RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 HEXIM2Q96MH2 286 aaKnown RBP16.19■□□□□ 0.18
SMG6-220ENST00000576218 SLC46A2Q9BY10 475 aa16.19■□□□□ 0.18
SMG6-220ENST00000576218 KIF9Q9HAQ2 790 aa16.19■□□□□ 0.18
SMG6-220ENST00000576218 HEBP1Q9NRV9 189 aa16.19■□□□□ 0.18
SMG6-220ENST00000576218 RWDD2AQ9UIY3 292 aa16.19■□□□□ 0.18
SMG6-220ENST00000576218 CILPO75339 1184 aa16.18■□□□□ 0.18
SMG6-220ENST00000576218 USP17L7P0C7H9 530 aa16.18■□□□□ 0.18
SMG6-220ENST00000576218 YWHAQP27348 245 aa16.18■□□□□ 0.18
SMG6-220ENST00000576218 KPNA1P52294 538 aaPredicted RBP16.18■□□□□ 0.18
SMG6-220ENST00000576218 CACNA2D1P54289 1103 aa16.18■□□□□ 0.18
SMG6-220ENST00000576218 MAP3K7CLP57077 242 aa16.18■□□□□ 0.18
SMG6-220ENST00000576218 ARHGAP29Q52LW3 1261 aa16.18■□□□□ 0.18
SMG6-220ENST00000576218 CWF19L1Q69YN2 538 aaKnown RBP16.18■□□□□ 0.18
SMG6-220ENST00000576218 TMEM150AQ86TG1 271 aa16.18■□□□□ 0.18
SMG6-220ENST00000576218 MON1AQ86VX9 555 aa16.18■□□□□ 0.18
SMG6-220ENST00000576218 NUP93Q8N1F7 819 aa16.18■□□□□ 0.18
SMG6-220ENST00000576218 CRYBG2Q8N1P7 616 aa16.18■□□□□ 0.18
SMG6-220ENST00000576218 TMEM105Q8N8V8 129 aa16.18■□□□□ 0.18
SMG6-220ENST00000576218 C12orf29Q8N999 325 aa16.18■□□□□ 0.18
SMG6-220ENST00000576218 FAXDC2Q96IV6 333 aa16.18■□□□□ 0.18
SMG6-220ENST00000576218 NT5C1BQ96P26 610 aa16.18■□□□□ 0.18
SMG6-220ENST00000576218 KCNH6Q9H252 994 aa16.18■□□□□ 0.18
SMG6-220ENST00000576218 CISHQ9NSE2 258 aa16.18■□□□□ 0.18
SMG6-220ENST00000576218 LMBRD1Q9NUN5 540 aa16.18■□□□□ 0.18
SMG6-220ENST00000576218 TDP1Q9NUW8 608 aa16.18■□□□□ 0.18
SMG6-220ENST00000576218 OBP2AQ9NY56 170 aa16.18■□□□□ 0.18
SMG6-220ENST00000576218 MRPS17Q9Y2R5 130 aaKnown RBP16.18■□□□□ 0.18
SMG6-220ENST00000576218 SIT1Q9Y3P8 196 aa16.18■□□□□ 0.18
SMG6-220ENST00000576218 SOBPA7XYQ1 873 aa16.17■□□□□ 0.18
SMG6-220ENST00000576218 CHADO15335 359 aa16.17■□□□□ 0.18
SMG6-220ENST00000576218 LRRN2O75325 713 aa16.17■□□□□ 0.18
SMG6-220ENST00000576218 AFPP02771 609 aaKnown RBP16.17■□□□□ 0.18
SMG6-220ENST00000576218 TBXAS1P24557 533 aaPredicted RBP16.17■□□□□ 0.18
SMG6-220ENST00000576218 PPP3CCP48454 512 aa16.17■□□□□ 0.18
SMG6-220ENST00000576218 SLC5A3P53794 718 aa16.17■□□□□ 0.18
SMG6-220ENST00000576218 SLC8A3P57103 927 aa16.17■□□□□ 0.18
SMG6-220ENST00000576218 USP46P62068 366 aa16.17■□□□□ 0.18
SMG6-220ENST00000576218 PLCB2Q00722 1185 aa16.17■□□□□ 0.18
SMG6-220ENST00000576218 TAF10Q12962 218 aa16.17■□□□□ 0.18
SMG6-220ENST00000576218 CUL2Q13617 745 aa16.17■□□□□ 0.18
SMG6-220ENST00000576218 PHLDB3Q6NSJ2 640 aa16.17■□□□□ 0.18
SMG6-220ENST00000576218 ZNF852Q6ZMS4 543 aa16.17■□□□□ 0.18
SMG6-220ENST00000576218 FUKQ8N0W3 1084 aa16.17■□□□□ 0.18
SMG6-220ENST00000576218 PDZD8Q8NEN9 1154 aa16.17■□□□□ 0.18
SMG6-220ENST00000576218 TATDN2Q93075 761 aa16.17■□□□□ 0.18
SMG6-220ENST00000576218 FAM122AQ96E09 287 aa16.17■□□□□ 0.18
SMG6-220ENST00000576218 CYFIP2Q96F07 1278 aa16.17■□□□□ 0.18
SMG6-220ENST00000576218 CNOT6LQ96LI5 555 aaKnown RBP16.17■□□□□ 0.18
SMG6-220ENST00000576218 TWNKQ96RR1 684 aa16.17■□□□□ 0.18
SMG6-220ENST00000576218 KCNK16Q96T55 309 aa16.17■□□□□ 0.18
SMG6-220ENST00000576218 ARID3AQ99856 593 aa16.17■□□□□ 0.18
SMG6-220ENST00000576218 FOXQ1Q9C009 403 aa16.17■□□□□ 0.18
SMG6-220ENST00000576218 NACA2Q9H009 215 aa16.17■□□□□ 0.18
SMG6-220ENST00000576218 PIAS3Q9Y6X2 628 aa16.17■□□□□ 0.18
SMG6-220ENST00000576218 KANSL1LA0AUZ9 987 aa16.16■□□□□ 0.18
SMG6-220ENST00000576218 MAN2B1O00754 1011 aa16.16■□□□□ 0.18
SMG6-220ENST00000576218 TADA3O75528 432 aa16.16■□□□□ 0.18
SMG6-220ENST00000576218 CD19P15391 556 aa16.16■□□□□ 0.18
SMG6-220ENST00000576218 NPR3P17342 541 aa16.16■□□□□ 0.18
SMG6-220ENST00000576218 HDCP19113 662 aa16.16■□□□□ 0.18
SMG6-220ENST00000576218 WEE1P30291 646 aa16.16■□□□□ 0.18
SMG6-220ENST00000576218 MTIF2P46199 727 aaKnown RBP16.16■□□□□ 0.18
SMG6-220ENST00000576218 PTPN5P54829 565 aa16.16■□□□□ 0.18
SMG6-220ENST00000576218 IER5LQ5T953 404 aa16.16■□□□□ 0.18
SMG6-220ENST00000576218 FAM114A1Q8IWE2 563 aa16.16■□□□□ 0.18
SMG6-220ENST00000576218 PPM1KQ8N3J5 372 aa16.16■□□□□ 0.18
SMG6-220ENST00000576218 ARL14EPQ8N8R7 260 aaPredicted RBP16.16■□□□□ 0.18
SMG6-220ENST00000576218 TTC8Q8TAM2 541 aa16.16■□□□□ 0.18
SMG6-220ENST00000576218 RSPRY1Q96DX4 576 aa16.16■□□□□ 0.18
SMG6-220ENST00000576218 TMEM176AQ96HP8 235 aa16.16■□□□□ 0.18
SMG6-220ENST00000576218 ZFYVE19Q96K21 471 aa16.16■□□□□ 0.18
SMG6-220ENST00000576218 FBXO44Q9H4M3 255 aa16.16■□□□□ 0.18
SMG6-220ENST00000576218 COQ4Q9Y3A0 265 aa16.16■□□□□ 0.18
SMG6-220ENST00000576218 C2orf78A6NCI8 922 aa16.15■□□□□ 0.18
SMG6-220ENST00000576218 NCAM2O15394 837 aa16.15■□□□□ 0.18
SMG6-220ENST00000576218 P4HA2O15460 535 aa16.15■□□□□ 0.18
SMG6-220ENST00000576218 PI15O43692 258 aa16.15■□□□□ 0.18
SMG6-220ENST00000576218 DCNP07585 359 aaKnown RBP16.15■□□□□ 0.18
SMG6-220ENST00000576218 CD72P21854 359 aa16.15■□□□□ 0.18
SMG6-220ENST00000576218 NUBP1P53384 320 aa16.15■□□□□ 0.18
SMG6-220ENST00000576218 STARD6P59095 220 aa16.15■□□□□ 0.18
SMG6-220ENST00000576218 MCCD1P59942 119 aaPredicted RBP16.15■□□□□ 0.18
SMG6-220ENST00000576218 FCHO2Q0JRZ9 810 aa16.15■□□□□ 0.18
SMG6-220ENST00000576218 KCNH2Q12809 1159 aa16.15■□□□□ 0.18
SMG6-220ENST00000576218 PJA1Q8NG27 643 aa16.15■□□□□ 0.18
SMG6-220ENST00000576218 NUP210Q8TEM1 1887 aaPredicted RBP16.15■□□□□ 0.18
SMG6-220ENST00000576218 USP13Q92995 863 aaPredicted RBP16.15■□□□□ 0.18
SMG6-220ENST00000576218 CYP2S1Q96SQ9 504 aa16.15■□□□□ 0.18
SMG6-220ENST00000576218 HNRNPABQ99729 332 aaKnown RBP16.15■□□□□ 0.18
SMG6-220ENST00000576218 TTLL2Q9BWV7 592 aa16.15■□□□□ 0.18
SMG6-220ENST00000576218 FAM124BQ9H5Z6 455 aaPredicted RBP16.15■□□□□ 0.18
SMG6-220ENST00000576218 NDRG2Q9UN36 371 aaKnown RBP16.15■□□□□ 0.18
SMG6-220ENST00000576218 CCL26Q9Y258 94 aa16.15■□□□□ 0.18
SMG6-220ENST00000576218 PTPRDP23468 1912 aa16.15■□□□□ 0.18
SMG6-220ENST00000576218 NCANO14594 1321 aa16.15■□□□□ 0.18
SMG6-220ENST00000576218 FAM170BA6NMN3 283 aa16.14■□□□□ 0.17
SMG6-220ENST00000576218 PES1O00541 588 aaKnown RBP16.14■□□□□ 0.17
SMG6-220ENST00000576218 GALR2O43603 387 aaPredicted RBP16.14■□□□□ 0.17
SMG6-220ENST00000576218 MBD3O95983 291 aa16.14■□□□□ 0.17
SMG6-220ENST00000576218 IFNAR2P48551 515 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms