RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 SAFBQ15424 915 aaKnown RBP eCLIP5.47□□□□□ -1.53
PRPF40A-205ENST00000467114 SUCLG2Q96I99 432 aa5.47□□□□□ -1.53
PRPF40A-205ENST00000467114 SH2D3AQ9BRG2 576 aa5.47□□□□□ -1.53
PRPF40A-205ENST00000467114 XPR1Q9UBH6 696 aa5.47□□□□□ -1.53
PRPF40A-205ENST00000467114 SSX2IPQ9Y2D8 614 aa5.47□□□□□ -1.53
PRPF40A-205ENST00000467114 TBC1D30Q9Y2I9 924 aa5.47□□□□□ -1.53
PRPF40A-205ENST00000467114 F8W8V4 182 aa5.46□□□□□ -1.54
PRPF40A-205ENST00000467114 TOP3BO95985 862 aaKnown RBP5.46□□□□□ -1.54
PRPF40A-205ENST00000467114 GRPP07492 148 aa5.46□□□□□ -1.54
PRPF40A-205ENST00000467114 ATXN1LP0C7T5 689 aaKnown RBP5.46□□□□□ -1.54
PRPF40A-205ENST00000467114 RPL17P18621 184 aaKnown RBP5.46□□□□□ -1.54
PRPF40A-205ENST00000467114 PPIFP30405 207 aaKnown RBP5.46□□□□□ -1.54
PRPF40A-205ENST00000467114 PIK3CBP42338 1070 aa5.46□□□□□ -1.54
PRPF40A-205ENST00000467114 CLCN2P51788 898 aa5.46□□□□□ -1.54
PRPF40A-205ENST00000467114 CASP5P51878 434 aa5.46□□□□□ -1.54
PRPF40A-205ENST00000467114 LOXL3P58215 753 aa5.46□□□□□ -1.54
PRPF40A-205ENST00000467114 SP2Q02086 613 aa5.46□□□□□ -1.54
PRPF40A-205ENST00000467114 LONRF3Q496Y0 759 aa5.46□□□□□ -1.54
PRPF40A-205ENST00000467114 COBLL1Q53SF7 1204 aa5.46□□□□□ -1.54
PRPF40A-205ENST00000467114 PCID2Q5JVF3 399 aa5.46□□□□□ -1.54
PRPF40A-205ENST00000467114 CATSPERGQ6ZRH7 1159 aa5.46□□□□□ -1.54
PRPF40A-205ENST00000467114 GAS2L3Q86XJ1 694 aa5.46□□□□□ -1.54
PRPF40A-205ENST00000467114 GALNT16Q8N428 558 aa5.46□□□□□ -1.54
PRPF40A-205ENST00000467114 RNF152Q8N8N0 203 aa5.46□□□□□ -1.54
PRPF40A-205ENST00000467114 OR6B3Q8NGW1 331 aa5.46□□□□□ -1.54
PRPF40A-205ENST00000467114 OR56A3Q8NH54 315 aa5.46□□□□□ -1.54
PRPF40A-205ENST00000467114 PTDSS2Q9BVG9 487 aa5.46□□□□□ -1.54
PRPF40A-205ENST00000467114 FSD1LQ9BXM9 530 aa5.46□□□□□ -1.54
PRPF40A-205ENST00000467114 LRRC27Q9C0I9 530 aa5.46□□□□□ -1.54
PRPF40A-205ENST00000467114 CNNM1Q9NRU3 951 aa5.46□□□□□ -1.54
PRPF40A-205ENST00000467114 SERTAD3Q9UJW9 196 aa5.46□□□□□ -1.54
PRPF40A-205ENST00000467114 TMEM233B4DJY2 109 aa5.45□□□□□ -1.54
PRPF40A-205ENST00000467114 PPEF2O14830 753 aa5.45□□□□□ -1.54
PRPF40A-205ENST00000467114 PMM2O15305 246 aa5.45□□□□□ -1.54
PRPF40A-205ENST00000467114 IL1R1P14778 569 aa5.45□□□□□ -1.54
PRPF40A-205ENST00000467114 ALDH5A1P51649 535 aaPredicted RBP5.45□□□□□ -1.54
PRPF40A-205ENST00000467114 CYP4F2P78329 520 aa5.45□□□□□ -1.54
PRPF40A-205ENST00000467114 HOXA4Q00056 320 aaPredicted RBP5.45□□□□□ -1.54
PRPF40A-205ENST00000467114 ZIK1Q3SY52 487 aaPredicted RBP5.45□□□□□ -1.54
PRPF40A-205ENST00000467114 ZNF783Q6ZMS7 281 aa5.45□□□□□ -1.54
PRPF40A-205ENST00000467114 CHSY1Q86X52 802 aa5.45□□□□□ -1.54
PRPF40A-205ENST00000467114 DNAJC5GQ8N7S2 189 aa5.45□□□□□ -1.54
PRPF40A-205ENST00000467114 RP9Q8TA86 221 aaKnown RBP5.45□□□□□ -1.54
PRPF40A-205ENST00000467114 ZNF518BQ9C0D4 1074 aa5.45□□□□□ -1.54
PRPF40A-205ENST00000467114 PRSS22Q9GZN4 317 aa5.45□□□□□ -1.54
PRPF40A-205ENST00000467114 ZNF700Q9H0M5 742 aa5.45□□□□□ -1.54
PRPF40A-205ENST00000467114 NUP62CLQ9H1M0 184 aa5.45□□□□□ -1.54
PRPF40A-205ENST00000467114 SLC52A1Q9NWF4 448 aa5.45□□□□□ -1.54
PRPF40A-205ENST00000467114 CYP2D7A0A087X1C5 515 aa5.44□□□□□ -1.54
PRPF40A-205ENST00000467114 MBD3L4A6NDZ8 208 aaPredicted RBP5.44□□□□□ -1.54
PRPF40A-205ENST00000467114 MBD3L3A6NE82 208 aaPredicted RBP5.44□□□□□ -1.54
PRPF40A-205ENST00000467114 TJP3O95049 919 aa5.44□□□□□ -1.54
PRPF40A-205ENST00000467114 FESP07332 822 aa5.44□□□□□ -1.54
PRPF40A-205ENST00000467114 ENGP17813 658 aa5.44□□□□□ -1.54
PRPF40A-205ENST00000467114 KCNJ5P48544 419 aa5.44□□□□□ -1.54
PRPF40A-205ENST00000467114 PXNP49023 591 aaPredicted RBP5.44□□□□□ -1.54
PRPF40A-205ENST00000467114 SLC13A2Q13183 592 aa5.44□□□□□ -1.54
PRPF40A-205ENST00000467114 IQCB1Q15051 598 aa5.44□□□□□ -1.54
PRPF40A-205ENST00000467114 C3orf38Q5JPI3 329 aa5.44□□□□□ -1.54
PRPF40A-205ENST00000467114 SLC2A7Q6PXP3 512 aa5.44□□□□□ -1.54
PRPF40A-205ENST00000467114 LAYNQ6UX15 382 aa5.44□□□□□ -1.54
PRPF40A-205ENST00000467114 PARS2Q7L3T8 475 aaKnown RBP5.44□□□□□ -1.54
PRPF40A-205ENST00000467114 C8orf58Q8NAV2 365 aa5.44□□□□□ -1.54
PRPF40A-205ENST00000467114 PCSK9Q8NBP7 692 aaKnown RBP5.44□□□□□ -1.54
PRPF40A-205ENST00000467114 SVIPQ8NHG7 77 aa5.44□□□□□ -1.54
PRPF40A-205ENST00000467114 ATG4AQ8WYN0 398 aa5.44□□□□□ -1.54
PRPF40A-205ENST00000467114 APOL5Q9BWW9 433 aa5.44□□□□□ -1.54
PRPF40A-205ENST00000467114 TTYH3Q9C0H2 523 aa5.44□□□□□ -1.54
PRPF40A-205ENST00000467114 XPNPEP3Q9NQH7 507 aa5.44□□□□□ -1.54
PRPF40A-205ENST00000467114 AFF4Q9UHB7 1163 aaKnown RBP5.44□□□□□ -1.54
PRPF40A-205ENST00000467114 ADAMTS5Q9UNA0 930 aa5.44□□□□□ -1.54
PRPF40A-205ENST00000467114 CACNA1IQ9P0X4 2223 aa5.44□□□□□ -1.54
PRPF40A-205ENST00000467114 CCDC194A0A1B0GVG4 234 aa5.43□□□□□ -1.54
PRPF40A-205ENST00000467114 SMIM35A0A1B0GVV1 85 aa5.43□□□□□ -1.54
PRPF40A-205ENST00000467114 MYL1P05976 194 aa5.43□□□□□ -1.54
PRPF40A-205ENST00000467114 NPSP0C0P6 89 aa5.43□□□□□ -1.54
PRPF40A-205ENST00000467114 LILRA4P59901 499 aa5.43□□□□□ -1.54
PRPF40A-205ENST00000467114 ZNF543Q08ER8 600 aa5.43□□□□□ -1.54
PRPF40A-205ENST00000467114 DAZAP2Q15038 168 aaPredicted RBP5.43□□□□□ -1.54
PRPF40A-205ENST00000467114 ARHGAP40Q5TG30 622 aa5.43□□□□□ -1.54
PRPF40A-205ENST00000467114 DCAF12L1Q5VU92 463 aa5.43□□□□□ -1.54
PRPF40A-205ENST00000467114 LMBRD2Q68DH5 695 aaPredicted RBP5.43□□□□□ -1.54
PRPF40A-205ENST00000467114 ZDHHC24Q6UX98 284 aa5.43□□□□□ -1.54
PRPF40A-205ENST00000467114 NAPRTQ6XQN6 538 aa5.43□□□□□ -1.54
PRPF40A-205ENST00000467114 TRIM72Q6ZMU5 477 aa5.43□□□□□ -1.54
PRPF40A-205ENST00000467114 ZNF280BQ86YH2 543 aa5.43□□□□□ -1.54
PRPF40A-205ENST00000467114 LRRC71Q8N4P6 559 aa5.43□□□□□ -1.54
PRPF40A-205ENST00000467114 SLC15A4Q8N697 577 aa5.43□□□□□ -1.54
PRPF40A-205ENST00000467114 PNLDC1Q8NA58 520 aaKnown RBP5.43□□□□□ -1.54
PRPF40A-205ENST00000467114 CYP2W1Q8TAV3 490 aa5.43□□□□□ -1.54
PRPF40A-205ENST00000467114 ZC3H10Q96K80 434 aaKnown RBP5.43□□□□□ -1.54
PRPF40A-205ENST00000467114 ASB2Q96Q27 587 aa5.43□□□□□ -1.54
PRPF40A-205ENST00000467114 MACROD1Q9BQ69 325 aa5.43□□□□□ -1.54
PRPF40A-205ENST00000467114 UNKQ9C0B0 810 aaKnown RBP5.43□□□□□ -1.54
PRPF40A-205ENST00000467114 TUBA8Q9NY65 449 aaPredicted RBP5.43□□□□□ -1.54
PRPF40A-205ENST00000467114 TMX2Q9Y320 296 aa5.43□□□□□ -1.54
PRPF40A-205ENST00000467114 A1L4Q6 167 aa5.42□□□□□ -1.54
PRPF40A-205ENST00000467114 H7C1Q1 480 aa5.42□□□□□ -1.54
PRPF40A-205ENST00000467114 TRIM38O00635 465 aa5.42□□□□□ -1.54
PRPF40A-205ENST00000467114 MGEA5O60502 916 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms