP5P55064 265 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 FASTKD3Q14CZ7 662 aaKnown RBP4.4□□□□□ -1.71
VPS50-210ENST00000471188 EDRF1Q3B7T1 1238 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 ZNF829Q3KNS6 432 aaPredicted RBP4.4□□□□□ -1.71
VPS50-210ENST00000471188 FAM209AQ5JX71 171 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 PERM1Q5SV97 790 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 NIPAL1Q6NVV3 410 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 ELMSAN1Q6PJG2 1045 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 GPR141Q7Z602 305 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 NEK8Q86SG6 692 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 HPS6Q86YV9 775 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 CPNE9Q8IYJ1 553 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 AHI1Q8N157 1196 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 CCDC89Q8N998 374 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 PPP1R14CQ8TAE6 165 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 CALML6Q8TD86 181 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 EME1Q96AY2 570 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 WNK4Q96J92 1243 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 WWP1Q9H0M0 922 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 XAB2Q9HCS7 855 aaKnown RBP4.4□□□□□ -1.71
VPS50-210ENST00000471188 PCDH12Q9NPG4 1184 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 KCNQ5Q9NR82 932 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.4□□□□□ -1.71
VPS50-210ENST00000471188 PSMC3IPQ9P2W1 217 aaPredicted RBP4.4□□□□□ -1.71
VPS50-210ENST00000471188 STK17AQ9UEE5 414 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 EBF1Q9UH73 591 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 DNAJC12Q9UKB3 198 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 POU2F3Q9UKI9 436 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 SYNPO2Q9UMS6 1093 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 BCS1LQ9Y276 419 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 PCDHGA3Q9Y5H0 932 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 PHRF1Q9P1Y6 1649 aaKnown RBP4.4□□□□□ -1.71
VPS50-210ENST00000471188 NUP188Q5SRE5 1749 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 TCRBV5S4A2TA0A5A2 114 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 ANKRD34BA5PLL1 514 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 CFAP99D6REC4 459 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 NOP56O00567 594 aaKnown RBP4.4□□□□□ -1.71
VPS50-210ENST00000471188 NOL3O60936 208 aaKnown RBP4.4□□□□□ -1.71
VPS50-210ENST00000471188 ALDH1A1P00352 501 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 IFNB1P01574 187 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 DLDP09622 509 aaKnown RBP4.4□□□□□ -1.71
VPS50-210ENST00000471188 UQCRFS1P1P0C7P4 283 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 JUNDP17535 347 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 CDH15P55291 814 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 GPC5P78333 572 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 PRAMEP78395 509 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 NRF1Q16656 503 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 COBLL1Q53SF7 1204 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 WDR45BQ5MNZ6 344 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 NANOGP8Q6NSW7 305 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 RHBDF2Q6PJF5 856 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 DENND5BQ6ZUT9 1274 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 KCNK18Q7Z418 384 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 ADGRG6Q86SQ4 1221 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 DEFB107AQ8IZN7 70 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 PQLC1Q8N2U9 271 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 ALLCQ8N6M5 410 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 CXorf38Q8TB03 319 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 SUN5Q8TC36 379 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 TBCKQ8TEA7 893 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 PSPC1Q8WXF1 523 aaKnown RBP4.4□□□□□ -1.71
VPS50-210ENST00000471188 JADE3Q92613 823 aa4.4□□□□□ -1.71
VPS50-210ENST00000471188 RAD54LQ92698 747 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms