RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 CSNK1G1Q9HCP0 422 aa17.75■□□□□ 0.43
SSBP4-213ENST00000602088 KRT82Q9NSB4 513 aa17.75■□□□□ 0.43
SSBP4-213ENST00000602088 OBP2AQ9NY56 170 aa17.75■□□□□ 0.43
SSBP4-213ENST00000602088 CA14Q9ULX7 337 aa17.75■□□□□ 0.43
SSBP4-213ENST00000602088 NUP210Q8TEM1 1887 aaPredicted RBP17.75■□□□□ 0.43
SSBP4-213ENST00000602088 ZNF638Q14966 1978 aaKnown RBP17.74■□□□□ 0.43
SSBP4-213ENST00000602088 TNFRSF10BO14763 440 aa17.74■□□□□ 0.43
SSBP4-213ENST00000602088 PRAMEF12O95522 483 aa17.74■□□□□ 0.43
SSBP4-213ENST00000602088 NPR3P17342 541 aa17.74■□□□□ 0.43
SSBP4-213ENST00000602088 ADORA2BP29275 332 aa17.74■□□□□ 0.43
SSBP4-213ENST00000602088 RAD23BP54727 409 aa17.74■□□□□ 0.43
SSBP4-213ENST00000602088 PFKPQ01813 784 aa17.74■□□□□ 0.43
SSBP4-213ENST00000602088 TPD52L1Q16890 204 aaPredicted RBP17.74■□□□□ 0.43
SSBP4-213ENST00000602088 IER5LQ5T953 404 aa17.74■□□□□ 0.43
SSBP4-213ENST00000602088 NUP93Q8N1F7 819 aa17.74■□□□□ 0.43
SSBP4-213ENST00000602088 SLC4A11Q8NBS3 891 aa17.74■□□□□ 0.43
SSBP4-213ENST00000602088 ZMIZ2Q8NF64 920 aa17.74■□□□□ 0.43
SSBP4-213ENST00000602088 TMEM176AQ96HP8 235 aa17.74■□□□□ 0.43
SSBP4-213ENST00000602088 LRRC3BQ96PB8 259 aa17.74■□□□□ 0.43
SSBP4-213ENST00000602088 SMOQ99835 787 aa17.74■□□□□ 0.43
SSBP4-213ENST00000602088 MFSD1Q9H3U5 465 aa17.74■□□□□ 0.43
SSBP4-213ENST00000602088 BRD9Q9H8M2 597 aa17.74■□□□□ 0.43
SSBP4-213ENST00000602088 ZNF318Q5VUA4 2279 aa17.74■□□□□ 0.43
SSBP4-213ENST00000602088 ANAPC1Q9H1A4 1944 aa17.73■□□□□ 0.43
SSBP4-213ENST00000602088 DPYSL4O14531 572 aa17.73■□□□□ 0.43
SSBP4-213ENST00000602088 BEST1O76090 585 aa17.73■□□□□ 0.43
SSBP4-213ENST00000602088 RTN3O95197 1032 aaPredicted RBP17.73■□□□□ 0.43
SSBP4-213ENST00000602088 FAM200BP0CF97 657 aa17.73■□□□□ 0.43
SSBP4-213ENST00000602088 TBXAS1P24557 533 aaPredicted RBP17.73■□□□□ 0.43
SSBP4-213ENST00000602088 GDI1P31150 447 aa17.73■□□□□ 0.43
SSBP4-213ENST00000602088 AVPR1AP37288 418 aa17.73■□□□□ 0.43
SSBP4-213ENST00000602088 MAP3K7CLP57077 242 aa17.73■□□□□ 0.43
SSBP4-213ENST00000602088 YWHAEP62258 255 aaKnown RBP17.73■□□□□ 0.43
SSBP4-213ENST00000602088 FCHO2Q0JRZ9 810 aa17.73■□□□□ 0.43
SSBP4-213ENST00000602088 SLC44A4Q53GD3 710 aa17.73■□□□□ 0.43
SSBP4-213ENST00000602088 CELF5Q8N6W0 485 aaKnown RBP17.73■□□□□ 0.43
SSBP4-213ENST00000602088 UBR7Q8N806 425 aa17.73■□□□□ 0.43
SSBP4-213ENST00000602088 HEXIM2Q96MH2 286 aaKnown RBP17.73■□□□□ 0.43
SSBP4-213ENST00000602088 NT5C1BQ96P26 610 aa17.73■□□□□ 0.43
SSBP4-213ENST00000602088 SMG9Q9H0W8 520 aaKnown RBP17.73■□□□□ 0.43
SSBP4-213ENST00000602088 THAP9Q9H5L6 903 aa17.73■□□□□ 0.43
SSBP4-213ENST00000602088 ARHGEF3Q9NR81 526 aa17.73■□□□□ 0.43
SSBP4-213ENST00000602088 IL37Q9NZH6 218 aa17.73■□□□□ 0.43
SSBP4-213ENST00000602088 TRPM5Q9NZQ8 1165 aa17.73■□□□□ 0.43
SSBP4-213ENST00000602088 MYH10P35580 1976 aa17.72■□□□□ 0.43
SSBP4-213ENST00000602088 C2orf78A6NCI8 922 aa17.72■□□□□ 0.43
SSBP4-213ENST00000602088 ZNF263O14978 683 aa17.72■□□□□ 0.43
SSBP4-213ENST00000602088 YWHAQP27348 245 aa17.72■□□□□ 0.43
SSBP4-213ENST00000602088 AVPR2P30518 371 aa17.72■□□□□ 0.43
SSBP4-213ENST00000602088 PPP3CCP48454 512 aa17.72■□□□□ 0.43
SSBP4-213ENST00000602088 CLCN5P51795 746 aa17.72■□□□□ 0.43
SSBP4-213ENST00000602088 SLC5A3P53794 718 aa17.72■□□□□ 0.43
SSBP4-213ENST00000602088 TAF10Q12962 218 aa17.72■□□□□ 0.43
SSBP4-213ENST00000602088 PPP1R26Q5T8A7 1209 aaPredicted RBP17.72■□□□□ 0.43
SSBP4-213ENST00000602088 ASTLQ6HA08 431 aaPredicted RBP17.72■□□□□ 0.43
SSBP4-213ENST00000602088 CLEC20AQ6ZU45 233 aa17.72■□□□□ 0.43
SSBP4-213ENST00000602088 CREBRFQ8IUR6 639 aa17.72■□□□□ 0.43
SSBP4-213ENST00000602088 FLCNQ8NFG4 579 aa17.72■□□□□ 0.43
SSBP4-213ENST00000602088 SCAMP5Q8TAC9 235 aa17.72■□□□□ 0.43
SSBP4-213ENST00000602088 DNASE1L2Q92874 299 aa17.72■□□□□ 0.43
SSBP4-213ENST00000602088 IRF7Q92985 503 aa17.72■□□□□ 0.43
SSBP4-213ENST00000602088 USP13Q92995 863 aaPredicted RBP17.72■□□□□ 0.43
SSBP4-213ENST00000602088 SLITRK1Q96PX8 696 aa17.72■□□□□ 0.43
SSBP4-213ENST00000602088 SLC22A12Q96S37 553 aa17.72■□□□□ 0.43
SSBP4-213ENST00000602088 CYP2S1Q96SQ9 504 aa17.72■□□□□ 0.43
SSBP4-213ENST00000602088 TRPC7Q9HCX4 862 aa17.72■□□□□ 0.43
SSBP4-213ENST00000602088 TRPV5Q9NQA5 729 aa17.72■□□□□ 0.43
SSBP4-213ENST00000602088 TDP1Q9NUW8 608 aa17.72■□□□□ 0.43
SSBP4-213ENST00000602088 COMMD8Q9NX08 183 aa17.72■□□□□ 0.43
SSBP4-213ENST00000602088 GCNT4Q9P109 453 aa17.72■□□□□ 0.43
SSBP4-213ENST00000602088 FAM92AA1XBS5 289 aa17.71■□□□□ 0.43
SSBP4-213ENST00000602088 ZNF840PA6NDX5 716 aa17.71■□□□□ 0.43
SSBP4-213ENST00000602088 CHADO15335 359 aa17.71■□□□□ 0.43
SSBP4-213ENST00000602088 ACO1P21399 889 aaKnown RBP17.71■□□□□ 0.43
SSBP4-213ENST00000602088 VCPP55072 806 aaKnown RBP17.71■□□□□ 0.43
SSBP4-213ENST00000602088 STARD6P59095 220 aa17.71■□□□□ 0.43
SSBP4-213ENST00000602088 GCNT1Q02742 428 aa17.71■□□□□ 0.43
SSBP4-213ENST00000602088 PRKCQQ04759 706 aa17.71■□□□□ 0.43
SSBP4-213ENST00000602088 IFRD2Q12894 506 aaPredicted RBP17.71■□□□□ 0.43
SSBP4-213ENST00000602088 ZNF268Q14587 947 aaPredicted RBP17.71■□□□□ 0.43
SSBP4-213ENST00000602088 CWF19L1Q69YN2 538 aaKnown RBP17.71■□□□□ 0.43
SSBP4-213ENST00000602088 PHLDB3Q6NSJ2 640 aa17.71■□□□□ 0.43
SSBP4-213ENST00000602088 YAF2Q8IY57 180 aa17.71■□□□□ 0.43
SSBP4-213ENST00000602088 PPM1KQ8N3J5 372 aa17.71■□□□□ 0.43
SSBP4-213ENST00000602088 BPIFB1Q8TDL5 484 aa17.71■□□□□ 0.43
SSBP4-213ENST00000602088 SHDQ96IW2 340 aa17.71■□□□□ 0.43
SSBP4-213ENST00000602088 RAPGEFL1Q9UHV5 662 aa17.71■□□□□ 0.43
SSBP4-213ENST00000602088 CCL26Q9Y258 94 aa17.71■□□□□ 0.43
SSBP4-213ENST00000602088 TRAV19A0A0A6YYK7 116 aa17.7■□□□□ 0.42
SSBP4-213ENST00000602088 HHLA1C9JL84 531 aa17.7■□□□□ 0.42
SSBP4-213ENST00000602088 ARNTLO00327 626 aa17.7■□□□□ 0.42
SSBP4-213ENST00000602088 PI15O43692 258 aa17.7■□□□□ 0.42
SSBP4-213ENST00000602088 USP17L7P0C7H9 530 aa17.7■□□□□ 0.42
SSBP4-213ENST00000602088 HDCP19113 662 aa17.7■□□□□ 0.42
SSBP4-213ENST00000602088 MTIF2P46199 727 aaKnown RBP17.7■□□□□ 0.42
SSBP4-213ENST00000602088 MLF2Q15773 248 aaPredicted RBP17.7■□□□□ 0.42
SSBP4-213ENST00000602088 CCDC183Q5T5S1 534 aa17.7■□□□□ 0.42
SSBP4-213ENST00000602088 ARHGAP17Q68EM7 881 aa17.7■□□□□ 0.42
SSBP4-213ENST00000602088 ARHGEF19Q8IW93 802 aa17.7■□□□□ 0.42
SSBP4-213ENST00000602088 FAM114A1Q8IWE2 563 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms