RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 KIAA1468Q9P260 1216 aa13.86□□□□□ -0.19
CNOT1-220ENST00000569916 ARMCX3Q9UH62 379 aaPredicted RBP13.86□□□□□ -0.19
CNOT1-220ENST00000569916 ATP8B3O60423 1300 aa13.86□□□□□ -0.19
CNOT1-220ENST00000569916 KANSL1LA0AUZ9 987 aa13.85□□□□□ -0.19
CNOT1-220ENST00000569916 BICDL2A1A5D9 508 aa13.85□□□□□ -0.19
CNOT1-220ENST00000569916 DPYSL4O14531 572 aa13.85□□□□□ -0.19
CNOT1-220ENST00000569916 ZNF263O14978 683 aa13.85□□□□□ -0.19
CNOT1-220ENST00000569916 CHADO15335 359 aa13.85□□□□□ -0.19
CNOT1-220ENST00000569916 CILPO75339 1184 aa13.85□□□□□ -0.19
CNOT1-220ENST00000569916 CCDC130P13994 396 aa13.85□□□□□ -0.19
CNOT1-220ENST00000569916 AVPR1AP37288 418 aa13.85□□□□□ -0.19
CNOT1-220ENST00000569916 PTPN5P54829 565 aa13.85□□□□□ -0.19
CNOT1-220ENST00000569916 FILIP1Q7Z7B0 1213 aa13.85□□□□□ -0.19
CNOT1-220ENST00000569916 YAF2Q8IY57 180 aa13.85□□□□□ -0.19
CNOT1-220ENST00000569916 CELF5Q8N6W0 485 aaKnown RBP13.85□□□□□ -0.19
CNOT1-220ENST00000569916 CCDC150Q8NCX0 1101 aa13.85□□□□□ -0.19
CNOT1-220ENST00000569916 BPIFB1Q8TDL5 484 aa13.85□□□□□ -0.19
CNOT1-220ENST00000569916 WHAMMQ8TF30 809 aa13.85□□□□□ -0.19
CNOT1-220ENST00000569916 USP13Q92995 863 aaPredicted RBP13.85□□□□□ -0.19
CNOT1-220ENST00000569916 SMARCD1Q96GM5 515 aa13.85□□□□□ -0.19
CNOT1-220ENST00000569916 METTL14Q9HCE5 456 aaKnown RBP13.85□□□□□ -0.19
CNOT1-220ENST00000569916 LTB4R2Q9NPC1 389 aa13.85□□□□□ -0.19
CNOT1-220ENST00000569916 FAM49BQ9NUQ9 324 aa13.85□□□□□ -0.19
CNOT1-220ENST00000569916 RAB20Q9NX57 234 aa13.85□□□□□ -0.19
CNOT1-220ENST00000569916 DLGAP2Q9P1A6 1054 aa13.85□□□□□ -0.19
CNOT1-220ENST00000569916 CCL26Q9Y258 94 aa13.85□□□□□ -0.19
CNOT1-220ENST00000569916 COQ4Q9Y3A0 265 aa13.85□□□□□ -0.19
CNOT1-220ENST00000569916 SIT1Q9Y3P8 196 aa13.85□□□□□ -0.19
CNOT1-220ENST00000569916 C2orf78A6NCI8 922 aa13.84□□□□□ -0.19
CNOT1-220ENST00000569916 DCNP07585 359 aaKnown RBP13.84□□□□□ -0.19
CNOT1-220ENST00000569916 CD58P19256 250 aa13.84□□□□□ -0.19
CNOT1-220ENST00000569916 CD72P21854 359 aa13.84□□□□□ -0.19
CNOT1-220ENST00000569916 STX17P56962 302 aa13.84□□□□□ -0.19
CNOT1-220ENST00000569916 PAK1Q13153 545 aa13.84□□□□□ -0.19
CNOT1-220ENST00000569916 ARHGAP29Q52LW3 1261 aa13.84□□□□□ -0.19
CNOT1-220ENST00000569916 FRMD5Q7Z6J6 570 aa13.84□□□□□ -0.19
CNOT1-220ENST00000569916 C12orf29Q8N999 325 aa13.84□□□□□ -0.19
CNOT1-220ENST00000569916 DTWD2Q8NBA8 298 aa13.84□□□□□ -0.19
CNOT1-220ENST00000569916 ZMIZ2Q8NF64 920 aa13.84□□□□□ -0.19
CNOT1-220ENST00000569916 RIN3Q8TB24 985 aa13.84□□□□□ -0.19
CNOT1-220ENST00000569916 SLC2A14Q8TDB8 520 aa13.84□□□□□ -0.19
CNOT1-220ENST00000569916 FAXDC2Q96IV6 333 aa13.84□□□□□ -0.19
CNOT1-220ENST00000569916 ZFYVE19Q96K21 471 aa13.84□□□□□ -0.19
CNOT1-220ENST00000569916 SLC22A12Q96S37 553 aa13.84□□□□□ -0.19
CNOT1-220ENST00000569916 KCNK16Q96T55 309 aa13.84□□□□□ -0.19
CNOT1-220ENST00000569916 ARID3AQ99856 593 aa13.84□□□□□ -0.19
CNOT1-220ENST00000569916 MED10Q9BTT4 135 aa13.84□□□□□ -0.19
CNOT1-220ENST00000569916 KIF9Q9HAQ2 790 aa13.84□□□□□ -0.19
CNOT1-220ENST00000569916 TRPC7Q9HCX4 862 aa13.84□□□□□ -0.19
CNOT1-220ENST00000569916 DMAP1Q9NPF5 467 aaPredicted RBP13.84□□□□□ -0.19
CNOT1-220ENST00000569916 KRT82Q9NSB4 513 aa13.84□□□□□ -0.19
CNOT1-220ENST00000569916 TDP1Q9NUW8 608 aa13.84□□□□□ -0.19
CNOT1-220ENST00000569916 EHD2Q9NZN4 543 aa13.84□□□□□ -0.19
CNOT1-220ENST00000569916 GCNT4Q9P109 453 aa13.84□□□□□ -0.19
CNOT1-220ENST00000569916 MTF2Q9Y483 593 aaPredicted RBP13.84□□□□□ -0.19
CNOT1-220ENST00000569916 TRAV19A0A0A6YYK7 116 aa13.83□□□□□ -0.2
CNOT1-220ENST00000569916 TNFRSF10BO14763 440 aa13.83□□□□□ -0.2
CNOT1-220ENST00000569916 AP1G2O75843 785 aa13.83□□□□□ -0.2
CNOT1-220ENST00000569916 GLULP15104 373 aa13.83□□□□□ -0.2
CNOT1-220ENST00000569916 TARSP26639 723 aaKnown RBP13.83□□□□□ -0.2
CNOT1-220ENST00000569916 ZNF268Q14587 947 aaPredicted RBP13.83□□□□□ -0.2
CNOT1-220ENST00000569916 UBXN2BQ14CS0 331 aa13.83□□□□□ -0.2
CNOT1-220ENST00000569916 CCDC40Q4G0X9 1142 aa13.83□□□□□ -0.2
CNOT1-220ENST00000569916 TATDN2Q93075 761 aa13.83□□□□□ -0.2
CNOT1-220ENST00000569916 CYP2S1Q96SQ9 504 aa13.83□□□□□ -0.2
CNOT1-220ENST00000569916 SMOQ99835 787 aa13.83□□□□□ -0.2
CNOT1-220ENST00000569916 NT5C1AQ9BXI3 368 aa13.83□□□□□ -0.2
CNOT1-220ENST00000569916 OSBPL6Q9BZF3 934 aa13.83□□□□□ -0.2
CNOT1-220ENST00000569916 CLSTN2Q9H4D0 955 aa13.83□□□□□ -0.2
CNOT1-220ENST00000569916 CSNK1G1Q9HCP0 422 aa13.83□□□□□ -0.2
CNOT1-220ENST00000569916 TRPM5Q9NZQ8 1165 aa13.83□□□□□ -0.2
CNOT1-220ENST00000569916 PIAS3Q9Y6X2 628 aa13.83□□□□□ -0.2
CNOT1-220ENST00000569916 ZNF840PA6NDX5 716 aa13.82□□□□□ -0.2
CNOT1-220ENST00000569916 H0Y858 1186 aa13.82□□□□□ -0.2
CNOT1-220ENST00000569916 BEST1O76090 585 aa13.82□□□□□ -0.2
CNOT1-220ENST00000569916 CKMP06732 381 aa13.82□□□□□ -0.2
CNOT1-220ENST00000569916 USP17L7P0C7H9 530 aa13.82□□□□□ -0.2
CNOT1-220ENST00000569916 ADORA2BP29275 332 aa13.82□□□□□ -0.2
CNOT1-220ENST00000569916 FMO5P49326 533 aa13.82□□□□□ -0.2
CNOT1-220ENST00000569916 SLC5A3P53794 718 aa13.82□□□□□ -0.2
CNOT1-220ENST00000569916 PLCB2Q00722 1185 aa13.82□□□□□ -0.2
CNOT1-220ENST00000569916 IFRD2Q12894 506 aaPredicted RBP13.82□□□□□ -0.2
CNOT1-220ENST00000569916 TAF10Q12962 218 aa13.82□□□□□ -0.2
CNOT1-220ENST00000569916 USP4Q13107 963 aa13.82□□□□□ -0.2
CNOT1-220ENST00000569916 WDR44Q5JSH3 913 aa13.82□□□□□ -0.2
CNOT1-220ENST00000569916 ZNF852Q6ZMS4 543 aa13.82□□□□□ -0.2
CNOT1-220ENST00000569916 NUP93Q8N1F7 819 aa13.82□□□□□ -0.2
CNOT1-220ENST00000569916 ARL14EPQ8N8R7 260 aaPredicted RBP13.82□□□□□ -0.2
CNOT1-220ENST00000569916 CSGALNACT1Q8TDX6 532 aa13.82□□□□□ -0.2
CNOT1-220ENST00000569916 HNRNPABQ99729 332 aaKnown RBP13.82□□□□□ -0.2
CNOT1-220ENST00000569916 CISHQ9NSE2 258 aa13.82□□□□□ -0.2
CNOT1-220ENST00000569916 FAM170BA6NMN3 283 aa13.81□□□□□ -0.2
CNOT1-220ENST00000569916 MAN2B1O00754 1011 aa13.81□□□□□ -0.2
CNOT1-220ENST00000569916 PMM2O15305 246 aa13.81□□□□□ -0.2
CNOT1-220ENST00000569916 RTN3O95197 1032 aaPredicted RBP13.81□□□□□ -0.2
CNOT1-220ENST00000569916 OLFM2O95897 454 aa13.81□□□□□ -0.2
CNOT1-220ENST00000569916 FAM200BP0CF97 657 aa13.81□□□□□ -0.2
CNOT1-220ENST00000569916 PFKLP17858 780 aa13.81□□□□□ -0.2
CNOT1-220ENST00000569916 TRIM21P19474 475 aaKnown RBP13.81□□□□□ -0.2
CNOT1-220ENST00000569916 YWHAQP27348 245 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms