RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 TAS2R14Q9NYV8 317 aa15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 UBP1Q9NZI7 540 aa15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 PROSCO94903 275 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 RAG1P15918 1043 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 YY1P25490 414 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 SLC1A6P48664 564 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 HSPA13P48723 471 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 EML3Q32P44 896 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 KRT35Q92764 455 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 GLMNQ92990 594 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 TMEM79Q9BSE2 394 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 BLOC1S6Q9UL45 172 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 TMEM150BA6NC51 233 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 CSDE1O75534 798 aaKnown RBP15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 TJAP1Q5JTD0 557 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 STRIP1Q5VSL9 837 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 SETD3Q86TU7 594 aaPredicted RBP15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 ACER1Q8TDN7 264 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 SEPT1Q8WYJ6 367 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 OXNAD1Q96HP4 312 aaPredicted RBP15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 SH3GL2Q99962 352 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 LATS2Q9NRM7 1088 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 ZSCAN5DPP0CG00 497 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 RALBP11234 206 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 SLC34A1Q06495 639 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 STILQ15468 1287 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 KCTD21Q4G0X4 260 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 RERGLQ9H628 205 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 DPP3Q9NY33 737 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 FCHO1O14526 889 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 TCF7P36402 384 aaPredicted RBP15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 SNRPFP62306 86 aaKnown RBP15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 CCNG2Q16589 344 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 LRRC8BQ6P9F7 803 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 TUBGCP3Q96CW5 907 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 NSMCE4AQ9NXX6 385 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 TM9SF1O15321 606 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 TPP2P29144 1249 aaPredicted RBP15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 CYP2W1Q8TAV3 490 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 KIAA1210Q9ULL0 1709 aa15.86■□□□□ 0.13
SHROOM4-201ENST00000289292 SMAPO00193 183 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 FAM200BP0CF97 657 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 CHRM3P20309 590 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 TRIM25Q14258 630 aaKnown RBP15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 RRM2BQ7LG56 351 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 DDI1Q8WTU0 396 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 ECSITQ9BQ95 431 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 CHST7Q9NS84 486 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 SCN3BQ9NY72 215 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 CNOT7Q9UIV1 285 aaKnown RBP15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 CYP24A1Q07973 514 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 DMPKQ09013 629 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 SEL1L3Q68CR1 1132 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 ZSCAN18Q8TBC5 510 aaPredicted RBP15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 ATXN2LQ8WWM7 1075 aaKnown RBP15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 ATG4CQ96DT6 458 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 MUC3BQ9H195 1237 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 EPHB6O15197 1021 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 ELK3P41970 407 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 KCNJ2P63252 427 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 MICU2Q8IYU8 434 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 ETAA1Q9NY74 926 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 AP3B1O00203 1094 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 FDFT1P37268 417 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 PWP1Q13610 501 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 CES3Q6UWW8 571 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 KCNK18Q7Z418 384 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 BNIPLQ7Z465 357 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 ZNF75CPQ92670 426 aaPredicted RBP15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 THUMPD3Q9BV44 507 aaKnown RBP15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 SMARCAD1Q9H4L7 1026 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 ZNF556Q9HAH1 456 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 MCM8Q9UJA3 840 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 ZC3H4Q9UPT8 1303 aaKnown RBP15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 SMIM22K7EJ46 135 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 PECAM1P16284 738 aaPredicted RBP15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 STIP1P31948 543 aaKnown RBP15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 N4BP2L1Q5TBK1 243 aaPredicted RBP15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 TXNRD3Q86VQ6 643 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 SLC26A11Q86WA9 606 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 HES6Q96HZ4 224 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 SEMA6AQ9H2E6 1030 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 KCND1Q9NSA2 647 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 ZNF212Q9UDV6 495 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 USP32Q8NFA0 1604 aa15.85■□□□□ 0.13
SHROOM4-201ENST00000289292 FAM86B2P0C5J1 330 aa15.84■□□□□ 0.13
SHROOM4-201ENST00000289292 ATP4AP20648 1035 aa15.84■□□□□ 0.13
SHROOM4-201ENST00000289292 SOAT1P35610 550 aa15.84■□□□□ 0.13
SHROOM4-201ENST00000289292 MEA1Q16626 185 aa15.84■□□□□ 0.13
SHROOM4-201ENST00000289292 WASHC2DQ5SRD0 308 aa15.84■□□□□ 0.13
SHROOM4-201ENST00000289292 HHIPL2Q6UWX4 724 aa15.84■□□□□ 0.13
SHROOM4-201ENST00000289292 EXD1Q8NHP7 514 aa15.84■□□□□ 0.13
SHROOM4-201ENST00000289292 BBS2Q9BXC9 721 aa15.84■□□□□ 0.13
SHROOM4-201ENST00000289292 TEX13BQ9BXU2 312 aa15.84■□□□□ 0.13
SHROOM4-201ENST00000289292 EFCAB1Q9HAE3 211 aa15.84■□□□□ 0.13
SHROOM4-201ENST00000289292 ANKEF1Q9NU02 776 aa15.84■□□□□ 0.13
SHROOM4-201ENST00000289292 WDR27A2RRH5 827 aa15.84■□□□□ 0.13
SHROOM4-201ENST00000289292 SDR42E2A6NKP2 422 aa15.84■□□□□ 0.13
SHROOM4-201ENST00000289292 BANF1O75531 89 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms