RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 MAB21L3Q8N8X9 362 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 C12orf29Q8N999 325 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 SLC2A14Q8TDB8 520 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 WHAMMQ8TF30 809 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 E2F7Q96AV8 911 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 CYFIP2Q96F07 1278 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 TRMT2BQ96GJ1 504 aaKnown RBP10.55□□□□□ -0.72
CDH1-206ENST00000564676 CNOT6LQ96LI5 555 aaKnown RBP10.55□□□□□ -0.72
CDH1-206ENST00000564676 MYRFLQ96LU7 910 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 HEXIM2Q96MH2 286 aaKnown RBP10.55□□□□□ -0.72
CDH1-206ENST00000564676 NT5C1BQ96P26 610 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 MED15Q96RN5 788 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 KCNK16Q96T55 309 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 ARID3AQ99856 593 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 TRMT61BQ9BVS5 477 aaKnown RBP10.55□□□□□ -0.72
CDH1-206ENST00000564676 SLC46A2Q9BY10 475 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 TRPV4Q9HBA0 871 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 TRPC7Q9HCX4 862 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 SLC2A4RGQ9NR83 387 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 KRT82Q9NSB4 513 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 CISHQ9NSE2 258 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 CA14Q9ULX7 337 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 ZNF638Q14966 1978 aaKnown RBP10.55□□□□□ -0.72
CDH1-206ENST00000564676 ABL1P00519 1130 aa10.54□□□□□ -0.72
CDH1-206ENST00000564676 PDGFBP01127 241 aaPredicted RBP10.54□□□□□ -0.72
CDH1-206ENST00000564676 FAM200BP0CF97 657 aa10.54□□□□□ -0.72
CDH1-206ENST00000564676 PSMC3P17980 439 aa10.54□□□□□ -0.72
CDH1-206ENST00000564676 FCARP24071 287 aa10.54□□□□□ -0.72
CDH1-206ENST00000564676 TBXAS1P24557 533 aaPredicted RBP10.54□□□□□ -0.72
CDH1-206ENST00000564676 GDI1P31150 447 aa10.54□□□□□ -0.72
CDH1-206ENST00000564676 AVPR1AP37288 418 aa10.54□□□□□ -0.72
CDH1-206ENST00000564676 USP46P62068 366 aa10.54□□□□□ -0.72
CDH1-206ENST00000564676 TAF10Q12962 218 aa10.54□□□□□ -0.72
CDH1-206ENST00000564676 CT47A1Q5JQC4 288 aaPredicted RBP10.54□□□□□ -0.72
CDH1-206ENST00000564676 CCDC183Q5T5S1 534 aa10.54□□□□□ -0.72
CDH1-206ENST00000564676 VITQ6UXI7 678 aa10.54□□□□□ -0.72
CDH1-206ENST00000564676 PAQR9Q6ZVX9 377 aa10.54□□□□□ -0.72
CDH1-206ENST00000564676 TMEM150AQ86TG1 271 aa10.54□□□□□ -0.72
CDH1-206ENST00000564676 MON1AQ86VX9 555 aa10.54□□□□□ -0.72
CDH1-206ENST00000564676 FAM114A1Q8IWE2 563 aa10.54□□□□□ -0.72
CDH1-206ENST00000564676 NUP93Q8N1F7 819 aa10.54□□□□□ -0.72
CDH1-206ENST00000564676 FBXL6Q8N531 539 aa10.54□□□□□ -0.72
CDH1-206ENST00000564676 EHBP1Q8NDI1 1231 aa10.54□□□□□ -0.72
CDH1-206ENST00000564676 FLCNQ8NFG4 579 aa10.54□□□□□ -0.72
CDH1-206ENST00000564676 DEPDC1BQ8WUY9 529 aa10.54□□□□□ -0.72
CDH1-206ENST00000564676 TMEM176AQ96HP8 235 aa10.54□□□□□ -0.72
CDH1-206ENST00000564676 HNRNPABQ99729 332 aaKnown RBP10.54□□□□□ -0.72
CDH1-206ENST00000564676 THAP9Q9H5L6 903 aa10.54□□□□□ -0.72
CDH1-206ENST00000564676 FAM124BQ9H5Z6 455 aaPredicted RBP10.54□□□□□ -0.72
CDH1-206ENST00000564676 BRD9Q9H8M2 597 aa10.54□□□□□ -0.72
CDH1-206ENST00000564676 DMAP1Q9NPF5 467 aaPredicted RBP10.54□□□□□ -0.72
CDH1-206ENST00000564676 TMEM30AQ9NV96 361 aa10.54□□□□□ -0.72
CDH1-206ENST00000564676 TRPM5Q9NZQ8 1165 aa10.54□□□□□ -0.72
CDH1-206ENST00000564676 GREB1Q4ZG55 1949 aa10.53□□□□□ -0.72
CDH1-206ENST00000564676 DENND4CQ5VZ89 1909 aa10.53□□□□□ -0.72
CDH1-206ENST00000564676 TRAV19A0A0A6YYK7 116 aa10.53□□□□□ -0.72
CDH1-206ENST00000564676 SOBPA7XYQ1 873 aa10.53□□□□□ -0.72
CDH1-206ENST00000564676 ZNF263O14978 683 aa10.53□□□□□ -0.72
CDH1-206ENST00000564676 TADA3O75528 432 aa10.53□□□□□ -0.72
CDH1-206ENST00000564676 RTN3O95197 1032 aaPredicted RBP10.53□□□□□ -0.72
CDH1-206ENST00000564676 COL9A1P20849 921 aa10.53□□□□□ -0.72
CDH1-206ENST00000564676 YWHAQP27348 245 aa10.53□□□□□ -0.72
CDH1-206ENST00000564676 PPP3CCP48454 512 aa10.53□□□□□ -0.72
CDH1-206ENST00000564676 RAD23BP54727 409 aa10.53□□□□□ -0.72
CDH1-206ENST00000564676 MAP3K7CLP57077 242 aa10.53□□□□□ -0.72
CDH1-206ENST00000564676 SLC44A4Q53GD3 710 aa10.53□□□□□ -0.72
CDH1-206ENST00000564676 RBM43Q6ZSC3 357 aaKnown RBP10.53□□□□□ -0.72
CDH1-206ENST00000564676 MFSD6LQ8IWD5 586 aa10.53□□□□□ -0.72
CDH1-206ENST00000564676 CMTM8Q8IZV2 173 aa10.53□□□□□ -0.72
CDH1-206ENST00000564676 PPM1KQ8N3J5 372 aa10.53□□□□□ -0.72
CDH1-206ENST00000564676 PDCD7Q8N8D1 485 aaKnown RBP10.53□□□□□ -0.72
CDH1-206ENST00000564676 IRF7Q92985 503 aa10.53□□□□□ -0.72
CDH1-206ENST00000564676 FBXO32Q969P5 355 aa10.53□□□□□ -0.72
CDH1-206ENST00000564676 JAKMIP2Q96AA8 810 aa10.53□□□□□ -0.72
CDH1-206ENST00000564676 SHDQ96IW2 340 aa10.53□□□□□ -0.72
CDH1-206ENST00000564676 SLITRK1Q96PX8 696 aa10.53□□□□□ -0.72
CDH1-206ENST00000564676 SMOQ99835 787 aa10.53□□□□□ -0.72
CDH1-206ENST00000564676 TTLL2Q9BWV7 592 aa10.53□□□□□ -0.72
CDH1-206ENST00000564676 SMG9Q9H0W8 520 aaKnown RBP10.53□□□□□ -0.72
CDH1-206ENST00000564676 ARHGEF3Q9NR81 526 aa10.53□□□□□ -0.72
CDH1-206ENST00000564676 OBP2AQ9NY56 170 aa10.53□□□□□ -0.72
CDH1-206ENST00000564676 PCDHB4Q9Y5E5 795 aa10.53□□□□□ -0.72
CDH1-206ENST00000564676 ZDBF2Q9HCK1 2354 aa10.53□□□□□ -0.72
CDH1-206ENST00000564676 KRBA1A5PL33 1030 aa10.52□□□□□ -0.73
CDH1-206ENST00000564676 BEST1O76090 585 aa10.52□□□□□ -0.73
CDH1-206ENST00000564676 PRAMEF12O95522 483 aa10.52□□□□□ -0.73
CDH1-206ENST00000564676 CKMP06732 381 aa10.52□□□□□ -0.73
CDH1-206ENST00000564676 USP17L7P0C7H9 530 aa10.52□□□□□ -0.73
CDH1-206ENST00000564676 CD19P15391 556 aa10.52□□□□□ -0.73
CDH1-206ENST00000564676 HDCP19113 662 aa10.52□□□□□ -0.73
CDH1-206ENST00000564676 WEE1P30291 646 aa10.52□□□□□ -0.73
CDH1-206ENST00000564676 PDE6CP51160 858 aa10.52□□□□□ -0.73
CDH1-206ENST00000564676 SLC5A3P53794 718 aa10.52□□□□□ -0.73
CDH1-206ENST00000564676 MLF2Q15773 248 aaPredicted RBP10.52□□□□□ -0.73
CDH1-206ENST00000564676 HSP90AA4PQ58FG1 418 aa10.52□□□□□ -0.73
CDH1-206ENST00000564676 PPP1R26Q5T8A7 1209 aaPredicted RBP10.52□□□□□ -0.73
CDH1-206ENST00000564676 TMEM270Q6UE05 265 aa10.52□□□□□ -0.73
CDH1-206ENST00000564676 GBP6Q6ZN66 633 aa10.52□□□□□ -0.73
CDH1-206ENST00000564676 RRAGAQ7L523 313 aa10.52□□□□□ -0.73
CDH1-206ENST00000564676 IRF2BP1Q8IU81 584 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms