RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 MARCOQ9UEW3 520 aaPredicted RBP16.01■□□□□ 0.15
TIMP3-201ENST00000266085 RIPK3Q9Y572 518 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.01■□□□□ 0.15
TIMP3-201ENST00000266085 FRMD3A2A2Y4 597 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 FBXO21O94952 628 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 SETSIPP0DME0 302 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 RARGP13631 454 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 IRAK1P51617 712 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 RPL10AP62906 217 aaKnown RBP16.01■□□□□ 0.15
TIMP3-201ENST00000266085 ITGB3BPQ13352 177 aaPredicted RBP16.01■□□□□ 0.15
TIMP3-201ENST00000266085 LCA5Q86VQ0 697 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 TNFRSF25Q93038 417 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 SH3KBP1Q96B97 665 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 GAD1Q99259 594 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 L1RE1Q9UN81 338 aa16.01■□□□□ 0.15
TIMP3-201ENST00000266085 HIST1H2AGP0C0S8 130 aaPredicted RBP16■□□□□ 0.15
TIMP3-201ENST00000266085 HIST1H2ADP20671 130 aa16■□□□□ 0.15
TIMP3-201ENST00000266085 RAB27AP51159 221 aa16■□□□□ 0.15
TIMP3-201ENST00000266085 GEMIN4P57678 1058 aaKnown RBP16■□□□□ 0.15
TIMP3-201ENST00000266085 DLG4P78352 724 aa16■□□□□ 0.15
TIMP3-201ENST00000266085 TBCCQ15814 346 aa16■□□□□ 0.15
TIMP3-201ENST00000266085 KIAA0319LQ8IZA0 1049 aa16■□□□□ 0.15
TIMP3-201ENST00000266085 VCPIP1Q96JH7 1222 aa16■□□□□ 0.15
TIMP3-201ENST00000266085 ELMO2Q96JJ3 720 aa16■□□□□ 0.15
TIMP3-201ENST00000266085 HIST1H2AHQ96KK5 128 aa16■□□□□ 0.15
TIMP3-201ENST00000266085 CAMKK2Q96RR4 588 aa16■□□□□ 0.15
TIMP3-201ENST00000266085 HIST1H2AJQ99878 128 aa16■□□□□ 0.15
TIMP3-201ENST00000266085 H2AFJQ9BTM1 129 aa16■□□□□ 0.15
TIMP3-201ENST00000266085 RNF208Q9H0X6 261 aa16■□□□□ 0.15
TIMP3-201ENST00000266085 NPHS2Q9NP85 383 aa16■□□□□ 0.15
TIMP3-201ENST00000266085 AP4E1Q9UPM8 1137 aa16■□□□□ 0.15
TIMP3-201ENST00000266085 NFASCO94856 1347 aa16■□□□□ 0.15
TIMP3-201ENST00000266085 URODP06132 367 aa16■□□□□ 0.15
TIMP3-201ENST00000266085 CAPRIN1Q14444 709 aaKnown RBP16■□□□□ 0.15
TIMP3-201ENST00000266085 CCNG2Q16589 344 aa16■□□□□ 0.15
TIMP3-201ENST00000266085 ACTL9Q8TC94 416 aa16■□□□□ 0.15
TIMP3-201ENST00000266085 FUT8Q9BYC5 575 aa16■□□□□ 0.15
TIMP3-201ENST00000266085 TMEM134Q9H6X4 195 aa16■□□□□ 0.15
TIMP3-201ENST00000266085 RPS6KL1Q9Y6S9 549 aa16■□□□□ 0.15
TIMP3-201ENST00000266085 PEAK1Q9H792 1746 aa16■□□□□ 0.15
TIMP3-201ENST00000266085 NRCAMQ92823 1304 aa16■□□□□ 0.15
TIMP3-201ENST00000266085 PYGBP11216 843 aa16■□□□□ 0.15
TIMP3-201ENST00000266085 AXLP30530 894 aa16■□□□□ 0.15
TIMP3-201ENST00000266085 PHEXP78562 749 aa16■□□□□ 0.15
TIMP3-201ENST00000266085 PTGISQ16647 500 aa16■□□□□ 0.15
TIMP3-201ENST00000266085 SPOCD1Q6ZMY3 1216 aa16■□□□□ 0.15
TIMP3-201ENST00000266085 SZRD1Q7Z422 152 aa16■□□□□ 0.15
TIMP3-201ENST00000266085 PBXIP1Q96AQ6 731 aa16■□□□□ 0.15
TIMP3-201ENST00000266085 GGT7Q9UJ14 662 aa16■□□□□ 0.15
TIMP3-201ENST00000266085 E2F6O75461 281 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 PYGLP06737 847 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 RAG1P15918 1043 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 EFEMP1Q12805 493 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 ELAVL2Q12926 359 aaKnown RBP15.99■□□□□ 0.15
TIMP3-201ENST00000266085 MAP2K5Q13163 448 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 MEA1Q16626 185 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.99■□□□□ 0.15
TIMP3-201ENST00000266085 MROH9Q5TGP6 573 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 INPP4AQ96PE3 977 aaPredicted RBP15.99■□□□□ 0.15
TIMP3-201ENST00000266085 NAT9Q9BTE0 207 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 WHRNQ9P202 907 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 KANSL3Q9P2N6 904 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 GLTPD2A6NH11 291 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 SPDYE5A6NIY4 337 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 TRIM49D1C9J1S8 452 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 AKT1P31749 480 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 TEDDM1Q5T9Z0 273 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 TTC39BQ5VTQ0 682 aaPredicted RBP15.99■□□□□ 0.15
TIMP3-201ENST00000266085 CHADLQ6NUI6 762 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 ZNF384Q8TF68 577 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 MRPS31Q92665 395 aaKnown RBP15.99■□□□□ 0.15
TIMP3-201ENST00000266085 ARL8AQ96BM9 186 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.99■□□□□ 0.15
TIMP3-201ENST00000266085 SIK3Q9Y2K2 1263 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 ASTN2O75129 1339 aaPredicted RBP15.99■□□□□ 0.15
TIMP3-201ENST00000266085 ROBO3Q96MS0 1386 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 MGEA5O60502 916 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 MYO1DO94832 1006 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 PEX19P40855 299 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 SEC24CP53992 1094 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 KDSRQ06136 332 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 CDH18Q13634 790 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 LVRNQ6Q4G3 990 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 RNF217Q8TC41 542 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 TRPV2Q9Y5S1 764 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 H2AFXP16104 143 aaPredicted RBP15.99■□□□□ 0.15
TIMP3-201ENST00000266085 DNAJB2P25686 324 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 IFNA8P32881 189 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 ARHGDIAP52565 204 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 ANO5Q75V66 913 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 TMC7Q7Z402 723 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 ADAM2Q99965 735 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 TMEM121Q9BTD3 319 aa15.99■□□□□ 0.15
TIMP3-201ENST00000266085 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.98■□□□□ 0.15
TIMP3-201ENST00000266085 HNRNPCL1O60812 293 aaKnown RBP15.98■□□□□ 0.15
TIMP3-201ENST00000266085 MAFO75444 373 aaPredicted RBP15.98■□□□□ 0.15
TIMP3-201ENST00000266085 ASMTLO95671 621 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 SERPINB4P48594 390 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 NUMBP49757 651 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 FKBP1BP68106 108 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms