RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 USP46P62068 366 aa14.66□□□□□ -0.06
HERPUD1-218ENST00000569569 CUL2Q13617 745 aa14.66□□□□□ -0.06
HERPUD1-218ENST00000569569 GRM2Q14416 872 aa14.66□□□□□ -0.06
HERPUD1-218ENST00000569569 TPD52L1Q16890 204 aaPredicted RBP14.66□□□□□ -0.06
HERPUD1-218ENST00000569569 SLC44A4Q53GD3 710 aa14.66□□□□□ -0.06
HERPUD1-218ENST00000569569 CT47A1Q5JQC4 288 aaPredicted RBP14.66□□□□□ -0.06
HERPUD1-218ENST00000569569 TXNDC8Q6A555 127 aa14.66□□□□□ -0.06
HERPUD1-218ENST00000569569 MON1AQ86VX9 555 aa14.66□□□□□ -0.06
HERPUD1-218ENST00000569569 CREBRFQ8IUR6 639 aa14.66□□□□□ -0.06
HERPUD1-218ENST00000569569 GPIHBP1Q8IV16 184 aa14.66□□□□□ -0.06
HERPUD1-218ENST00000569569 NUP93Q8N1F7 819 aa14.66□□□□□ -0.06
HERPUD1-218ENST00000569569 SLC2A14Q8TDB8 520 aa14.66□□□□□ -0.06
HERPUD1-218ENST00000569569 IRF7Q92985 503 aa14.66□□□□□ -0.06
HERPUD1-218ENST00000569569 CYFIP2Q96F07 1278 aa14.66□□□□□ -0.06
HERPUD1-218ENST00000569569 KCNK16Q96T55 309 aa14.66□□□□□ -0.06
HERPUD1-218ENST00000569569 HNRNPABQ99729 332 aaKnown RBP14.66□□□□□ -0.06
HERPUD1-218ENST00000569569 TTLL2Q9BWV7 592 aa14.66□□□□□ -0.06
HERPUD1-218ENST00000569569 BRD9Q9H8M2 597 aa14.66□□□□□ -0.06
HERPUD1-218ENST00000569569 DMAP1Q9NPF5 467 aaPredicted RBP14.66□□□□□ -0.06
HERPUD1-218ENST00000569569 ARHGEF3Q9NR81 526 aa14.66□□□□□ -0.06
HERPUD1-218ENST00000569569 FAM49BQ9NUQ9 324 aa14.66□□□□□ -0.06
HERPUD1-218ENST00000569569 STK25O00506 426 aa14.65□□□□□ -0.06
HERPUD1-218ENST00000569569 RTN3O95197 1032 aaPredicted RBP14.65□□□□□ -0.06
HERPUD1-218ENST00000569569 MBD3O95983 291 aa14.65□□□□□ -0.06
HERPUD1-218ENST00000569569 AFPP02771 609 aaKnown RBP14.65□□□□□ -0.06
HERPUD1-218ENST00000569569 NPR3P17342 541 aa14.65□□□□□ -0.06
HERPUD1-218ENST00000569569 TBXAS1P24557 533 aaPredicted RBP14.65□□□□□ -0.06
HERPUD1-218ENST00000569569 AVPR2P30518 371 aa14.65□□□□□ -0.06
HERPUD1-218ENST00000569569 GDI1P31150 447 aa14.65□□□□□ -0.06
HERPUD1-218ENST00000569569 CLCN5P51795 746 aa14.65□□□□□ -0.06
HERPUD1-218ENST00000569569 YWHAEP62258 255 aaKnown RBP14.65□□□□□ -0.06
HERPUD1-218ENST00000569569 DPCR1Q3MIW9 517 aa14.65□□□□□ -0.06
HERPUD1-218ENST00000569569 ZNF394Q53GI3 561 aa14.65□□□□□ -0.06
HERPUD1-218ENST00000569569 ASTLQ6HA08 431 aaPredicted RBP14.65□□□□□ -0.06
HERPUD1-218ENST00000569569 YAF2Q8IY57 180 aa14.65□□□□□ -0.06
HERPUD1-218ENST00000569569 CELF5Q8N6W0 485 aaKnown RBP14.65□□□□□ -0.06
HERPUD1-218ENST00000569569 EHBP1Q8NDI1 1231 aa14.65□□□□□ -0.06
HERPUD1-218ENST00000569569 FLCNQ8NFG4 579 aa14.65□□□□□ -0.06
HERPUD1-218ENST00000569569 DNASE1L2Q92874 299 aa14.65□□□□□ -0.06
HERPUD1-218ENST00000569569 RSPRY1Q96DX4 576 aa14.65□□□□□ -0.06
HERPUD1-218ENST00000569569 TMEM176AQ96HP8 235 aa14.65□□□□□ -0.06
HERPUD1-218ENST00000569569 SHDQ96IW2 340 aa14.65□□□□□ -0.06
HERPUD1-218ENST00000569569 CNOT6LQ96LI5 555 aaKnown RBP14.65□□□□□ -0.06
HERPUD1-218ENST00000569569 HEXIM2Q96MH2 286 aaKnown RBP14.65□□□□□ -0.06
HERPUD1-218ENST00000569569 NT5C1BQ96P26 610 aa14.65□□□□□ -0.06
HERPUD1-218ENST00000569569 SLITRK1Q96PX8 696 aa14.65□□□□□ -0.06
HERPUD1-218ENST00000569569 ARID3AQ99856 593 aa14.65□□□□□ -0.06
HERPUD1-218ENST00000569569 CSNK1G1Q9HCP0 422 aa14.65□□□□□ -0.06
HERPUD1-218ENST00000569569 TRPV5Q9NQA5 729 aa14.65□□□□□ -0.06
HERPUD1-218ENST00000569569 KRT82Q9NSB4 513 aa14.65□□□□□ -0.06
HERPUD1-218ENST00000569569 COMMD8Q9NX08 183 aa14.65□□□□□ -0.06
HERPUD1-218ENST00000569569 TRPM5Q9NZQ8 1165 aa14.65□□□□□ -0.06
HERPUD1-218ENST00000569569 TNFRSF10BO14763 440 aa14.64□□□□□ -0.07
HERPUD1-218ENST00000569569 ZNF263O14978 683 aa14.64□□□□□ -0.07
HERPUD1-218ENST00000569569 CHADO15335 359 aa14.64□□□□□ -0.07
HERPUD1-218ENST00000569569 PRAMEF12O95522 483 aa14.64□□□□□ -0.07
HERPUD1-218ENST00000569569 FAM200BP0CF97 657 aa14.64□□□□□ -0.07
HERPUD1-218ENST00000569569 PFKLP17858 780 aa14.64□□□□□ -0.07
HERPUD1-218ENST00000569569 RFX1P22670 979 aa14.64□□□□□ -0.07
HERPUD1-218ENST00000569569 YWHAQP27348 245 aa14.64□□□□□ -0.07
HERPUD1-218ENST00000569569 ADORA2BP29275 332 aa14.64□□□□□ -0.07
HERPUD1-218ENST00000569569 RAD23BP54727 409 aa14.64□□□□□ -0.07
HERPUD1-218ENST00000569569 STARD6P59095 220 aa14.64□□□□□ -0.07
HERPUD1-218ENST00000569569 PRKCQQ04759 706 aa14.64□□□□□ -0.07
HERPUD1-218ENST00000569569 FCHO2Q0JRZ9 810 aa14.64□□□□□ -0.07
HERPUD1-218ENST00000569569 LRMPQ12912 555 aa14.64□□□□□ -0.07
HERPUD1-218ENST00000569569 TAF10Q12962 218 aa14.64□□□□□ -0.07
HERPUD1-218ENST00000569569 MLF2Q15773 248 aaPredicted RBP14.64□□□□□ -0.07
HERPUD1-218ENST00000569569 IER5LQ5T953 404 aa14.64□□□□□ -0.07
HERPUD1-218ENST00000569569 PHLDB3Q6NSJ2 640 aa14.64□□□□□ -0.07
HERPUD1-218ENST00000569569 RBM43Q6ZSC3 357 aaKnown RBP14.64□□□□□ -0.07
HERPUD1-218ENST00000569569 SLC4A11Q8NBS3 891 aa14.64□□□□□ -0.07
HERPUD1-218ENST00000569569 ZMIZ2Q8NF64 920 aa14.64□□□□□ -0.07
HERPUD1-218ENST00000569569 LMO3Q8TAP4 145 aa14.64□□□□□ -0.07
HERPUD1-218ENST00000569569 BPIFB1Q8TDL5 484 aa14.64□□□□□ -0.07
HERPUD1-218ENST00000569569 SMOQ99835 787 aa14.64□□□□□ -0.07
HERPUD1-218ENST00000569569 KCNH6Q9H252 994 aa14.64□□□□□ -0.07
HERPUD1-218ENST00000569569 KIF9Q9HAQ2 790 aa14.64□□□□□ -0.07
HERPUD1-218ENST00000569569 TDP1Q9NUW8 608 aa14.64□□□□□ -0.07
HERPUD1-218ENST00000569569 NCANO14594 1321 aa14.64□□□□□ -0.07
HERPUD1-218ENST00000569569 COL4A2P08572 1712 aa14.63□□□□□ -0.07
HERPUD1-218ENST00000569569 TRAV19A0A0A6YYK7 116 aa14.63□□□□□ -0.07
HERPUD1-218ENST00000569569 BEST1O76090 585 aa14.63□□□□□ -0.07
HERPUD1-218ENST00000569569 USP17L7P0C7H9 530 aa14.63□□□□□ -0.07
HERPUD1-218ENST00000569569 AOC1P19801 751 aa14.63□□□□□ -0.07
HERPUD1-218ENST00000569569 PDE6CP51160 858 aa14.63□□□□□ -0.07
HERPUD1-218ENST00000569569 SLC5A3P53794 718 aa14.63□□□□□ -0.07
HERPUD1-218ENST00000569569 VCPP55072 806 aaKnown RBP14.63□□□□□ -0.07
HERPUD1-218ENST00000569569 MAP3K7CLP57077 242 aa14.63□□□□□ -0.07
HERPUD1-218ENST00000569569 IFRD2Q12894 506 aaPredicted RBP14.63□□□□□ -0.07
HERPUD1-218ENST00000569569 ZNF268Q14587 947 aaPredicted RBP14.63□□□□□ -0.07
HERPUD1-218ENST00000569569 ARHGAP29Q52LW3 1261 aa14.63□□□□□ -0.07
HERPUD1-218ENST00000569569 PPP1R26Q5T8A7 1209 aaPredicted RBP14.63□□□□□ -0.07
HERPUD1-218ENST00000569569 CWF19L1Q69YN2 538 aaKnown RBP14.63□□□□□ -0.07
HERPUD1-218ENST00000569569 IRF2BP1Q8IU81 584 aa14.63□□□□□ -0.07
HERPUD1-218ENST00000569569 FAM114A1Q8IWE2 563 aa14.63□□□□□ -0.07
HERPUD1-218ENST00000569569 OVCA2Q8WZ82 227 aa14.63□□□□□ -0.07
HERPUD1-218ENST00000569569 USP13Q92995 863 aaPredicted RBP14.63□□□□□ -0.07
HERPUD1-218ENST00000569569 LRRC3BQ96PB8 259 aa14.63□□□□□ -0.07
HERPUD1-218ENST00000569569 SMG9Q9H0W8 520 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms