RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 TUBB6Q9BUF5 446 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 NMUR2Q9GZQ4 415 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 DHX33Q9H6R0 707 aaKnown RBP7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 KCNK13Q9HB14 408 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 SSU72Q9NP77 194 aaKnown RBP7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 PGAP2Q9UHJ9 254 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 SPATA31C2B4DYI2 1134 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 H3BRJ5 948 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 LIN7AO14910 233 aaPredicted RBP7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 TBX10O75333 385 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 GRAP2O75791 330 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 ABCD1P33897 745 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 RFC5P40937 340 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 YWHAEP62258 255 aaKnown RBP7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 BMPR2Q13873 1038 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 SH3PXD2AQ5TCZ1 1133 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 CDHR3Q6ZTQ4 885 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 ARID3BQ8IVW6 561 aaPredicted RBP7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 LRRC71Q8N4P6 559 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 TTLL6Q8N841 843 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 PTCD3Q96EY7 689 aaKnown RBP7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 OXNAD1Q96HP4 312 aaPredicted RBP7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 ZNF518BQ9C0D4 1074 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 MYOZ2Q9NPC6 264 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 SPATS2LQ9NUQ6 558 aaKnown RBP7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 STRIP2Q9ULQ0 834 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 HEY1Q9Y5J3 304 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 RBBP6Q7Z6E9 1792 aaKnown RBP7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 E5RJQ4 531 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 I3L4J1 428 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 ADCY3O60266 1144 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 HNRNPCL1O60812 293 aaKnown RBP7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 ITGBL1O95965 494 aaPredicted RBP7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 DLDP09622 509 aaKnown RBP7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 IRX1P78414 480 aaPredicted RBP7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 MRPS35P82673 323 aaKnown RBP7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 ROR1Q01973 937 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 CNTN2Q02246 1040 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 TMEM132BQ14DG7 1078 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 POLNQ7Z5Q5 900 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 WDR49Q8IV35 697 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 CEP120Q8N960 986 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 RNF149Q8NC42 400 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 PPFIBP2Q8ND30 876 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 UBA3Q8TBC4 463 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 NRG4Q8WWG1 115 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 APOPT1Q96IL0 206 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 RILPQ96NA2 401 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 ACAP3Q96P50 834 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 SRPK1Q96SB4 655 aaKnown RBP7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 DHRS4Q9BTZ2 278 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 TLE6Q9H808 572 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 CYB561D2O14569 222 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 PSMG1O95456 288 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 BAG2O95816 211 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 SKIP12755 728 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 PTPN7P35236 360 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 PRKD1Q15139 912 aaPredicted RBP7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 RAB6CQ53S08 254 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 NBPF12Q5TAG4 269 aaPredicted RBP7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 CCDC33Q8N5R6 958 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 ZNF483Q8TF39 744 aaPredicted RBP7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 SLC44A1Q8WWI5 657 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 ZNF333Q96JL9 665 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 MRPL4Q9BYD3 311 aaKnown RBP7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 RAB6CQ9H0N0 254 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 NRBP2Q9NSY0 501 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 USP18Q9UMW8 372 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 MAD1L1Q9Y6D9 718 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 ADGRA2Q96PE1 1338 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 E7ESA3 106 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 APOC4-APOC2K7ER74 178 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 KCNN4O15554 427 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 UGT1A9O60656 530 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 TOM1L1O75674 476 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 PIGRP01833 764 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 TNNC2P02585 160 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 APOC2P02655 101 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 ERBB2P04626 1255 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 APRTP07741 180 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 ACADSP16219 412 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 YY1P25490 414 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 HMGB2P26583 209 aaKnown RBP7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 BACE1P56817 501 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 SLC34A1Q06495 639 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 STXBP2Q15833 593 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 FAM102AQ5T9C2 384 aaPredicted RBP7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 LRRC74BQ6ZQY2 392 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 RTKN2Q8IZC4 609 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 UBR7Q8N806 425 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 NIPA2Q8N8Q9 360 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 SMC1BQ8NDV3 1235 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 CFAP61Q8NHU2 1237 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 FBXO27Q8NI29 283 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 CLPTM1LQ96KA5 538 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 TSC22D3Q99576 134 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 ADPGKQ9BRR6 497 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 TRIM56Q9BRZ2 755 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms