RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 GREB1Q4ZG55 1949 aa18.37■□□□□ 0.53
PHGDH-227ENST00000641811 C2orf78A6NCI8 922 aa18.36■□□□□ 0.53
PHGDH-227ENST00000641811 DPYSL4O14531 572 aa18.36■□□□□ 0.53
PHGDH-227ENST00000641811 TNFRSF10BO14763 440 aa18.36■□□□□ 0.53
PHGDH-227ENST00000641811 OBSL1O75147 1896 aa18.36■□□□□ 0.53
PHGDH-227ENST00000641811 PSMC3P17980 439 aa18.36■□□□□ 0.53
PHGDH-227ENST00000641811 GDI1P31150 447 aa18.36■□□□□ 0.53
PHGDH-227ENST00000641811 MAP3K7CLP57077 242 aa18.36■□□□□ 0.53
PHGDH-227ENST00000641811 HSP90AA4PQ58FG1 418 aa18.36■□□□□ 0.53
PHGDH-227ENST00000641811 RBM43Q6ZSC3 357 aaKnown RBP18.36■□□□□ 0.53
PHGDH-227ENST00000641811 NUP93Q8N1F7 819 aa18.36■□□□□ 0.53
PHGDH-227ENST00000641811 EHBP1Q8NDI1 1231 aa18.36■□□□□ 0.53
PHGDH-227ENST00000641811 SCAMP5Q8TAC9 235 aa18.36■□□□□ 0.53
PHGDH-227ENST00000641811 KAT5Q92993 513 aa18.36■□□□□ 0.53
PHGDH-227ENST00000641811 TMEM176AQ96HP8 235 aa18.36■□□□□ 0.53
PHGDH-227ENST00000641811 BRD9Q9H8M2 597 aa18.36■□□□□ 0.53
PHGDH-227ENST00000641811 ARHGEF3Q9NR81 526 aa18.36■□□□□ 0.53
PHGDH-227ENST00000641811 CCL26Q9Y258 94 aa18.36■□□□□ 0.53
PHGDH-227ENST00000641811 ZDBF2Q9HCK1 2354 aa18.35■□□□□ 0.53
PHGDH-227ENST00000641811 DENND4CQ5VZ89 1909 aa18.35■□□□□ 0.53
PHGDH-227ENST00000641811 STK25O00506 426 aa18.35■□□□□ 0.53
PHGDH-227ENST00000641811 P4HA2O15460 535 aa18.35■□□□□ 0.53
PHGDH-227ENST00000641811 PI15O43692 258 aa18.35■□□□□ 0.53
PHGDH-227ENST00000641811 MBD3O95983 291 aa18.35■□□□□ 0.53
PHGDH-227ENST00000641811 FAM200BP0CF97 657 aa18.35■□□□□ 0.53
PHGDH-227ENST00000641811 DDX6P26196 483 aaKnown RBP eCLIP18.35■□□□□ 0.53
PHGDH-227ENST00000641811 ERCC5P28715 1186 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-227ENST00000641811 WEE1P30291 646 aa18.35■□□□□ 0.53
PHGDH-227ENST00000641811 AVPR1AP37288 418 aa18.35■□□□□ 0.53
PHGDH-227ENST00000641811 TAF10Q12962 218 aa18.35■□□□□ 0.53
PHGDH-227ENST00000641811 SLC44A4Q53GD3 710 aa18.35■□□□□ 0.53
PHGDH-227ENST00000641811 PPP1R26Q5T8A7 1209 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-227ENST00000641811 CWF19L1Q69YN2 538 aaKnown RBP18.35■□□□□ 0.53
PHGDH-227ENST00000641811 ARHGEF19Q8IW93 802 aa18.35■□□□□ 0.53
PHGDH-227ENST00000641811 UBR7Q8N806 425 aa18.35■□□□□ 0.53
PHGDH-227ENST00000641811 DEPDC1BQ8WUY9 529 aa18.35■□□□□ 0.53
PHGDH-227ENST00000641811 USP13Q92995 863 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-227ENST00000641811 JAKMIP2Q96AA8 810 aa18.35■□□□□ 0.53
PHGDH-227ENST00000641811 E2F7Q96AV8 911 aa18.35■□□□□ 0.53
PHGDH-227ENST00000641811 NT5C1BQ96P26 610 aa18.35■□□□□ 0.53
PHGDH-227ENST00000641811 CSNK1G1Q9HCP0 422 aa18.35■□□□□ 0.53
PHGDH-227ENST00000641811 TRPM5Q9NZQ8 1165 aa18.35■□□□□ 0.53
PHGDH-227ENST00000641811 DACH1Q9UI36 760 aa18.35■□□□□ 0.53
PHGDH-227ENST00000641811 TRIM21P19474 475 aaKnown RBP18.34■□□□□ 0.53
PHGDH-227ENST00000641811 YWHAQP27348 245 aa18.34■□□□□ 0.53
PHGDH-227ENST00000641811 AVPR2P30518 371 aa18.34■□□□□ 0.53
PHGDH-227ENST00000641811 MTIF2P46199 727 aaKnown RBP18.34■□□□□ 0.53
PHGDH-227ENST00000641811 SLC5A3P53794 718 aa18.34■□□□□ 0.53
PHGDH-227ENST00000641811 PFKPQ01813 784 aa18.34■□□□□ 0.53
PHGDH-227ENST00000641811 CETN1Q12798 172 aa18.34■□□□□ 0.53
PHGDH-227ENST00000641811 ASTLQ6HA08 431 aaPredicted RBP18.34■□□□□ 0.53
PHGDH-227ENST00000641811 CLEC20AQ6ZU45 233 aa18.34■□□□□ 0.53
PHGDH-227ENST00000641811 RRAGAQ7L523 313 aa18.34■□□□□ 0.53
PHGDH-227ENST00000641811 GPRIN1Q7Z2K8 1008 aa18.34■□□□□ 0.53
PHGDH-227ENST00000641811 YAF2Q8IY57 180 aa18.34■□□□□ 0.53
PHGDH-227ENST00000641811 PPM1KQ8N3J5 372 aa18.34■□□□□ 0.53
PHGDH-227ENST00000641811 TTC39CQ8N584 583 aa18.34■□□□□ 0.53
PHGDH-227ENST00000641811 ARL14EPQ8N8R7 260 aaPredicted RBP18.34■□□□□ 0.53
PHGDH-227ENST00000641811 TMEM105Q8N8V8 129 aa18.34■□□□□ 0.53
PHGDH-227ENST00000641811 RIN3Q8TB24 985 aa18.34■□□□□ 0.53
PHGDH-227ENST00000641811 ZFYVE19Q96K21 471 aa18.34■□□□□ 0.53
PHGDH-227ENST00000641811 CRACR2AQ9BSW2 395 aa18.34■□□□□ 0.53
PHGDH-227ENST00000641811 INTS2Q9H0H0 1204 aaKnown RBP18.34■□□□□ 0.53
PHGDH-227ENST00000641811 THAP9Q9H5L6 903 aa18.34■□□□□ 0.53
PHGDH-227ENST00000641811 TBC1D17Q9HA65 648 aa18.34■□□□□ 0.53
PHGDH-227ENST00000641811 HEBP1Q9NRV9 189 aa18.34■□□□□ 0.53
PHGDH-227ENST00000641811 TDP1Q9NUW8 608 aa18.34■□□□□ 0.53
PHGDH-227ENST00000641811 NUP210Q8TEM1 1887 aaPredicted RBP18.34■□□□□ 0.53
PHGDH-227ENST00000641811 ZNF840PA6NDX5 716 aa18.33■□□□□ 0.52
PHGDH-227ENST00000641811 ZNF263O14978 683 aa18.33■□□□□ 0.52
PHGDH-227ENST00000641811 RTN3O95197 1032 aaPredicted RBP18.33■□□□□ 0.52
PHGDH-227ENST00000641811 ABL1P00519 1130 aa18.33■□□□□ 0.52
PHGDH-227ENST00000641811 CD72P21854 359 aa18.33■□□□□ 0.52
PHGDH-227ENST00000641811 TBXAS1P24557 533 aaPredicted RBP18.33■□□□□ 0.52
PHGDH-227ENST00000641811 FCHO2Q0JRZ9 810 aa18.33■□□□□ 0.52
PHGDH-227ENST00000641811 MLF2Q15773 248 aaPredicted RBP18.33■□□□□ 0.52
PHGDH-227ENST00000641811 CELF5Q8N6W0 485 aaKnown RBP18.33■□□□□ 0.52
PHGDH-227ENST00000641811 TTC16Q8NEE8 873 aa18.33■□□□□ 0.52
PHGDH-227ENST00000641811 BPIFB1Q8TDL5 484 aa18.33■□□□□ 0.52
PHGDH-227ENST00000641811 FBXO32Q969P5 355 aa18.33■□□□□ 0.52
PHGDH-227ENST00000641811 SAMSN1Q9NSI8 373 aaKnown RBP18.33■□□□□ 0.52
PHGDH-227ENST00000641811 OBP2AQ9NY56 170 aa18.33■□□□□ 0.52
PHGDH-227ENST00000641811 EHD2Q9NZN4 543 aa18.33■□□□□ 0.52
PHGDH-227ENST00000641811 GCNT4Q9P109 453 aa18.33■□□□□ 0.52
PHGDH-227ENST00000641811 CHORDC1Q9UHD1 332 aaPredicted RBP18.33■□□□□ 0.52
PHGDH-227ENST00000641811 ZMYM5Q9UJ78 669 aa18.33■□□□□ 0.52
PHGDH-227ENST00000641811 TRAV19A0A0A6YYK7 116 aa18.32■□□□□ 0.52
PHGDH-227ENST00000641811 SOBPA7XYQ1 873 aa18.32■□□□□ 0.52
PHGDH-227ENST00000641811 HHLA1C9JL84 531 aa18.32■□□□□ 0.52
PHGDH-227ENST00000641811 CALCAP01258 141 aa18.32■□□□□ 0.52
PHGDH-227ENST00000641811 CKMP06732 381 aa18.32■□□□□ 0.52
PHGDH-227ENST00000641811 HDCP19113 662 aa18.32■□□□□ 0.52
PHGDH-227ENST00000641811 ACO1P21399 889 aaKnown RBP18.32■□□□□ 0.52
PHGDH-227ENST00000641811 RFX1P22670 979 aa18.32■□□□□ 0.52
PHGDH-227ENST00000641811 YWHAEP62258 255 aaKnown RBP18.32■□□□□ 0.52
PHGDH-227ENST00000641811 CCDC183Q5T5S1 534 aa18.32■□□□□ 0.52
PHGDH-227ENST00000641811 PHLDB3Q6NSJ2 640 aa18.32■□□□□ 0.52
PHGDH-227ENST00000641811 TTC8Q8TAM2 541 aa18.32■□□□□ 0.52
PHGDH-227ENST00000641811 IRF7Q92985 503 aa18.32■□□□□ 0.52
PHGDH-227ENST00000641811 SLITRK1Q96PX8 696 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms