RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 TPD52L1Q16890 204 aaPredicted RBP13.77□□□□□ -0.21
CTDSPL2-209ENST00000560620 PHLDB3Q6NSJ2 640 aa13.77□□□□□ -0.21
CTDSPL2-209ENST00000560620 ZNF852Q6ZMS4 543 aa13.77□□□□□ -0.21
CTDSPL2-209ENST00000560620 MON1AQ86VX9 555 aa13.77□□□□□ -0.21
CTDSPL2-209ENST00000560620 TTC8Q8TAM2 541 aa13.77□□□□□ -0.21
CTDSPL2-209ENST00000560620 NUP210Q8TEM1 1887 aaPredicted RBP13.77□□□□□ -0.21
CTDSPL2-209ENST00000560620 DNASE1L2Q92874 299 aa13.77□□□□□ -0.21
CTDSPL2-209ENST00000560620 SLC35C1Q96A29 364 aa13.77□□□□□ -0.21
CTDSPL2-209ENST00000560620 JAKMIP2Q96AA8 810 aa13.77□□□□□ -0.21
CTDSPL2-209ENST00000560620 RSPRY1Q96DX4 576 aa13.77□□□□□ -0.21
CTDSPL2-209ENST00000560620 ZFYVE19Q96K21 471 aa13.77□□□□□ -0.21
CTDSPL2-209ENST00000560620 SLITRK1Q96PX8 696 aa13.77□□□□□ -0.21
CTDSPL2-209ENST00000560620 CYP2S1Q96SQ9 504 aa13.77□□□□□ -0.21
CTDSPL2-209ENST00000560620 KCNK16Q96T55 309 aa13.77□□□□□ -0.21
CTDSPL2-209ENST00000560620 SRRTQ9BXP5 876 aaKnown RBP13.77□□□□□ -0.21
CTDSPL2-209ENST00000560620 CLSTN2Q9H4D0 955 aa13.77□□□□□ -0.21
CTDSPL2-209ENST00000560620 ARIH1Q9Y4X5 557 aaPredicted RBP13.77□□□□□ -0.21
CTDSPL2-209ENST00000560620 ZDBF2Q9HCK1 2354 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 MYH10P35580 1976 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 WDFY4Q6ZS81 3184 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 NCANO14594 1321 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 C2orf78A6NCI8 922 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 FAM170BA6NMN3 283 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 CHADO15335 359 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 TADA3O75528 432 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 RTN3O95197 1032 aaPredicted RBP13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 GNA14O95837 355 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 USP17L7P0C7H9 530 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 FAM200BP0CF97 657 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 CCDC192P0DO97 292 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 FMO5P49326 533 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 PTPN5P54829 565 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 MAP3K7CLP57077 242 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 STARD6P59095 220 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 INCA1Q0VD86 236 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 ARHGAP29Q52LW3 1261 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 CC2D1AQ6P1N0 951 aaPredicted RBP13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 FUKQ8N0W3 1084 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 NUP93Q8N1F7 819 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 CRYBG2Q8N1P7 616 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 TTC39CQ8N584 583 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 ARL14EPQ8N8R7 260 aaPredicted RBP13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 PJA1Q8NG27 643 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 TATDN2Q93075 761 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 CYFIP2Q96F07 1278 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 HEXIM2Q96MH2 286 aaKnown RBP13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 TWNKQ96RR1 684 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 CISHQ9NSE2 258 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 TMEM30AQ9NV96 361 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 OBP2AQ9NY56 170 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 NDRG2Q9UN36 371 aaKnown RBP13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 CCL26Q9Y258 94 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 MRPS17Q9Y2R5 130 aaKnown RBP13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 PIAS3Q9Y6X2 628 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 OBSL1O75147 1896 aa13.76□□□□□ -0.21
CTDSPL2-209ENST00000560620 GREB1Q4ZG55 1949 aa13.75□□□□□ -0.21
CTDSPL2-209ENST00000560620 DENND4CQ5VZ89 1909 aa13.75□□□□□ -0.21
CTDSPL2-209ENST00000560620 TICRRQ7Z2Z1 1910 aa13.75□□□□□ -0.21
CTDSPL2-209ENST00000560620 H0Y858 1186 aa13.75□□□□□ -0.21
CTDSPL2-209ENST00000560620 GALR2O43603 387 aaPredicted RBP13.75□□□□□ -0.21
CTDSPL2-209ENST00000560620 CILPO75339 1184 aa13.75□□□□□ -0.21
CTDSPL2-209ENST00000560620 HDCP19113 662 aa13.75□□□□□ -0.21
CTDSPL2-209ENST00000560620 YWHAQP27348 245 aa13.75□□□□□ -0.21
CTDSPL2-209ENST00000560620 WEE1P30291 646 aa13.75□□□□□ -0.21
CTDSPL2-209ENST00000560620 PPP3CCP48454 512 aa13.75□□□□□ -0.21
CTDSPL2-209ENST00000560620 PDE6CP51160 858 aa13.75□□□□□ -0.21
CTDSPL2-209ENST00000560620 YWHAEP62258 255 aaKnown RBP13.75□□□□□ -0.21
CTDSPL2-209ENST00000560620 FCHO2Q0JRZ9 810 aa13.75□□□□□ -0.21
CTDSPL2-209ENST00000560620 TAF10Q12962 218 aa13.75□□□□□ -0.21
CTDSPL2-209ENST00000560620 CLEC17AQ6ZS10 378 aa13.75□□□□□ -0.21
CTDSPL2-209ENST00000560620 PAQR9Q6ZVX9 377 aa13.75□□□□□ -0.21
CTDSPL2-209ENST00000560620 MLKLQ8NB16 471 aa13.75□□□□□ -0.21
CTDSPL2-209ENST00000560620 PRSS33Q8NF86 280 aa13.75□□□□□ -0.21
CTDSPL2-209ENST00000560620 USP13Q92995 863 aaPredicted RBP13.75□□□□□ -0.21
CTDSPL2-209ENST00000560620 FBXO32Q969P5 355 aa13.75□□□□□ -0.21
CTDSPL2-209ENST00000560620 ARID3AQ99856 593 aa13.75□□□□□ -0.21
CTDSPL2-209ENST00000560620 KIF9Q9HAQ2 790 aa13.75□□□□□ -0.21
CTDSPL2-209ENST00000560620 LMBRD1Q9NUN5 540 aa13.75□□□□□ -0.21
CTDSPL2-209ENST00000560620 RWDD2AQ9UIY3 292 aa13.75□□□□□ -0.21
CTDSPL2-209ENST00000560620 ZNF318Q5VUA4 2279 aa13.75□□□□□ -0.21
CTDSPL2-209ENST00000560620 SOBPA7XYQ1 873 aa13.74□□□□□ -0.21
CTDSPL2-209ENST00000560620 MAN2B1O00754 1011 aa13.74□□□□□ -0.21
CTDSPL2-209ENST00000560620 NCAM2O15394 837 aa13.74□□□□□ -0.21
CTDSPL2-209ENST00000560620 PLA2G5P39877 138 aa13.74□□□□□ -0.21
CTDSPL2-209ENST00000560620 NUBP1P53384 320 aa13.74□□□□□ -0.21
CTDSPL2-209ENST00000560620 SLC5A3P53794 718 aa13.74□□□□□ -0.21
CTDSPL2-209ENST00000560620 MCCD1P59942 119 aaPredicted RBP13.74□□□□□ -0.21
CTDSPL2-209ENST00000560620 PLCB2Q00722 1185 aa13.74□□□□□ -0.21
CTDSPL2-209ENST00000560620 KCNH2Q12809 1159 aa13.74□□□□□ -0.21
CTDSPL2-209ENST00000560620 CUL2Q13617 745 aa13.74□□□□□ -0.21
CTDSPL2-209ENST00000560620 FOXR2Q6PJQ5 311 aa13.74□□□□□ -0.21
CTDSPL2-209ENST00000560620 PDZD8Q8NEN9 1154 aa13.74□□□□□ -0.21
CTDSPL2-209ENST00000560620 SCAMP5Q8TAC9 235 aa13.74□□□□□ -0.21
CTDSPL2-209ENST00000560620 FAM3CQ92520 227 aa13.74□□□□□ -0.21
CTDSPL2-209ENST00000560620 ATOH1Q92858 354 aaPredicted RBP13.74□□□□□ -0.21
CTDSPL2-209ENST00000560620 TMEM176AQ96HP8 235 aa13.74□□□□□ -0.21
CTDSPL2-209ENST00000560620 FAXDC2Q96IV6 333 aa13.74□□□□□ -0.21
CTDSPL2-209ENST00000560620 NT5C1BQ96P26 610 aa13.74□□□□□ -0.21
CTDSPL2-209ENST00000560620 LRRC3BQ96PB8 259 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms