RNA–Protein interactions for RNA: ENST00000563960.1

AC138869.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC138869.3, Length 2,486 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138869.3-201ENST00000563960 OCM2P0CE71 109 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 OCMP0CE72 109 aaPredicted RBP9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 HSPA6P17066 643 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 SLC9A1P19634 815 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 TKTP29401 623 aaKnown RBP9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 MARCKSL1P49006 195 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 CDK16Q00536 496 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 FKBP3Q00688 224 aaKnown RBP9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 AMPD3Q01432 767 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 ZBTB16Q05516 673 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 FAM209AQ5JX71 171 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 USP6NLQ92738 828 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 TTC25Q96NG3 672 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 GPATCH1Q9BRR8 931 aaKnown RBP9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 THTPAQ9BU02 230 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 CENPOQ9BU64 300 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 OSBPL6Q9BZF3 934 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 KCNK13Q9HB14 408 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 TRNAU1APQ9NX07 287 aaKnown RBP9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 TTLL3Q9Y4R7 772 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 ATAD5Q96QE3 1844 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 MYH11P35749 1972 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 SYNGAP1Q96PV0 1343 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 PNMA6FA0A0J9YX94 578 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 FAM170AA1A519 330 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 MYMKA6NI61 221 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 UCHL3P15374 230 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 CA4P22748 312 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 PMLP29590 882 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 SLC18A1P54219 525 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 NAPAP54920 295 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 FKBP1BP68106 108 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 NR1H3Q13133 447 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 PPIL2Q13356 520 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 APOFQ13790 326 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 KRT81Q14533 505 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 EFTUD2Q15029 972 aaKnown RBP eCLIP9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 LETM2Q2VYF4 491 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 DCAF6Q58WW2 860 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 ARSHQ5FYA8 562 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 AAGABQ6PD74 315 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 DYMQ7RTS9 669 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 WDR75Q8IWA0 830 aaKnown RBP9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 C4orf33Q8N1A6 199 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 LZTR1Q8N653 840 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 CHURC1Q8WUH1 139 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 RFFLQ8WZ73 363 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 KRT35Q92764 455 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 BHMTQ93088 406 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 ATG4CQ96DT6 458 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 BIRC8Q96P09 236 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 BTBD9Q96Q07 612 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 GCNAQ96QF7 691 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 TSG101Q99816 390 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 TRABDQ9H4I3 376 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 WHRNQ9P202 907 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 SSX2IPQ9Y2D8 614 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 PCDHA1Q9Y5I3 950 aa9.56□□□□□ -0.88
AC138869.3-201ENST00000563960 NCANO14594 1321 aa9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 SMCO2A6NFE2 343 aa9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 C2orf71A6NGG8 1288 aa9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 ITM2AO43736 263 aa9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 CCNT1O60563 726 aaKnown RBP9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 MYCLP1P12525 358 aaPredicted RBP9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 ENDOUP21128 410 aaKnown RBP9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 PON1P27169 355 aa9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 GCAP28676 217 aa9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 HOXD13P35453 343 aa9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 NCKAP1LP55160 1127 aa9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 HTRA3P83110 453 aa9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 MYBPC1Q00872 1141 aa9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 SNAPC2Q13487 334 aa9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 CYP1B1Q16678 543 aa9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 ALLCQ8N6M5 410 aa9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 GSTCDQ8NEC7 633 aa9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 NUP85Q9BW27 656 aa9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 TMEM120AQ9BXJ8 343 aa9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 C17orf75Q9HAS0 396 aa9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 RAVER2Q9HCJ3 691 aaKnown RBP9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 RIC8AQ9NPQ8 531 aa9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 HOMER2Q9NSB8 354 aa9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 THEGQ9P2T0 379 aa9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 RSL24D1Q9UHA3 163 aaKnown RBP9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 FEM1BQ9UK73 627 aa9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 RBMX2Q9Y388 322 aaKnown RBP9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 MAD1L1Q9Y6D9 718 aa9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 A0A088AWK7 358 aa9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 A0A0G2JLL6 359 aaPredicted RBP9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 SOBPA7XYQ1 873 aa9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 FAM47E-STBD1D6RA91 191 aa9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 K7EPI3 171 aa9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 LAD1O00515 517 aa9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 CXCL11O14625 94 aa9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 CYP26A1O43174 497 aa9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 DENRO43583 198 aaKnown RBP9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 OR52Z1P0C646 297 aa9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 C6orf222P0C671 652 aaPredicted RBP9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 RBP3P10745 1247 aa9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 HSPA8P11142 646 aaKnown RBP9.55□□□□□ -0.88
AC138869.3-201ENST00000563960 PABPC1P11940 636 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms