RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 SLC38A8A6NNN8 435 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 F8VP50 259 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 PSMA7O14818 248 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 CETN3O15182 167 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 PDGFRBP09619 1106 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 C7P10643 843 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 EPB41P11171 864 aaKnown RBP9.25□□□□□ -0.93
SMG6-210ENST00000572205 MYL4P12829 197 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 CCDC130P13994 396 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 PTPN1P18031 435 aaKnown RBP9.25□□□□□ -0.93
SMG6-210ENST00000572205 ACO1P21399 889 aaKnown RBP9.25□□□□□ -0.93
SMG6-210ENST00000572205 RFX1P22670 979 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 BDNFP23560 247 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 GABRR2P28476 465 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 VIPR2P41587 438 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 TUFMP49411 452 aaKnown RBP9.25□□□□□ -0.93
SMG6-210ENST00000572205 NDST1P52848 882 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 STX17P56962 302 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 TNNC1P63316 161 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 GPC5P78333 572 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 FCHO2Q0JRZ9 810 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 USP4Q13107 963 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 PAK1Q13153 545 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 SGSM1Q2NKQ1 1148 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 KRT39Q6A163 491 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 KLHL10Q6JEL2 608 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 GPRIN1Q7Z2K8 1008 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 FILIP1Q7Z7B0 1213 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 CRYBG2Q8N1P7 616 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 FBXL13Q8NEE6 735 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 PRSS33Q8NF86 280 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 ZSCAN18Q8TBC5 510 aaPredicted RBP9.25□□□□□ -0.93
SMG6-210ENST00000572205 SMARCD2Q92925 531 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 KAT5Q92993 513 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 TATDN2Q93075 761 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 C8orf48Q96LL4 319 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 MMS19Q96T76 1030 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 SMOQ99835 787 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 ZSWIM1Q9BR11 485 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 SLC46A2Q9BY10 475 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 GTPBP4Q9BZE4 634 aaKnown RBP9.25□□□□□ -0.93
SMG6-210ENST00000572205 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.25□□□□□ -0.93
SMG6-210ENST00000572205 GCNT4Q9P109 453 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 CCL26Q9Y258 94 aa9.25□□□□□ -0.93
SMG6-210ENST00000572205 NYNRINQ9P2P1 1898 aaKnown RBP9.24□□□□□ -0.93
SMG6-210ENST00000572205 PI15O43692 258 aa9.24□□□□□ -0.93
SMG6-210ENST00000572205 GLULP15104 373 aa9.24□□□□□ -0.93
SMG6-210ENST00000572205 GNL1P36915 607 aaPredicted RBP9.24□□□□□ -0.93
SMG6-210ENST00000572205 ALDH1A3P47895 512 aa9.24□□□□□ -0.93
SMG6-210ENST00000572205 FMO5P49326 533 aa9.24□□□□□ -0.93
SMG6-210ENST00000572205 ZNF132P52740 706 aa9.24□□□□□ -0.93
SMG6-210ENST00000572205 EPHB3P54753 998 aa9.24□□□□□ -0.93
SMG6-210ENST00000572205 FZD5Q13467 585 aa9.24□□□□□ -0.93
SMG6-210ENST00000572205 TRPC3Q13507 836 aa9.24□□□□□ -0.93
SMG6-210ENST00000572205 VSTM1Q6UX27 236 aa9.24□□□□□ -0.93
SMG6-210ENST00000572205 CLEC20AQ6ZU45 233 aa9.24□□□□□ -0.93
SMG6-210ENST00000572205 NUDT18Q6ZVK8 323 aa9.24□□□□□ -0.93
SMG6-210ENST00000572205 MTSS1LQ765P7 747 aa9.24□□□□□ -0.93
SMG6-210ENST00000572205 BHLHA9Q7RTU4 235 aa9.24□□□□□ -0.93
SMG6-210ENST00000572205 FRMD5Q7Z6J6 570 aa9.24□□□□□ -0.93
SMG6-210ENST00000572205 ACOT1Q86TX2 421 aa9.24□□□□□ -0.93
SMG6-210ENST00000572205 FBXL6Q8N531 539 aa9.24□□□□□ -0.93
SMG6-210ENST00000572205 C12orf29Q8N999 325 aa9.24□□□□□ -0.93
SMG6-210ENST00000572205 SLC4A11Q8NBS3 891 aa9.24□□□□□ -0.93
SMG6-210ENST00000572205 OR6B3Q8NGW1 331 aa9.24□□□□□ -0.93
SMG6-210ENST00000572205 CCDC34Q96HJ3 373 aa9.24□□□□□ -0.93
SMG6-210ENST00000572205 FAXDC2Q96IV6 333 aa9.24□□□□□ -0.93
SMG6-210ENST00000572205 ZFRQ96KR1 1074 aaKnown RBP9.24□□□□□ -0.93
SMG6-210ENST00000572205 CEP295NLQ96MC4 621 aa9.24□□□□□ -0.93
SMG6-210ENST00000572205 ZNF512Q96ME7 567 aaPredicted RBP9.24□□□□□ -0.93
SMG6-210ENST00000572205 DCBLD2Q96PD2 775 aa9.24□□□□□ -0.93
SMG6-210ENST00000572205 KCNK16Q96T55 309 aa9.24□□□□□ -0.93
SMG6-210ENST00000572205 SMG9Q9H0W8 520 aaKnown RBP9.24□□□□□ -0.93
SMG6-210ENST00000572205 HSD3B7Q9H2F3 369 aa9.24□□□□□ -0.93
SMG6-210ENST00000572205 MMRN2Q9H8L6 949 aa9.24□□□□□ -0.93
SMG6-210ENST00000572205 RAB20Q9NX57 234 aa9.24□□□□□ -0.93
SMG6-210ENST00000572205 WNT16Q9UBV4 365 aa9.24□□□□□ -0.93
SMG6-210ENST00000572205 ARMCX3Q9UH62 379 aaPredicted RBP9.24□□□□□ -0.93
SMG6-210ENST00000572205 RWDD2AQ9UIY3 292 aa9.24□□□□□ -0.93
SMG6-210ENST00000572205 HOOK1Q9UJC3 728 aaKnown RBP9.24□□□□□ -0.93
SMG6-210ENST00000572205 AJAP1Q9UKB5 411 aaPredicted RBP9.24□□□□□ -0.93
SMG6-210ENST00000572205 C2orf78A6NCI8 922 aa9.23□□□□□ -0.93
SMG6-210ENST00000572205 OTOL1A6NHN0 477 aaPredicted RBP9.23□□□□□ -0.93
SMG6-210ENST00000572205 A8MXQ7 604 aa9.23□□□□□ -0.93
SMG6-210ENST00000572205 ZNF197O14709 1029 aa9.23□□□□□ -0.93
SMG6-210ENST00000572205 PHACTR2O75167 634 aa9.23□□□□□ -0.93
SMG6-210ENST00000572205 OAS1P00973 400 aaKnown RBP9.23□□□□□ -0.93
SMG6-210ENST00000572205 CFHP08603 1231 aa9.23□□□□□ -0.93
SMG6-210ENST00000572205 ZDHHC11BP0C7U3 371 aa9.23□□□□□ -0.93
SMG6-210ENST00000572205 CSH1P0DML2 217 aa9.23□□□□□ -0.93
SMG6-210ENST00000572205 CSH2P0DML3 217 aa9.23□□□□□ -0.93
SMG6-210ENST00000572205 KRT13P13646 458 aa9.23□□□□□ -0.93
SMG6-210ENST00000572205 PPP1R2P41236 205 aa9.23□□□□□ -0.93
SMG6-210ENST00000572205 RAD23BP54727 409 aa9.23□□□□□ -0.93
SMG6-210ENST00000572205 TCF15Q12870 199 aa9.23□□□□□ -0.93
SMG6-210ENST00000572205 GRM2Q14416 872 aa9.23□□□□□ -0.93
SMG6-210ENST00000572205 ZNF77Q15935 545 aa9.23□□□□□ -0.93
SMG6-210ENST00000572205 DCAF17Q5H9S7 520 aaPredicted RBP9.23□□□□□ -0.93
SMG6-210ENST00000572205 MIIPQ5JXC2 388 aa9.23□□□□□ -0.93
SMG6-210ENST00000572205 TXNDC8Q6A555 127 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms