RNA–Protein interactions for RNA: YNR004W

SWM2, Transcript of Protein with a role in snRNA and snoRNA cap trimethylation, yeastyeast

Gene SWM2, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWM2YNR004W BNI1P41832 1953 aa0.45□□□□□ -2.34
SWM2YNR004W CCW14O13547 238 aa0.45□□□□□ -2.34
SWM2YNR004W SNA2P56508 79 aa0.45□□□□□ -2.34
SWM2YNR004W YOS1Q3E834 85 aa0.45□□□□□ -2.34
SWM2YNR004W YNL190WP53872 204 aa0.44□□□□□ -2.34
SWM2YNR004W SEC16P48415 2195 aaKnown RBP0.44□□□□□ -2.34
SWM2YNR004W TY1B-HO13535 1793 aa0.43□□□□□ -2.34
SWM2YNR004W GNA1P43577 159 aaPredicted RBP0.43□□□□□ -2.34
SWM2YNR004W SPP41P38904 1435 aa0.43□□□□□ -2.34
SWM2YNR004W BUD23P25627 275 aaPredicted RBP0.42□□□□□ -2.34
SWM2YNR004W YBR292CP38357 123 aa0.42□□□□□ -2.34
SWM2YNR004W PAU20Q08322 120 aa0.42□□□□□ -2.34
SWM2YNR004W YCR095W-AQ3E787 52 aa0.42□□□□□ -2.34
SWM2YNR004W RPO41P13433 1351 aaKnown RBP0.42□□□□□ -2.34
SWM2YNR004W TY4B-HP0C2J7 1802 aa0.41□□□□□ -2.34
SWM2YNR004W RPA12P32529 125 aaKnown RBP0.41□□□□□ -2.34
SWM2YNR004W YMR090WQ04304 227 aaKnown RBP0.41□□□□□ -2.34
SWM2YNR004W ICY1Q04329 127 aa0.41□□□□□ -2.34
SWM2YNR004W RPS11AP0CX47 156 aaKnown RBP0.4□□□□□ -2.35
SWM2YNR004W RPS11BP0CX48 156 aaKnown RBP0.4□□□□□ -2.35
SWM2YNR004W YNL198CP40166 100 aa0.4□□□□□ -2.35
SWM2YNR004W MRX7P53869 86 aa0.4□□□□□ -2.35
SWM2YNR004W YLR419WQ06698 1435 aaKnown RBP0.39□□□□□ -2.35
SWM2YNR004W SNF2P22082 1703 aa0.39□□□□□ -2.35
SWM2YNR004W SRB8P25648 1427 aa0.38□□□□□ -2.35
SWM2YNR004W YMR103CQ04436 120 aa0.38□□□□□ -2.35
SWM2YNR004W MIC10Q96VH5 97 aa0.38□□□□□ -2.35
SWM2YNR004W BRR2P32639 2163 aaKnown RBP0.38□□□□□ -2.35
SWM2YNR004W FAS2P19097 1887 aaKnown RBP0.37□□□□□ -2.35
SWM2YNR004W YER039C-AP0CD97 72 aa0.37□□□□□ -2.35
SWM2YNR004W PDX3P38075 228 aaKnown RBP0.37□□□□□ -2.35
SWM2YNR004W RGI1P40043 161 aaPredicted RBP0.37□□□□□ -2.35
SWM2YNR004W AIM19P40502 157 aa0.37□□□□□ -2.35
SWM2YNR004W RPS12P48589 143 aaKnown RBP0.37□□□□□ -2.35
SWM2YNR004W PAU1P0CE88 120 aa0.36□□□□□ -2.35
SWM2YNR004W PAU14P0CE89 120 aa0.36□□□□□ -2.35
SWM2YNR004W PAU6P0CE90 120 aa0.36□□□□□ -2.35
SWM2YNR004W PAU18P0CE91 120 aa0.36□□□□□ -2.35
SWM2YNR004W PAU8P0CE92 120 aa0.36□□□□□ -2.35
SWM2YNR004W PAU11P0CE93 120 aa0.36□□□□□ -2.35
SWM2YNR004W PAU13P38725 120 aa0.36□□□□□ -2.35
SWM2YNR004W EMC5P40540 141 aa0.36□□□□□ -2.35
SWM2YNR004W PAU10Q03050 120 aa0.36□□□□□ -2.35
SWM2YNR004W PAU9Q3E770 120 aa0.36□□□□□ -2.35
SWM2YNR004W YRF1-6P53819 1859 aa0.35□□□□□ -2.35
SWM2YNR004W SEC7P11075 2009 aaKnown RBP0.35□□□□□ -2.35
SWM2YNR004W RSM18P40033 138 aa0.35□□□□□ -2.35
SWM2YNR004W LYS2P07702 1392 aa0.34□□□□□ -2.35
SWM2YNR004W UBC4P15731 148 aa0.34□□□□□ -2.36
SWM2YNR004W MRPL38P35996 138 aaPredicted RBP0.34□□□□□ -2.36
SWM2YNR004W SGF11Q03067 99 aa0.34□□□□□ -2.36
SWM2YNR004W YDR210WQ03482 75 aa0.34□□□□□ -2.36
SWM2YNR004W YJR107C-AP0CT86 78 aa0.33□□□□□ -2.36
SWM2YNR004W YBR090CP38253 122 aa0.33□□□□□ -2.36
SWM2YNR004W RPL38P49167 78 aaKnown RBP0.33□□□□□ -2.36
SWM2YNR004W PAU4P53427 120 aa0.33□□□□□ -2.36
SWM2YNR004W MYO1P08964 1928 aa0.32□□□□□ -2.36
SWM2YNR004W LHP1P33399 275 aaKnown RBP0.32□□□□□ -2.36
SWM2YNR004W RPC10P40422 70 aa0.32□□□□□ -2.36
SWM2YNR004W MIX14Q04341 121 aa0.32□□□□□ -2.36
SWM2YNR004W TAO3P40468 2376 aa0.31□□□□□ -2.36
SWM2YNR004W UBC5P15732 148 aa0.31□□□□□ -2.36
SWM2YNR004W PAU5P43575 122 aa0.31□□□□□ -2.36
SWM2YNR004W YNR034W-AQ3E841 98 aa0.31□□□□□ -2.36
SWM2YNR004W YIL134C-AQ45U18 67 aa0.31□□□□□ -2.36
SWM2YNR004W SSN2P38931 1420 aa0.3□□□□□ -2.36
SWM2YNR004W YFR009W-AP0C5M9 85 aa0.3□□□□□ -2.36
SWM2YNR004W ROX3P25046 220 aa0.3□□□□□ -2.36
SWM2YNR004W YHL005CP38752 130 aa0.3□□□□□ -2.36
SWM2YNR004W SNU13P39990 126 aaKnown RBP0.3□□□□□ -2.36
SWM2YNR004W KRE5P22023 1365 aa0.3□□□□□ -2.36
SWM2YNR004W YBL071CP38185 102 aa0.29□□□□□ -2.36
SWM2YNR004W YER137CP40083 148 aaKnown RBP0.29□□□□□ -2.36
SWM2YNR004W URB1P34241 1764 aaKnown RBP0.28□□□□□ -2.36
SWM2YNR004W RSM19P53733 91 aaPredicted RBP0.28□□□□□ -2.36
SWM2YNR004W HMRA1P0CY11 126 aa0.27□□□□□ -2.37
SWM2YNR004W TSC11P40061 1430 aa0.27□□□□□ -2.37
SWM2YNR004W POL2P21951 2222 aaKnown RBP0.25□□□□□ -2.37
SWM2YNR004W GEA1P47102 1408 aaPredicted RBP0.25□□□□□ -2.37
SWM2YNR004W COX7P10174 60 aa0.25□□□□□ -2.37
SWM2YNR004W YBR016WP38216 128 aa0.24□□□□□ -2.37
SWM2YNR004W SPC1P46965 94 aa0.24□□□□□ -2.37
SWM2YNR004W GEA2P39993 1459 aaKnown RBP0.23□□□□□ -2.37
SWM2YNR004W TOM6P33448 61 aa0.23□□□□□ -2.37
SWM2YNR004W NHP10Q03435 203 aa0.23□□□□□ -2.37
SWM2YNR004W YOR289WQ12012 251 aaPredicted RBP0.23□□□□□ -2.37
SWM2YNR004W FYV7Q12247 151 aa0.23□□□□□ -2.37
SWM2YNR004W YNL042W-BQ3E7Z2 85 aa0.23□□□□□ -2.37
SWM2YNR004W SUS1Q6WNK7 96 aa0.23□□□□□ -2.37
SWM2YNR004W KSH1Q8TGJ3 72 aa0.23□□□□□ -2.37
SWM2YNR004W YKL068W-AQ3E826 78 aa0.22□□□□□ -2.37
SWM2YNR004W YHR214C-DP0CX93 97 aa0.21□□□□□ -2.38
SWM2YNR004W NHP2P32495 156 aaPredicted RBP0.21□□□□□ -2.38
SWM2YNR004W MHF2Q3E829 80 aa0.21□□□□□ -2.38
SWM2YNR004W Q0032Q9ZZX7 96 aa0.21□□□□□ -2.38
SWM2YNR004W BSC4P53841 131 aa0.2□□□□□ -2.38
SWM2YNR004W ZEO1Q08245 113 aa0.2□□□□□ -2.38
SWM2YNR004W YDR029WQ12111 104 aa0.2□□□□□ -2.38
SWM2YNR004W TY3B-IQ7LHG5 1498 aaKnown RBP0.2□□□□□ -2.38
SWM2YNR004W CAT8P39113 1433 aa0.2□□□□□ -2.38
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms