RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 SLC2A14Q8TDB8 520 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 ATRIPQ8WXE1 791 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 CPA5Q8WXQ8 436 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 MYLPFQ96A32 169 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 PBXIP1Q96AQ6 731 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 MSLNLQ96KJ4 702 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 B3GALT6Q96L58 329 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 SAMD11Q96NU1 681 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 MED10Q9BTT4 135 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 TTPALQ9BTX7 342 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 HERC2P3Q9BVR0 1158 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 PACSIN1Q9BY11 444 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 TSGA10Q9BZW7 698 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 ISCUQ9H1K1 167 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 LHX5Q9H2C1 402 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 LZTFL1Q9NQ48 299 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 CRTAC1Q9NQ79 661 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 CLEC1BQ9P126 229 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 INTUQ9ULD6 942 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 TFR2Q9UP52 801 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 PCDHB12Q9Y5F1 795 aa11.73□□□□□ -0.53
SF3B3-205ENST00000564899 FAM186AA6NE01 2351 aa11.72□□□□□ -0.53
SF3B3-205ENST00000564899 TSC2P49815 1807 aa11.72□□□□□ -0.53
SF3B3-205ENST00000564899 MYBPHLA2RUH7 354 aa11.72□□□□□ -0.53
SF3B3-205ENST00000564899 OR6C75A6NL08 312 aa11.72□□□□□ -0.53
SF3B3-205ENST00000564899 H7C4K7 107 aa11.72□□□□□ -0.53
SF3B3-205ENST00000564899 GLP2RO95838 553 aa11.72□□□□□ -0.53
SF3B3-205ENST00000564899 EFEMP2O95967 443 aa11.72□□□□□ -0.53
SF3B3-205ENST00000564899 PDGFBP01127 241 aaPredicted RBP11.72□□□□□ -0.53
SF3B3-205ENST00000564899 SOD2P04179 222 aa11.72□□□□□ -0.53
SF3B3-205ENST00000564899 TMEM253P0C7T8 217 aa11.72□□□□□ -0.53
SF3B3-205ENST00000564899 ABCB4P21439 1286 aa11.72□□□□□ -0.53
SF3B3-205ENST00000564899 BMPR1AP36894 532 aa11.72□□□□□ -0.53
SF3B3-205ENST00000564899 ARHGAP25P42331 645 aa11.72□□□□□ -0.53
SF3B3-205ENST00000564899 BCAT1P54687 386 aa11.72□□□□□ -0.53
SF3B3-205ENST00000564899 GALCP54803 685 aa11.72□□□□□ -0.53
SF3B3-205ENST00000564899 ADAM15Q13444 863 aa11.72□□□□□ -0.53
SF3B3-205ENST00000564899 MAPRE1Q15691 268 aaKnown RBP11.72□□□□□ -0.53
SF3B3-205ENST00000564899 USP41Q3LFD5 358 aa11.72□□□□□ -0.53
SF3B3-205ENST00000564899 CTXN3Q4LDR2 81 aa11.72□□□□□ -0.53
SF3B3-205ENST00000564899 RTP2Q5QGT7 225 aa11.72□□□□□ -0.53
SF3B3-205ENST00000564899 TTC30AQ86WT1 665 aa11.72□□□□□ -0.53
SF3B3-205ENST00000564899 RNF168Q8IYW5 571 aaPredicted RBP11.72□□□□□ -0.53
SF3B3-205ENST00000564899 UBA3Q8TBC4 463 aa11.72□□□□□ -0.53
SF3B3-205ENST00000564899 MYCBPAPQ8TBZ2 947 aa11.72□□□□□ -0.53
SF3B3-205ENST00000564899 CTNNBL1Q8WYA6 563 aaPredicted RBP11.72□□□□□ -0.53
SF3B3-205ENST00000564899 CLP1Q92989 425 aaKnown RBP11.72□□□□□ -0.53
SF3B3-205ENST00000564899 SECISBP2LQ93073 1101 aaKnown RBP11.72□□□□□ -0.53
SF3B3-205ENST00000564899 TMEM209Q96SK2 561 aa11.72□□□□□ -0.53
SF3B3-205ENST00000564899 HNRNPABQ99729 332 aaKnown RBP11.72□□□□□ -0.53
SF3B3-205ENST00000564899 C11orf70Q9BRQ4 267 aa11.72□□□□□ -0.53
SF3B3-205ENST00000564899 VN1R3Q9BXE9 311 aa11.72□□□□□ -0.53
SF3B3-205ENST00000564899 ZNF518BQ9C0D4 1074 aa11.72□□□□□ -0.53
SF3B3-205ENST00000564899 TRIM10Q9UDY6 481 aa11.72□□□□□ -0.53
SF3B3-205ENST00000564899 CD207Q9UJ71 328 aa11.72□□□□□ -0.53
SF3B3-205ENST00000564899 GTF3C4Q9UKN8 822 aa11.72□□□□□ -0.53
SF3B3-205ENST00000564899 ANKRD62A6NC57 917 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 PJA2O43164 708 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 KRT86O43790 486 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 GFRA3O60609 400 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 OR4Q2P0C623 313 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 FAM200BP0CF97 657 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 SETSIPP0DME0 302 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 GPD2P43304 727 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 PTPN5P54829 565 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 ZXDAP98168 799 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 PLCB3Q01970 1234 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 PDCLQ13371 301 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 MRPL58Q14197 206 aaKnown RBP11.71□□□□□ -0.53
SF3B3-205ENST00000564899 PKDCCQ504Y2 493 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 KIAA1841Q6NSI8 718 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 FAM171BQ6P995 826 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 MMS22LQ6ZRQ5 1243 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 ZNF662Q6ZS27 426 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 ANKS3Q6ZW76 656 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 MON1BQ7L1V2 547 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 BMP8AQ7Z5Y6 402 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 FAM35AQ86V20 835 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 PHF13Q86YI8 300 aaPredicted RBP11.71□□□□□ -0.53
SF3B3-205ENST00000564899 DCP1BQ8IZD4 617 aaKnown RBP11.71□□□□□ -0.53
SF3B3-205ENST00000564899 MCOLN2Q8IZK6 566 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 FUKQ8N0W3 1084 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 WDTC1Q8N5D0 677 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 ANKRD52Q8NB46 1076 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 MSANTD4Q8NCY6 345 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 RIN2Q8WYP3 895 aaPredicted RBP11.71□□□□□ -0.53
SF3B3-205ENST00000564899 ZNF653Q96CK0 615 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 TRIM11Q96F44 468 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 ASIC4Q96FT7 647 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 PCED1BQ96HM7 432 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 NOX5Q96PH1 765 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 PKMYT1Q99640 499 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 OXCT2Q9BYC2 517 aaPredicted RBP11.71□□□□□ -0.53
SF3B3-205ENST00000564899 B3GNT5Q9BYG0 378 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 LACRTQ9GZZ8 138 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 ZCWPW1Q9H0M4 648 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 KRT82Q9NSB4 513 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 ADAM22Q9P0K1 906 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 STK39Q9UEW8 545 aa11.71□□□□□ -0.53
SF3B3-205ENST00000564899 FAM50BQ9Y247 325 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms