RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 C4orf50Q6ZRC1 276 aa12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 CLEC20AQ6ZU45 233 aa12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 FAM183BPQ6ZVS7 135 aa12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 PAQR9Q6ZVX9 377 aa12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 FAM35AQ86V20 835 aa12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 ZNF280BQ86YH2 543 aa12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 RCOR2Q8IZ40 523 aa12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 C12orf50Q8NA57 414 aaPredicted RBP12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 NOA1Q8NC60 698 aaKnown RBP12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 DIS3LQ8TF46 1054 aaKnown RBP12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 HNRNPLLQ8WVV9 542 aaKnown RBP12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 FUBP3Q96I24 572 aaKnown RBP eCLIP12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 BTBD6Q96KE9 485 aa12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 RTP3Q9BQQ7 232 aa12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 TRIM7Q9C029 511 aa12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 NRDE2Q9H7Z3 1164 aa12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 ANKZF1Q9H8Y5 726 aa12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 CNGB3Q9NQW8 809 aa12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 ST7Q9NRC1 585 aa12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 CHORDC1Q9UHD1 332 aaPredicted RBP12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 ADAM28Q9UKQ2 775 aa12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 MTUS1Q9ULD2 1270 aa12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 ATP11BQ9Y2G3 1177 aa12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 OR6C75A6NL08 312 aa12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 ZNF487B1APH4 448 aa12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 KRIT1O00522 736 aa12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 PAPSS1O43252 624 aaPredicted RBP12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 HSF2BPO75031 334 aa12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 MYCP01106 439 aaPredicted RBP12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 FGGP02679 453 aa12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 ALDH2P05091 517 aa12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 HSPA1AP0DMV8 641 aaKnown RBP12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 HSPA1BP0DMV9 641 aaKnown RBP12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 ADORA2BP29275 332 aa12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 CYP2C18P33260 490 aa12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 DHX34Q14147 1143 aaKnown RBP12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 MRPL58Q14197 206 aaKnown RBP12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 NFE2Q16621 373 aaPredicted RBP12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 MDH1BQ5I0G3 518 aa12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 OR6B2Q6IFH4 312 aa12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 C8orf74Q6P047 294 aa12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 LLGL2Q6P1M3 1020 aa12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 CC2D1AQ6P1N0 951 aaPredicted RBP12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 BEND5Q7L4P6 421 aa12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 SLC13A5Q86YT5 568 aaPredicted RBP12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 DCP1BQ8IZD4 617 aaKnown RBP12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 TMEM199Q8N511 208 aa12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 TEKT4Q8WW24 435 aa12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 IRGQQ8WZA9 623 aa12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 PCED1BQ96HM7 432 aa12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 SCLYQ96I15 445 aa12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 PAWRQ96IZ0 340 aaKnown RBP12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 MS4A14Q96JA4 679 aa12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 CEP295NLQ96MC4 621 aa12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 TBCBQ99426 244 aa12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 B3GNT5Q9BYG0 378 aa12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 PRDM10Q9NQV6 1147 aa12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 RBM12Q9NTZ6 932 aaKnown RBP12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 RRN3Q9NYV6 651 aa12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 STK39Q9UEW8 545 aa12.91□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 GOLGA8SH3BPF8 625 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 LRCH4O75427 683 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 ERLIN1O75477 346 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 DAB1O75553 588 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 DGKIO75912 1065 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 ZRANB2O95218 330 aaKnown RBP eCLIP12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 EFEMP2O95967 443 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 FGFR3P22607 806 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 CHRNA3P32297 505 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 BRCC3P46736 316 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 OR1G1P47890 313 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 FNTAP49354 379 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 DNA2P51530 1060 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 CCL23P55773 120 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 OGDHQ02218 1023 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 SLC25A11Q02978 314 aaKnown RBP12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 C2orf54Q08AI8 447 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 LONRF2Q1L5Z9 754 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 LRRC26Q2I0M4 334 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 MAP9Q49MG5 647 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 KIAA0319Q5VV43 1072 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 MFSD5Q6N075 450 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 MAATS1Q7Z4T9 603 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 UBE2Q1Q7Z7E8 422 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 PIGZQ86VD9 579 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 GPR65Q8IYL9 337 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 CCDC26Q8TAB7 109 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 JOSD2Q8TAC2 188 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 C2orf15Q8WU43 125 aaKnown RBP12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 SLCO2A1Q92959 643 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 MED10Q9BTT4 135 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 PARD6BQ9BYG5 372 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 FRMD8P1Q9BZ68 369 aaPredicted RBP12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 PPP1R12CQ9BZL4 782 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 ZCWPW1Q9H0M4 648 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 DMAP1Q9NPF5 467 aaPredicted RBP12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 KRT82Q9NSB4 513 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 STIM2Q9P246 746 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 CACNG4Q9UBN1 327 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 TJP2Q9UDY2 1190 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms