RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 KCNK16Q96T55 309 aa19.85■□□□□ 0.77
CMTM3-210ENST00000565666 TMEM30AQ9NV96 361 aa19.85■□□□□ 0.77
CMTM3-210ENST00000565666 ZNF638Q14966 1978 aaKnown RBP19.84■□□□□ 0.77
CMTM3-210ENST00000565666 ZNF263O14978 683 aa19.84■□□□□ 0.77
CMTM3-210ENST00000565666 PMM2O15305 246 aa19.84■□□□□ 0.77
CMTM3-210ENST00000565666 RTN3O95197 1032 aaPredicted RBP19.84■□□□□ 0.77
CMTM3-210ENST00000565666 MBD3O95983 291 aa19.84■□□□□ 0.77
CMTM3-210ENST00000565666 FAM200BP0CF97 657 aa19.84■□□□□ 0.77
CMTM3-210ENST00000565666 TBXAS1P24557 533 aaPredicted RBP19.84■□□□□ 0.77
CMTM3-210ENST00000565666 WEE1P30291 646 aa19.84■□□□□ 0.77
CMTM3-210ENST00000565666 MON1AQ86VX9 555 aa19.84■□□□□ 0.77
CMTM3-210ENST00000565666 NUP93Q8N1F7 819 aa19.84■□□□□ 0.77
CMTM3-210ENST00000565666 IRF7Q92985 503 aa19.84■□□□□ 0.77
CMTM3-210ENST00000565666 RSPRY1Q96DX4 576 aa19.84■□□□□ 0.77
CMTM3-210ENST00000565666 CYFIP2Q96F07 1278 aa19.84■□□□□ 0.77
CMTM3-210ENST00000565666 HEXIM2Q96MH2 286 aaKnown RBP19.84■□□□□ 0.77
CMTM3-210ENST00000565666 SLITRK1Q96PX8 696 aa19.84■□□□□ 0.77
CMTM3-210ENST00000565666 TTLL2Q9BWV7 592 aa19.84■□□□□ 0.77
CMTM3-210ENST00000565666 SMG9Q9H0W8 520 aaKnown RBP19.84■□□□□ 0.77
CMTM3-210ENST00000565666 FAM124BQ9H5Z6 455 aaPredicted RBP19.84■□□□□ 0.77
CMTM3-210ENST00000565666 OBP2AQ9NY56 170 aa19.84■□□□□ 0.77
CMTM3-210ENST00000565666 TRPM5Q9NZQ8 1165 aa19.84■□□□□ 0.77
CMTM3-210ENST00000565666 KMT2EQ8IZD2 1858 aa19.84■□□□□ 0.77
CMTM3-210ENST00000565666 NCANO14594 1321 aa19.83■□□□□ 0.77
CMTM3-210ENST00000565666 TRAV19A0A0A6YYK7 116 aa19.83■□□□□ 0.77
CMTM3-210ENST00000565666 SOBPA7XYQ1 873 aa19.83■□□□□ 0.77
CMTM3-210ENST00000565666 PRAMEF12O95522 483 aa19.83■□□□□ 0.77
CMTM3-210ENST00000565666 ERCC5P28715 1186 aaPredicted RBP19.83■□□□□ 0.77
CMTM3-210ENST00000565666 AVPR2P30518 371 aa19.83■□□□□ 0.77
CMTM3-210ENST00000565666 VCPP55072 806 aaKnown RBP19.83■□□□□ 0.77
CMTM3-210ENST00000565666 MAP3K7CLP57077 242 aa19.83■□□□□ 0.77
CMTM3-210ENST00000565666 MLF2Q15773 248 aaPredicted RBP19.83■□□□□ 0.77
CMTM3-210ENST00000565666 SLC44A4Q53GD3 710 aa19.83■□□□□ 0.77
CMTM3-210ENST00000565666 ASTLQ6HA08 431 aaPredicted RBP19.83■□□□□ 0.77
CMTM3-210ENST00000565666 CELF5Q8N6W0 485 aaKnown RBP19.83■□□□□ 0.77
CMTM3-210ENST00000565666 DNASE1L2Q92874 299 aa19.83■□□□□ 0.77
CMTM3-210ENST00000565666 FBXO32Q969P5 355 aa19.83■□□□□ 0.77
CMTM3-210ENST00000565666 TMEM176AQ96HP8 235 aa19.83■□□□□ 0.77
CMTM3-210ENST00000565666 SHDQ96IW2 340 aa19.83■□□□□ 0.77
CMTM3-210ENST00000565666 MED15Q96RN5 788 aa19.83■□□□□ 0.77
CMTM3-210ENST00000565666 HNRNPABQ99729 332 aaKnown RBP19.83■□□□□ 0.77
CMTM3-210ENST00000565666 TBC1D17Q9HA65 648 aa19.83■□□□□ 0.77
CMTM3-210ENST00000565666 RAPGEFL1Q9UHV5 662 aa19.83■□□□□ 0.77
CMTM3-210ENST00000565666 ABL1P00519 1130 aa19.82■□□□□ 0.76
CMTM3-210ENST00000565666 CKMP06732 381 aa19.82■□□□□ 0.76
CMTM3-210ENST00000565666 USP17L7P0C7H9 530 aa19.82■□□□□ 0.76
CMTM3-210ENST00000565666 YWHAQP27348 245 aa19.82■□□□□ 0.76
CMTM3-210ENST00000565666 MTIF2P46199 727 aaKnown RBP19.82■□□□□ 0.76
CMTM3-210ENST00000565666 SLC5A3P53794 718 aa19.82■□□□□ 0.76
CMTM3-210ENST00000565666 PRKCQQ04759 706 aa19.82■□□□□ 0.76
CMTM3-210ENST00000565666 CWF19L1Q69YN2 538 aaKnown RBP19.82■□□□□ 0.76
CMTM3-210ENST00000565666 FAM114A1Q8IWE2 563 aa19.82■□□□□ 0.76
CMTM3-210ENST00000565666 PPM1KQ8N3J5 372 aa19.82■□□□□ 0.76
CMTM3-210ENST00000565666 BPIFB1Q8TDL5 484 aa19.82■□□□□ 0.76
CMTM3-210ENST00000565666 JAKMIP2Q96AA8 810 aa19.82■□□□□ 0.76
CMTM3-210ENST00000565666 SMOQ99835 787 aa19.82■□□□□ 0.76
CMTM3-210ENST00000565666 KIF9Q9HAQ2 790 aa19.82■□□□□ 0.76
CMTM3-210ENST00000565666 TICRRQ7Z2Z1 1910 aa19.82■□□□□ 0.76
CMTM3-210ENST00000565666 ANAPC1Q9H1A4 1944 aa19.82■□□□□ 0.76
CMTM3-210ENST00000565666 C2orf78A6NCI8 922 aa19.81■□□□□ 0.76
CMTM3-210ENST00000565666 BEST1O76090 585 aa19.81■□□□□ 0.76
CMTM3-210ENST00000565666 NPR3P17342 541 aa19.81■□□□□ 0.76
CMTM3-210ENST00000565666 PPP3CCP48454 512 aa19.81■□□□□ 0.76
CMTM3-210ENST00000565666 PDE6CP51160 858 aa19.81■□□□□ 0.76
CMTM3-210ENST00000565666 CLCN5P51795 746 aa19.81■□□□□ 0.76
CMTM3-210ENST00000565666 RAD23BP54727 409 aa19.81■□□□□ 0.76
CMTM3-210ENST00000565666 TAF10Q12962 218 aa19.81■□□□□ 0.76
CMTM3-210ENST00000565666 ARHGAP29Q52LW3 1261 aa19.81■□□□□ 0.76
CMTM3-210ENST00000565666 PPP1R26Q5T8A7 1209 aaPredicted RBP19.81■□□□□ 0.76
CMTM3-210ENST00000565666 IER5LQ5T953 404 aa19.81■□□□□ 0.76
CMTM3-210ENST00000565666 SASS6Q6UVJ0 657 aa19.81■□□□□ 0.76
CMTM3-210ENST00000565666 SLC4A11Q8NBS3 891 aa19.81■□□□□ 0.76
CMTM3-210ENST00000565666 EHBP1Q8NDI1 1231 aa19.81■□□□□ 0.76
CMTM3-210ENST00000565666 PDZD8Q8NEN9 1154 aa19.81■□□□□ 0.76
CMTM3-210ENST00000565666 ZMIZ2Q8NF64 920 aa19.81■□□□□ 0.76
CMTM3-210ENST00000565666 CSGALNACT1Q8TDX6 532 aa19.81■□□□□ 0.76
CMTM3-210ENST00000565666 THAP9Q9H5L6 903 aa19.81■□□□□ 0.76
CMTM3-210ENST00000565666 CSNK1G1Q9HCP0 422 aa19.81■□□□□ 0.76
CMTM3-210ENST00000565666 HEBP1Q9NRV9 189 aa19.81■□□□□ 0.76
CMTM3-210ENST00000565666 TDP1Q9NUW8 608 aa19.81■□□□□ 0.76
CMTM3-210ENST00000565666 THG1LQ9NWX6 298 aaKnown RBP19.81■□□□□ 0.76
CMTM3-210ENST00000565666 PATJQ8NI35 1801 aa19.81■□□□□ 0.76
CMTM3-210ENST00000565666 TRIOO75962 3097 aa19.8■□□□□ 0.76
CMTM3-210ENST00000565666 CHADO15335 359 aa19.8■□□□□ 0.76
CMTM3-210ENST00000565666 FCHO2Q0JRZ9 810 aa19.8■□□□□ 0.76
CMTM3-210ENST00000565666 CT47A1Q5JQC4 288 aaPredicted RBP19.8■□□□□ 0.76
CMTM3-210ENST00000565666 PHLDB3Q6NSJ2 640 aa19.8■□□□□ 0.76
CMTM3-210ENST00000565666 RBM43Q6ZSC3 357 aaKnown RBP19.8■□□□□ 0.76
CMTM3-210ENST00000565666 CLEC20AQ6ZU45 233 aa19.8■□□□□ 0.76
CMTM3-210ENST00000565666 TPRG1Q6ZUI0 275 aa19.8■□□□□ 0.76
CMTM3-210ENST00000565666 ARL14EPQ8N8R7 260 aaPredicted RBP19.8■□□□□ 0.76
CMTM3-210ENST00000565666 TTC16Q8NEE8 873 aa19.8■□□□□ 0.76
CMTM3-210ENST00000565666 SCAMP5Q8TAC9 235 aa19.8■□□□□ 0.76
CMTM3-210ENST00000565666 USP13Q92995 863 aaPredicted RBP19.8■□□□□ 0.76
CMTM3-210ENST00000565666 CYP2S1Q96SQ9 504 aa19.8■□□□□ 0.76
CMTM3-210ENST00000565666 INTS2Q9H0H0 1204 aaKnown RBP19.8■□□□□ 0.76
CMTM3-210ENST00000565666 COMMD8Q9NX08 183 aa19.8■□□□□ 0.76
CMTM3-210ENST00000565666 GCNT4Q9P109 453 aa19.8■□□□□ 0.76
CMTM3-210ENST00000565666 CCL26Q9Y258 94 aa19.8■□□□□ 0.76
CMTM3-210ENST00000565666 MYO16Q9Y6X6 1858 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms