RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 PPCSQ9HAB8 311 aa8.65□□□□□ -1.03
VAMP3-201ENST00000054666 SAMD15Q9P1V8 674 aa8.65□□□□□ -1.03
VAMP3-201ENST00000054666 CTNNAL1Q9UBT7 734 aa8.65□□□□□ -1.03
VAMP3-201ENST00000054666 PDCD11Q14690 1871 aaKnown RBP8.64□□□□□ -1.03
VAMP3-201ENST00000054666 TMEM120BA0PK00 339 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 DCAF8L1A6NGE4 600 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 M0QZ92 97 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 GRAP2O75791 330 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 ZNF865P0CJ78 1059 aaPredicted RBP8.64□□□□□ -1.03
VAMP3-201ENST00000054666 RBP3P10745 1247 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 AKAP5P24588 427 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 PHBP35232 272 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 MAGEA9P43362 315 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 TAF6P49848 677 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 ATP11AP98196 1134 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 SLC6A3Q01959 620 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 BST2Q10589 180 aaKnown RBP8.64□□□□□ -1.03
VAMP3-201ENST00000054666 PDIA2Q13087 525 aaKnown RBP8.64□□□□□ -1.03
VAMP3-201ENST00000054666 TMED2Q15363 201 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 ZBTB6Q15916 424 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 C15orf59Q2T9L4 293 aaPredicted RBP8.64□□□□□ -1.03
VAMP3-201ENST00000054666 BOLA3Q53S33 107 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 ARHGAP17Q68EM7 881 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 OLFML1Q6UWY5 402 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 YTHDF3Q7Z739 585 aaKnown RBP8.64□□□□□ -1.03
VAMP3-201ENST00000054666 CCDC13Q8IYE1 715 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 ZBED8Q8IZ13 594 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 ANKS4BQ8N8V4 417 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 STK32AQ8WU08 396 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 TEKT4Q8WW24 435 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 PRCCQ92733 491 aaPredicted RBP8.64□□□□□ -1.03
VAMP3-201ENST00000054666 PIWIL1Q96J94 861 aaKnown RBP8.64□□□□□ -1.03
VAMP3-201ENST00000054666 PEBP4Q96S96 227 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 APBA2Q99767 749 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 PRMT1Q99873 361 aaKnown RBP8.64□□□□□ -1.03
VAMP3-201ENST00000054666 CCDC134Q9H6E4 229 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 CDHR5Q9HBB8 845 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 KCNK9Q9NPC2 374 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 NKIRAS1Q9NYS0 192 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 SAE1Q9UBE0 346 aaPredicted RBP8.64□□□□□ -1.03
VAMP3-201ENST00000054666 TBK1Q9UHD2 729 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.64□□□□□ -1.03
VAMP3-201ENST00000054666 ANKRD65E5RJM6 399 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 HAS3O00219 553 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 TREHO43280 583 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 PFKMP08237 780 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 BRAFP15056 766 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 CYP2B6P20813 491 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 TGM2P21980 687 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 PSMC4P43686 418 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 IFNAR2P48551 515 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 ZNF157P51786 506 aaPredicted RBP8.64□□□□□ -1.03
VAMP3-201ENST00000054666 CRYBB1P53674 252 aaPredicted RBP8.64□□□□□ -1.03
VAMP3-201ENST00000054666 GDF10P55107 478 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 SLC8A3P57103 927 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 BASP1P80723 227 aaKnown RBP8.64□□□□□ -1.03
VAMP3-201ENST00000054666 TAF5Q15542 800 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 PKDCCQ504Y2 493 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 RNF187Q5TA31 235 aaPredicted RBP8.64□□□□□ -1.03
VAMP3-201ENST00000054666 TWF2Q6IBS0 349 aaKnown RBP8.64□□□□□ -1.03
VAMP3-201ENST00000054666 PMF1Q6P1K2 205 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 DARS2Q6PI48 645 aaKnown RBP8.64□□□□□ -1.03
VAMP3-201ENST00000054666 ARHGEF18Q6ZSZ5 1173 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 CCDC121Q6ZUS5 278 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 TADA2BQ86TJ2 420 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 TMEM110Q86TL2 294 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 C7orf31Q8N865 590 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 ATP11CQ8NB49 1132 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 APPL2Q8NEU8 664 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 MGARPQ8TDB4 240 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 PPP1R13LQ8WUF5 828 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 FAM172AQ8WUF8 416 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 TNIP3Q96KP6 325 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 SLC4A5Q9BY07 1137 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 FLRT1Q9NZU1 646 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 Q9Y3F1 56 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 FARP1Q9Y4F1 1045 aaPredicted RBP8.64□□□□□ -1.03
VAMP3-201ENST00000054666 ACTL7BQ9Y614 415 aa8.64□□□□□ -1.03
VAMP3-201ENST00000054666 SMIM28A0A1B0GU29 152 aa8.63□□□□□ -1.03
VAMP3-201ENST00000054666 GOLGA6L7A0A1B0GV03 622 aa8.63□□□□□ -1.03
VAMP3-201ENST00000054666 CFAP69A5D8W1 941 aa8.63□□□□□ -1.03
VAMP3-201ENST00000054666 KPNA7A9QM74 516 aa8.63□□□□□ -1.03
VAMP3-201ENST00000054666 RASA4BC9J798 803 aa8.63□□□□□ -1.03
VAMP3-201ENST00000054666 GOLGA8MH3BSY2 632 aa8.63□□□□□ -1.03
VAMP3-201ENST00000054666 H7C0C1 242 aa8.63□□□□□ -1.03
VAMP3-201ENST00000054666 IGF2BP3O00425 579 aaKnown RBP eCLIP8.63□□□□□ -1.03
VAMP3-201ENST00000054666 APOL1O14791 398 aa8.63□□□□□ -1.03
VAMP3-201ENST00000054666 TRIM66O15016 1216 aa8.63□□□□□ -1.03
VAMP3-201ENST00000054666 MDM4O15151 490 aa8.63□□□□□ -1.03
VAMP3-201ENST00000054666 RASA4O43374 803 aa8.63□□□□□ -1.03
VAMP3-201ENST00000054666 HUS1O60921 280 aa8.63□□□□□ -1.03
VAMP3-201ENST00000054666 VIMP08670 466 aaKnown RBP8.63□□□□□ -1.03
VAMP3-201ENST00000054666 KCNE1P15382 129 aa8.63□□□□□ -1.03
VAMP3-201ENST00000054666 ATP2A2P16615 1042 aaKnown RBP8.63□□□□□ -1.03
VAMP3-201ENST00000054666 DRD4P21917 467 aa8.63□□□□□ -1.03
VAMP3-201ENST00000054666 ADORA2BP29275 332 aa8.63□□□□□ -1.03
VAMP3-201ENST00000054666 STIP1P31948 543 aaKnown RBP8.63□□□□□ -1.03
VAMP3-201ENST00000054666 ACADSBP45954 432 aa8.63□□□□□ -1.03
VAMP3-201ENST00000054666 ATP5OP48047 213 aa8.63□□□□□ -1.03
VAMP3-201ENST00000054666 BEX3Q00994 111 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms