RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 GATMP50440 423 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 FKBP3Q00688 224 aaKnown RBP3.5□□□□□ -1.85
CHD9-213ENST00000564845 PLD1Q13393 1074 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 FASTKD3Q14CZ7 662 aaKnown RBP3.5□□□□□ -1.85
CHD9-213ENST00000564845 UAP1Q16222 522 aaPredicted RBP3.5□□□□□ -1.85
CHD9-213ENST00000564845 C15orf59Q2T9L4 293 aaPredicted RBP3.5□□□□□ -1.85
CHD9-213ENST00000564845 FAM160B2Q86V87 743 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 LCA5Q86VQ0 697 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 GIPC2Q8TF65 315 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 SLC7A3Q8WY07 619 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 ALKBH8Q96BT7 664 aaKnown RBP3.5□□□□□ -1.85
CHD9-213ENST00000564845 GCNAQ96QF7 691 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 SYT11Q9BT88 431 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 SIX2Q9NPC8 291 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 XPNPEP1Q9NQW7 623 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 SLC9A2Q9UBY0 812 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 GABRQQ9UN88 632 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 PDHXO00330 501 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 CES2O00748 559 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 DPP6P42658 865 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 CASP8Q14790 479 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 IZUMO3Q5VZ72 239 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 SCIMPQ6UWF3 145 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 SCYL3Q8IZE3 742 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 DNAJB3Q8WWF6 145 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 L3MBTL3Q96JM7 780 aaPredicted RBP3.5□□□□□ -1.85
CHD9-213ENST00000564845 HSD17B14Q9BPX1 270 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 PRDM5Q9NQX1 630 aaPredicted RBP3.5□□□□□ -1.85
CHD9-213ENST00000564845 CHST7Q9NS84 486 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 HESX1Q9UBX0 185 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 F8VP50 259 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 ZBED4O75132 1171 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 TTKP33981 857 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 SLC12A2P55011 1212 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 GNA13Q14344 377 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 SNX17Q15036 470 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 ANKRD20A8PQ5CZ79 823 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 MDH1BQ5I0G3 518 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 CST9Q5W186 159 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 NEK5Q6P3R8 708 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 NEK10Q6ZWH5 1172 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 RAB44Q7Z6P3 723 aaPredicted RBP3.5□□□□□ -1.85
CHD9-213ENST00000564845 ZC3H18Q86VM9 953 aaKnown RBP3.5□□□□□ -1.85
CHD9-213ENST00000564845 ZCWPW1Q9H0M4 648 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 TUBGCP4Q9UGJ1 667 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 GRIN2DO15399 1336 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 KIF13BQ9NQT8 1826 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 CCDC130P13994 396 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 PNPLA4P41247 253 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 PRKCQQ04759 706 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 SPDYCQ5MJ68 293 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 INPP5DQ92835 1189 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 MMADHCQ9H3L0 296 aaPredicted RBP3.5□□□□□ -1.85
CHD9-213ENST00000564845 ARMC7Q9H6L4 198 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 STOML1Q9UBI4 398 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 PACSIN3Q9UKS6 424 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 BTBD19C9JJ37 291 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 GRIN3BO60391 1043 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 SOX30O94993 753 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 ITGB3P05106 788 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 IL4RP24394 825 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 ADORA2AP29274 412 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 GTF2H1P32780 548 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 MAPK8P45983 427 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 IREB2P48200 963 aaKnown RBP3.5□□□□□ -1.85
CHD9-213ENST00000564845 FMO5P49326 533 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 BASP1P80723 227 aaKnown RBP3.5□□□□□ -1.85
CHD9-213ENST00000564845 DBN1Q16643 649 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 PHKG1Q16816 387 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 FBXO48Q5FWF7 155 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 CREG2Q8IUH2 290 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 SPATA4Q8NEY3 305 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 EZH1Q92800 747 aaPredicted RBP3.5□□□□□ -1.85
CHD9-213ENST00000564845 RNF31Q96EP0 1072 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 TWNKQ96RR1 684 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 SGIP1Q9BQI5 828 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 TRIM54Q9BYV2 358 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 CCSER1Q9C0I3 900 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 NXF3Q9H4D5 531 aaKnown RBP3.5□□□□□ -1.85
CHD9-213ENST00000564845 SLC38A10Q9HBR0 1119 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 RTN3O95197 1032 aaPredicted RBP3.5□□□□□ -1.85
CHD9-213ENST00000564845 FGF19O95750 216 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 POMCP01189 267 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 IFNB1P01574 187 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 RPN2P04844 631 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 UBA1P22314 1058 aaKnown RBP3.5□□□□□ -1.85
CHD9-213ENST00000564845 LMO2P25791 158 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 HTR7P34969 479 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 MAN2A1Q16706 1144 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 TDRD10Q5VZ19 366 aaKnown RBP3.5□□□□□ -1.85
CHD9-213ENST00000564845 DPP9Q86TI2 863 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 IFNL1Q8IU54 200 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 WNT8BQ93098 351 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 CENPOQ9BU64 300 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 FUT8Q9BYC5 575 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 CYP26B1Q9NR63 512 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 AAASQ9NRG9 546 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 COL4A4P53420 1690 aaPredicted RBP3.5□□□□□ -1.85
CHD9-213ENST00000564845 A0A0G2JMZ2 1700 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 RGPD3A6NKT7 1758 aaPredicted RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms