RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 HYOU1Q9Y4L1 999 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 C5orf67F2Z3F1 127 aa10.19□□□□□ -0.78
RIF1-202ENST00000414861 TEX28O15482 410 aa10.19□□□□□ -0.78
RIF1-202ENST00000414861 GRAP2O75791 330 aa10.19□□□□□ -0.78
RIF1-202ENST00000414861 FTCDO95954 541 aa10.19□□□□□ -0.78
RIF1-202ENST00000414861 HADHBP55084 474 aaKnown RBP10.19□□□□□ -0.78
RIF1-202ENST00000414861 SLC8A3P57103 927 aa10.19□□□□□ -0.78
RIF1-202ENST00000414861 OGDHQ02218 1023 aa10.19□□□□□ -0.78
RIF1-202ENST00000414861 ZNF252P-AS1Q0IIN9 211 aa10.19□□□□□ -0.78
RIF1-202ENST00000414861 DUSP4Q13115 394 aa10.19□□□□□ -0.78
RIF1-202ENST00000414861 DDR2Q16832 855 aa10.19□□□□□ -0.78
RIF1-202ENST00000414861 RAB41Q5JT25 222 aa10.19□□□□□ -0.78
RIF1-202ENST00000414861 FAM102AQ5T9C2 384 aaPredicted RBP10.19□□□□□ -0.78
RIF1-202ENST00000414861 OR6B2Q6IFH4 312 aa10.19□□□□□ -0.78
RIF1-202ENST00000414861 TRNP1Q6NT89 227 aa10.19□□□□□ -0.78
RIF1-202ENST00000414861 SCN4BQ8IWT1 228 aa10.19□□□□□ -0.78
RIF1-202ENST00000414861 EMC1Q8N766 993 aa10.19□□□□□ -0.78
RIF1-202ENST00000414861 SPPL3Q8TCT6 385 aa10.19□□□□□ -0.78
RIF1-202ENST00000414861 POF1BQ8WVV4 589 aa10.19□□□□□ -0.78
RIF1-202ENST00000414861 KCTD13Q8WZ19 329 aa10.19□□□□□ -0.78
RIF1-202ENST00000414861 TCF25Q9BQ70 676 aa10.19□□□□□ -0.78
RIF1-202ENST00000414861 PLVAPQ9BX97 442 aa10.19□□□□□ -0.78
RIF1-202ENST00000414861 OXCT2Q9BYC2 517 aaPredicted RBP10.19□□□□□ -0.78
RIF1-202ENST00000414861 CERS4Q9HA82 394 aa10.19□□□□□ -0.78
RIF1-202ENST00000414861 PARVAQ9NVD7 372 aa10.19□□□□□ -0.78
RIF1-202ENST00000414861 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.18□□□□□ -0.78
RIF1-202ENST00000414861 TMEM110-MUSTN1A8MSY1 372 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 GRM6O15303 877 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 CA8P35219 290 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 GRIK1P39086 918 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 TKTL1P51854 596 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 CAMK1Q14012 370 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 ZNF268Q14587 947 aaPredicted RBP10.18□□□□□ -0.78
RIF1-202ENST00000414861 DAB2IPQ5VWQ8 1189 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 TRIM58Q8NG06 486 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 SCAMP5Q8TAC9 235 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 GPR152Q8TDT2 470 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 KHSRPQ92945 711 aaKnown RBP eCLIP10.18□□□□□ -0.782e-7■■■■□ 20
RIF1-202ENST00000414861 SEPT5Q99719 369 aaPredicted RBP10.18□□□□□ -0.78
RIF1-202ENST00000414861 NKX2-4Q9H2Z4 354 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 ABCB6Q9NP58 842 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 CYLDQ9NQC7 956 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 PACSIN2Q9UNF0 486 aaPredicted RBP10.18□□□□□ -0.78
RIF1-202ENST00000414861 RWDD3Q9Y3V2 267 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 SCINQ9Y6U3 715 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 SZT2Q5T011 3432 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 REV3LO60673 3130 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 DOCK6Q96HP0 2047 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 ENC1O14682 589 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 TNFRSF10BO14763 440 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 NCK2O43639 380 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 SEC24AO95486 1093 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 CNPP09543 421 aaKnown RBP10.18□□□□□ -0.78
RIF1-202ENST00000414861 RFC1P35251 1148 aaPredicted RBP10.18□□□□□ -0.78
RIF1-202ENST00000414861 IRS1P35568 1242 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 MAGEA11P43364 429 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 ACADSBP45954 432 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 SLC5A3P53794 718 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 MESDQ14696 234 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 MGAT5BQ3V5L5 792 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 PLPP4Q5VZY2 271 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 VSTM1Q6UX27 236 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 TMC7Q7Z402 723 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 DAAM2Q86T65 1068 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 FEZF2Q8TBJ5 459 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 SPPL2BQ8TCT7 592 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 ZNF592Q92610 1267 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 TGS1Q96RS0 853 aaKnown RBP10.18□□□□□ -0.78
RIF1-202ENST00000414861 SELENOOQ9BVL4 669 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 ULBP1Q9BZM6 244 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 LRRC4Q9HBW1 653 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 MRPL47Q9HD33 250 aaKnown RBP10.18□□□□□ -0.78
RIF1-202ENST00000414861 ENTPD7Q9NQZ7 604 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 WDR35Q9P2L0 1181 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 LZTS1Q9Y250 596 aa10.18□□□□□ -0.78
RIF1-202ENST00000414861 COL4A4P53420 1690 aaPredicted RBP10.18□□□□□ -0.78
RIF1-202ENST00000414861 TMEM191CA6NGB0 347 aa10.17□□□□□ -0.78
RIF1-202ENST00000414861 SIGLEC16A6NMB1 481 aa10.17□□□□□ -0.78
RIF1-202ENST00000414861 HIDE1A8MVS5 230 aa10.17□□□□□ -0.78
RIF1-202ENST00000414861 ABLIM3O94929 683 aa10.17□□□□□ -0.78
RIF1-202ENST00000414861 KRT3P12035 628 aa10.17□□□□□ -0.78
RIF1-202ENST00000414861 ATF6P18850 670 aa10.17□□□□□ -0.78
RIF1-202ENST00000414861 FLT3P36888 993 aa10.17□□□□□ -0.78
RIF1-202ENST00000414861 RNASE9P60153 205 aaKnown RBP10.17□□□□□ -0.78
RIF1-202ENST00000414861 ERVK-21P61565 698 aa10.17□□□□□ -0.78
RIF1-202ENST00000414861 SLC6A3Q01959 620 aa10.17□□□□□ -0.78
RIF1-202ENST00000414861 IFRD2Q12894 506 aaPredicted RBP10.17□□□□□ -0.78
RIF1-202ENST00000414861 HFE2Q6ZVN8 426 aa10.17□□□□□ -0.78
RIF1-202ENST00000414861 BHLHA9Q7RTU4 235 aa10.17□□□□□ -0.78
RIF1-202ENST00000414861 SLFN11Q7Z7L1 901 aa10.17□□□□□ -0.78
RIF1-202ENST00000414861 SIX6OS1Q8N1H7 587 aa10.17□□□□□ -0.78
RIF1-202ENST00000414861 ZNF461Q8TAF7 563 aa10.17□□□□□ -0.78
RIF1-202ENST00000414861 ALS2CR12Q96Q35 445 aa10.17□□□□□ -0.78
RIF1-202ENST00000414861 C11orf84Q9BUA3 381 aaPredicted RBP10.17□□□□□ -0.78
RIF1-202ENST00000414861 RXFP1Q9HBX9 757 aa10.17□□□□□ -0.78
RIF1-202ENST00000414861 TLR9Q9NR96 1032 aa10.17□□□□□ -0.78
RIF1-202ENST00000414861 TMEM59LQ9UK28 342 aa10.17□□□□□ -0.78
RIF1-202ENST00000414861 MTCL1Q9Y4B5 1905 aaKnown RBP10.17□□□□□ -0.78
RIF1-202ENST00000414861 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.17□□□□□ -0.78
RIF1-202ENST00000414861 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms