RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 CCDC153Q494R4 210 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 FAM182BQ5T319 152 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 USP17L1Q7RTZ2 530 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 MCPH1Q8NEM0 835 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 MRPL4Q9BYD3 311 aaKnown RBP13.26□□□□□ -0.29
USP47-202ENST00000339865 RNF123Q5XPI4 1314 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 PRXQ9BXM0 1461 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 A0A0B4J269 797 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 GRAP2O75791 330 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 PTSQ03393 145 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 TUBB3Q13509 450 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 PTK6Q13882 451 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 RASA2Q15283 850 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 RABL6Q3YEC7 729 aaPredicted RBP13.26□□□□□ -0.29
USP47-202ENST00000339865 PERM1Q5SV97 790 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 EFL1Q7Z2Z2 1120 aaKnown RBP13.26□□□□□ -0.29
USP47-202ENST00000339865 ZNF589Q86UQ0 364 aaPredicted RBP13.26□□□□□ -0.29
USP47-202ENST00000339865 EFR3BQ9Y2G0 817 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 PDS5AQ29RF7 1337 aaKnown RBP13.25□□□□□ -0.29
USP47-202ENST00000339865 PSMD12O00232 456 aaPredicted RBP13.25□□□□□ -0.29
USP47-202ENST00000339865 CYP26A1O43174 497 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 SLC1A1P43005 524 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 DYNLL1P63167 89 aaKnown RBP13.25□□□□□ -0.29
USP47-202ENST00000339865 TBCELQ5QJ74 424 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 EPB41L4BQ9H329 900 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 HEATR9A2RTY3 570 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 LIN7AO14910 233 aaPredicted RBP13.25□□□□□ -0.29
USP47-202ENST00000339865 DYRK3O43781 588 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 SOAT2O75908 522 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 HLA-DQA2P01906 255 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 SEL1L3Q68CR1 1132 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 EPB41L1Q9H4G0 881 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 SLC52A2Q9HAB3 445 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 CYP4F12Q9HCS2 524 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 FBXO40Q9UH90 709 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 STOML2Q9UJZ1 356 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 GSTK1Q9Y2Q3 226 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 SPACA6W5XKT8 324 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 H2AFYO75367 372 aaKnown RBP13.25□□□□□ -0.29
USP47-202ENST00000339865 CNPP09543 421 aaKnown RBP13.25□□□□□ -0.29
USP47-202ENST00000339865 ATP6AP1LQ52LC2 224 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 CAMKK2Q96RR4 588 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 CHP1Q99653 195 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 GSDMCQ9BYG8 508 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 CELF4Q9BZC1 486 aaKnown RBP13.25□□□□□ -0.29
USP47-202ENST00000339865 ELL3Q9HB65 397 aaPredicted RBP13.25□□□□□ -0.29
USP47-202ENST00000339865 MIEF1Q9NQG6 463 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 TRMT6Q9UJA5 497 aaKnown RBP13.25□□□□□ -0.29
USP47-202ENST00000339865 UBE2QL1A1L167 161 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 HS6ST1O60243 411 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 ZNF806P0C7X5 589 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 FGFR3P22607 806 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 CALB2P22676 271 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 KATNAL1Q9BW62 490 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 TMEM117Q9H0C3 514 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 VCPKMTQ9H867 229 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 KANSL2Q9H9L4 492 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 CHP2O43745 196 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 KPNA1P52294 538 aaPredicted RBP13.25□□□□□ -0.29
USP47-202ENST00000339865 MPP2Q14168 576 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 TCEAL5Q5H9L2 206 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 TEX13BQ9BXU2 312 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 JMJD4Q9H9V9 463 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 NMRK2Q9NPI5 230 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 ZFYVE9O95405 1425 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 CD2BP2O95400 341 aaKnown RBP13.25□□□□□ -0.29
USP47-202ENST00000339865 FCGR1AP12314 374 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 ZNF37AP17032 561 aaPredicted RBP13.25□□□□□ -0.29
USP47-202ENST00000339865 PIGHQ14442 188 aaPredicted RBP13.25□□□□□ -0.29
USP47-202ENST00000339865 OOSP2Q86WS3 158 aa13.25□□□□□ -0.29
USP47-202ENST00000339865 GCP02774 474 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 ZNF24P17028 368 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 GEMIN4P57678 1058 aaKnown RBP13.24□□□□□ -0.29
USP47-202ENST00000339865 CHRNDQ07001 517 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 BST2Q10589 180 aaKnown RBP13.24□□□□□ -0.29
USP47-202ENST00000339865 POC5Q8NA72 575 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 SPPL2AQ8TCT8 520 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 ACAD9Q9H845 621 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 CHMP1AQ9HD42 196 aaPredicted RBP13.24□□□□□ -0.29
USP47-202ENST00000339865 PABPC1P11940 636 aaKnown RBP13.24□□□□□ -0.29
USP47-202ENST00000339865 JAK1P23458 1154 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 ARL3P36405 182 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 ETFBP38117 255 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 FAM98BQ52LJ0 330 aaKnown RBP13.24□□□□□ -0.29
USP47-202ENST00000339865 ENOSF1Q7L5Y1 443 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 CCDC33Q8N5R6 958 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 PRCCQ92733 491 aaPredicted RBP13.24□□□□□ -0.29
USP47-202ENST00000339865 COPS7BQ9H9Q2 264 aaPredicted RBP13.24□□□□□ -0.29
USP47-202ENST00000339865 RBMX2Q9Y388 322 aaKnown RBP13.24□□□□□ -0.29
USP47-202ENST00000339865 ERBB4Q15303 1308 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 C2CD2LO14523 706 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 RBMXL2O75526 392 aaKnown RBP13.24□□□□□ -0.29
USP47-202ENST00000339865 CYP21A2P08686 494 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 ACADMP11310 421 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 ALDH9A1P49189 494 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 RGS7P49802 495 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 TAF13Q15543 124 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 FIG4Q92562 907 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 SLC9A8Q9Y2E8 581 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 BCLAF3A2AJT9 711 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms