RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 LUZP1Q86V48 1076 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 TRIM59Q8IWR1 403 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 LRRC52Q8N7C0 313 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 TMEM102Q8N9M5 508 aaPredicted RBP6.86□□□□□ -1.31
VPS4B-205ENST00000591383 CCDC150Q8NCX0 1101 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 RNF214Q8ND24 703 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 ANKRD20A12PQ8NF67 263 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 SPPL3Q8TCT6 385 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 TAS1R2Q8TE23 839 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 TMEM174Q8WUU8 243 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 RIN2Q8WYP3 895 aaPredicted RBP6.86□□□□□ -1.31
VPS4B-205ENST00000591383 NKD1Q969G9 470 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 NXPE3Q969Y0 559 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 SLC35C1Q96A29 364 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 MRPL38Q96DV4 380 aaKnown RBP6.86□□□□□ -1.31
VPS4B-205ENST00000591383 HPDLQ96IR7 371 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 GUCD1Q96NT3 240 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 NSUN5Q96P11 429 aaKnown RBP6.86□□□□□ -1.31
VPS4B-205ENST00000591383 MED15Q96RN5 788 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 SLC30A3Q99726 388 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 PI4K2AQ9BTU6 479 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 TTPALQ9BTX7 342 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 FUCA2Q9BTY2 467 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 GPR62Q9BZJ7 368 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 BHLHE41Q9C0J9 482 aaPredicted RBP6.86□□□□□ -1.31
VPS4B-205ENST00000591383 NUCKS1Q9H1E3 243 aaKnown RBP6.86□□□□□ -1.31
VPS4B-205ENST00000591383 SMYD3Q9H7B4 428 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 CBX8Q9HC52 389 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 TMEM8AQ9HCN3 771 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 SAMSN1Q9NSI8 373 aaKnown RBP6.86□□□□□ -1.31
VPS4B-205ENST00000591383 NDFIP2Q9NV92 336 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 MARK1Q9P0L2 795 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 GCNT4Q9P109 453 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 SIRPGQ9P1W8 387 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 NXF1Q9UBU9 619 aaKnown RBP6.86□□□□□ -1.31
VPS4B-205ENST00000591383 TIMM13Q9Y5L4 95 aaPredicted RBP6.86□□□□□ -1.31
VPS4B-205ENST00000591383 SNX9Q9Y5X1 595 aa6.86□□□□□ -1.31
VPS4B-205ENST00000591383 ANO9A1A5B4 782 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 ARHGEF37A1IGU5 675 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 GOLGA6L19H0YKK7 550 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 CYB561D2O14569 222 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 HUS1O60921 280 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 PAGE1O75459 146 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 VNN1O95497 513 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 CPB1P15086 417 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 RPL17P18621 184 aaKnown RBP6.85□□□□□ -1.31
VPS4B-205ENST00000591383 EEF1GP26641 437 aaKnown RBP6.85□□□□□ -1.31
VPS4B-205ENST00000591383 RAP1GAPP47736 663 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 FMO5P49326 533 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 ARPP19P56211 112 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 LILRA4P59901 499 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 RAB33AQ14088 237 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 ADGRE1Q14246 886 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 ZBTB6Q15916 424 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 MAN2A1Q16706 1144 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 USP41Q3LFD5 358 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 ZACNQ401N2 412 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 CBWD6Q4V339 395 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 ZNF667Q5HYK9 610 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 CT47A1Q5JQC4 288 aaPredicted RBP6.85□□□□□ -1.31
VPS4B-205ENST00000591383 CBWD3Q5JTY5 395 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 CBWD5Q5RIA9 395 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 CDKAL1Q5VV42 579 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 KRT39Q6A163 491 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 SCARA3Q6AZY7 606 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 OVOS1Q6IE37 1185 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 SPOPLQ6IQ16 392 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 LLGL2Q6P1M3 1020 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 PRSS55Q6UWB4 352 aaPredicted RBP6.85□□□□□ -1.31
VPS4B-205ENST00000591383 LRSAM1Q6UWE0 723 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 EP400NLQ6ZTU2 488 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 SV2AQ7L0J3 742 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 TAS1R1Q7RTX1 841 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 RAB44Q7Z6P3 723 aaPredicted RBP6.85□□□□□ -1.31
VPS4B-205ENST00000591383 ADGRD2Q7Z7M1 963 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 DDX53Q86TM3 631 aaKnown RBP6.85□□□□□ -1.31
VPS4B-205ENST00000591383 METTL23Q86XA0 190 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 DHX40Q8IX18 779 aaKnown RBP6.85□□□□□ -1.31
VPS4B-205ENST00000591383 ADGRF2Q8IZF7 708 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 ENOX1Q8TC92 643 aaKnown RBP6.85□□□□□ -1.31
VPS4B-205ENST00000591383 CPLX3Q8WVH0 158 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 HNRNPLLQ8WVV9 542 aaKnown RBP6.85□□□□□ -1.31
VPS4B-205ENST00000591383 PPM1EQ8WY54 764 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 BHMTQ93088 406 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 PPP2R3CQ969Q6 453 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 SPACA7Q96KW9 195 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 SENP8Q96LD8 212 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 MMS19Q96T76 1030 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 CDX2Q99626 313 aaPredicted RBP6.85□□□□□ -1.31
VPS4B-205ENST00000591383 INTS2Q9H0H0 1204 aaKnown RBP6.85□□□□□ -1.31
VPS4B-205ENST00000591383 LMAN2LQ9H0V9 348 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 MRPL17Q9NRX2 175 aaKnown RBP6.85□□□□□ -1.31
VPS4B-205ENST00000591383 FANCLQ9NW38 375 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 STK39Q9UEW8 545 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 LZTS1Q9Y250 596 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 BRWD1Q9NSI6 2320 aa6.85□□□□□ -1.31
VPS4B-205ENST00000591383 PRUNE2Q8WUY3 3088 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 SMTNL1A8MU46 457 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 HIDE1A8MVS5 230 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 KPNA7A9QM74 516 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms