RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 FKBP9O95302 570 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 PGM3O95394 542 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 BAG4O95429 457 aaKnown RBP3.22□□□□□ -1.89
VIM-210ENST00000637053 LARGE1O95461 756 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 PLGP00747 810 aaPredicted RBP3.22□□□□□ -1.89
VIM-210ENST00000637053 GSNP06396 782 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 SYPP08247 313 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 VIMP08670 466 aaKnown RBP3.22□□□□□ -1.89
VIM-210ENST00000637053 NR2F1P10589 423 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 VAV1P15498 845 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 CSF2RAP15509 400 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 ZNF3P17036 446 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 PTPN2P17706 415 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 PFKLP17858 780 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 JAK1P23458 1154 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 CHMP24386 653 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 ARL4AP40617 200 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 MAPKAPK2P49137 400 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 VPS41P49754 854 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 CCNHP51946 323 aaPredicted RBP3.22□□□□□ -1.89
VIM-210ENST00000637053 RWDD2BP57060 319 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 RPS26P62854 115 aaKnown RBP3.22□□□□□ -1.89
VIM-210ENST00000637053 TUBA1BP68363 451 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 CYP4F8P98187 520 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 TLE2Q04725 743 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 RUNX1T1Q06455 604 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 GABPB1Q06547 395 aaPredicted RBP3.22□□□□□ -1.89
VIM-210ENST00000637053 GRSF1Q12849 480 aaKnown RBP eCLIP3.22□□□□□ -1.89
VIM-210ENST00000637053 AIMP1Q12904 312 aaKnown RBP3.22□□□□□ -1.89
VIM-210ENST00000637053 MAPK7Q13164 816 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 ACVR2BQ13705 512 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 LAMB3Q13751 1172 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 MPP2Q14168 576 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 ATP2B3Q16720 1220 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 TSTQ16762 297 aaKnown RBP3.22□□□□□ -1.89
VIM-210ENST00000637053 TMEM266Q2M3C6 531 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 CCDC57Q2TAC2 916 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 C2orf76Q3KRA6 126 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 TBC1D25Q3MII6 688 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 XKR9Q5GH70 373 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 KCNT1Q5JUK3 1230 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 RNF220Q5VTB9 566 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 TMEM154Q6P9G4 183 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 B3GNT6Q6ZMB0 384 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 PPP1R21Q6ZMI0 780 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 AGMOQ6ZNB7 445 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 TUBA1AQ71U36 451 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 FKBP9P1Q75LS8 142 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 TMC3Q7Z5M5 1100 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 MTDHQ86UE4 582 aaKnown RBP3.22□□□□□ -1.89
VIM-210ENST00000637053 CCDC83Q8IWF9 413 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 THNSL1Q8IYQ7 743 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 GRAMD1CQ8IYS0 662 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 FAM9CQ8IZT9 166 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 GALNT15Q8N3T1 639 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 TCP11L2Q8N4U5 519 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 TTC39CQ8N584 583 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 TSPYL6Q8N831 410 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 FAM71DQ8N9W8 422 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 ATG16L2Q8NAA4 619 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 ZBTB8BQ8NAP8 495 aaPredicted RBP3.22□□□□□ -1.89
VIM-210ENST00000637053 ATP11CQ8NB49 1132 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 SLC4A11Q8NBS3 891 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 GSTCDQ8NEC7 633 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 CHST13Q8NET6 341 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 Q8NFD4 153 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 OR56B2PQ8NGI1 322 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 CEP70Q8NHQ1 597 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 PIGOQ8TEQ8 1089 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 CHTF18Q8WVB6 975 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 HERVK_113Q902F9 699 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 DVL3Q92997 716 aaPredicted RBP3.22□□□□□ -1.89
VIM-210ENST00000637053 ZUFSPQ96AP4 578 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 DHX58Q96C10 678 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 SCLYQ96I15 445 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 ATP6V1G3Q96LB4 118 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 ACAP3Q96P50 834 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 LENG8Q96PV6 779 aaPredicted RBP3.22□□□□□ -1.89
VIM-210ENST00000637053 GAL3ST1Q99999 423 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 PYM1Q9BRP8 204 aaKnown RBP3.22□□□□□ -1.89
VIM-210ENST00000637053 AARSD1Q9BTE6 412 aaKnown RBP3.22□□□□□ -1.89
VIM-210ENST00000637053 CNPPD1Q9BV87 410 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 BRIP1Q9BX63 1249 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 OSBPL10Q9BXB5 764 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 B3GNT5Q9BYG0 378 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 GCOM2Q9BZD3 368 aaPredicted RBP3.22□□□□□ -1.89
VIM-210ENST00000637053 TRPV6Q9H1D0 765 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 PNNQ9H307 717 aaKnown RBP3.22□□□□□ -1.89
VIM-210ENST00000637053 SLC52A2Q9HAB3 445 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 DDX4Q9NQI0 724 aaKnown RBP3.22□□□□□ -1.89
VIM-210ENST00000637053 SERINC1Q9NRX5 453 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 LRFN1Q9P244 771 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 KIF17Q9P2E2 1029 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 TNFRSF10DQ9UBN6 386 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 MALT1Q9UDY8 824 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 FETUBQ9UGM5 382 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 TEKT2Q9UIF3 430 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 PADI4Q9UM07 663 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 L1RE1Q9UN81 338 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 ARHGAP26Q9UNA1 814 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms