RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 RykQ01887 594 aa17.12■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Kctd21Q3URF8 260 aa17.12■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Fbxw10Q5SUS0 1030 aa17.12■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Hdac10Q6P3E7 666 aa17.12■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Gcfc2Q8BKT3 769 aa17.12■□□□□ 0.33
Ubr3-202ENSMUST00000112251 NarfQ9CYQ7 462 aa17.12■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Sgf29Q9DA08 293 aaKnown RBP17.12■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Uts2Q9QZQ3 123 aa17.12■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Rbck1Q9WUB0 508 aa17.12■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Kdm5cP41230 1554 aa17.12■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Gm3095E9Q058 166 aa17.12■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Trim67Q505D9 768 aa17.12■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Usp28Q5I043 1051 aa17.12■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Svs6Q64356 99 aa17.12■□□□□ 0.33
Ubr3-202ENSMUST00000112251 GmppbQ8BTZ7 360 aa17.12■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Slc38a7Q8BWH0 463 aa17.12■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Clip4Q8CI96 704 aa17.12■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Clptm1Q8VBZ3 664 aa17.12■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Tti1Q91V83 1085 aa17.12■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Tspan3Q9QY33 253 aa17.12■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Gm28168A0A087WNP1 180 aa17.12■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Mapk1P63085 358 aa17.12■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Trpv2Q9WTR1 756 aa17.12■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Myh3P13541 1940 aa17.12■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Alppl2P24823 529 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Fam83bQ0VBM2 1012 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Atp13a5Q3TYU2 1216 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Itga1Q3V3R4 1179 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Scn2bQ56A07 215 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Plekhg1F6S200 1446 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Setd4P58467 439 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Perm1Q149B8 807 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 LbrQ3U9G9 626 aaKnown RBP17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Bpifb5Q3UQ05 490 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Sel1l2Q3V172 688 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 SnrpaQ62189 287 aaKnown RBP17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Dedd2Q8QZV0 330 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Prpf3Q922U1 683 aaKnown RBP17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 RpainQ9CWY9 219 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 PmpcbQ9CXT8 489 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Cmtm6Q9CZ69 183 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Pou5f2Q9DAC9 329 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Rhox3cA2AWM0 215 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Rhox3hL7MU37 215 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Rhox3aQ4TU90 215 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 PodxlQ9R0M4 503 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 PfklP12382 780 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Qrich1Q3UA37 777 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Galnt18Q8K1B9 622 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Tspan8Q8R3G9 235 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 AdigQ8R400 80 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Snx9Q91VH2 595 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 GhdcQ99J23 532 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Ddx56Q9D0R4 546 aaKnown RBP17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Kdm5bQ80Y84 1544 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Sult6b2B7ZWN4 290 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 AfmO89020 608 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Mt-CybP00158 381 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 AcadlP51174 430 aaKnown RBP17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Adck2Q6NSR3 617 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Ccdc134Q8C7V8 229 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 ScaiQ8C8N2 606 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Kctd2Q8CEZ0 266 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Mkl1Q8K4J6 964 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Tspyl4Q8VD63 406 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Cyp4a12bA2A974 508 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Gnat1P20612 350 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Wee1P47810 646 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Vbp1P61759 196 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 FaxcQ3UMF9 409 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Baiap2l2Q80Y61 522 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Scara3Q8C850 606 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 FggQ8VCM7 436 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Cyp4a12aQ91WL5 508 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Msh4Q99MT2 958 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Gtf3c6Q9D8P7 227 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Osbpl3Q9DBS9 855 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 PtprgQ05909 1442 aa17.11■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Ccdc120A2AEV7 629 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Ppef2O35385 757 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Senp7Q8BUH8 1037 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Dnajc5gQ8C632 165 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 ItchQ8C863 864 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Ube2sQ921J4 223 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Ggt7Q99JP7 662 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Hao1Q9WU19 370 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Crybg2B7ZCC2 1516 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Neo1P97798 1493 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Gm5565A0A0G2JGB2 317 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Krt40Q6IFX3 439 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Ttc25Q9D4B2 624 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Nphs1Q9QZS7 1256 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Clcn2Q9R0A1 908 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Nfe2l3Q9WTM4 660 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Abcb11Q9QY30 1321 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Asprv1Q09PK2 339 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Tmc8Q7TN58 722 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Arhgap6O54834 987 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Mxi1P50540 228 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Awat2Q6E1M8 333 aa17.1■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 29.4 ms