RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 EPHA10Q5JZY3 1008 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 ZNF362Q5T0B9 420 aaPredicted RBP1.94□□□□□ -2.1
USP3-209ENST00000558925 FAM102AQ5T9C2 384 aaPredicted RBP1.94□□□□□ -2.1
USP3-209ENST00000558925 AGAP9Q5VTM2 703 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 CACHD1Q5VU97 1274 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 FAM160B1Q5W0V3 765 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 TSHZ3Q63HK5 1081 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 PLAG1Q6DJT9 500 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 KIAA0408Q6ZU52 694 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 BEND5Q7L4P6 421 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 FAM83AQ86UY5 434 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 CCDC28AQ8IWP9 274 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 AOPEPQ8N6M6 819 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 PSD4Q8NDX1 1056 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 MDGA1Q8NFP4 955 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 OR56A1Q8NGH5 318 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 CYP2W1Q8TAV3 490 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 FAM71BQ8TC56 605 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 STT3BQ8TCJ2 826 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 TMEM171Q8WVE6 324 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 TRAPPC12Q8WVT3 735 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 ST8SIA2Q92186 375 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 DDX17Q92841 729 aaKnown RBP1.94□□□□□ -2.1
USP3-209ENST00000558925 GCC1Q96CN9 775 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 FAM89AQ96GI7 184 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 TRIB1Q96RU8 372 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 PPP1R9BQ96SB3 815 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 SMOQ99835 787 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 ISCA1Q9BUE6 129 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 CNPPD1Q9BV87 410 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 MAGEB5Q9BZ81 275 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 PCDHAC1Q9H158 963 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 EPS8L2Q9H6S3 715 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 CXorf36Q9H7Y0 433 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 CASS4Q9NQ75 786 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 HEYLQ9NQ87 328 aaPredicted RBP1.94□□□□□ -2.1
USP3-209ENST00000558925 GGA3Q9NZ52 723 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 CTTNBP2NLQ9P2B4 639 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 DNMT3BQ9UBC3 853 aaKnown RBP1.94□□□□□ -2.1
USP3-209ENST00000558925 ZMYND8Q9ULU4 1186 aaPredicted RBP1.94□□□□□ -2.1
USP3-209ENST00000558925 GTF2A1LQ9UNN4 478 aa1.94□□□□□ -2.1
USP3-209ENST00000558925 FER1L4A9Z1Z3 1794 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 SETD1BQ9UPS6 1966 aaKnown RBP1.93□□□□□ -2.1
USP3-209ENST00000558925 A0A0B4J269 797 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 LOC102723971A0A1B0GUV8 181 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 RRN3P2A6NIE6 340 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 CAPN14A8MX76 684 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 AGPSO00116 658 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 EYA2O00167 538 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 FCHO1O14526 889 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 TOR1BO14657 336 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 AREL1O15033 823 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 NCAM2O15394 837 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 KCNQ3O43525 872 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 SRGAP2O75044 1071 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 PIAS2O75928 621 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 SUN1O94901 812 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 RASAL1O95294 804 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 VNN1O95497 513 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 CHEK2O96017 543 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 GCP02774 474 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 POLBP06746 335 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 ITGA5P08648 1049 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 SPATA31D3P0C874 917 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 ARP10275 920 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 CKMT1AP12532 417 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 HGFP14210 728 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 TPH1P17752 444 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 EGR1P18146 543 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 CNTFP26441 200 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 MST1P26927 711 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 ADORA2AP29274 412 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 GCLCP48506 637 aaPredicted RBP1.93□□□□□ -2.1
USP3-209ENST00000558925 SCNN1GP51170 649 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 COPAP53621 1224 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 PNLIPRP1P54315 467 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 FAM189BP81408 668 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 SP2Q02086 613 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 KRT17Q04695 432 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 LMOD3Q0VAK6 560 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 PPFIA1Q13136 1202 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 FHL3Q13643 280 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 ARHGEF7Q14155 803 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 PTK2BQ14289 1009 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 IQCB1Q15051 598 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 NPY5RQ15761 445 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 CD300EQ496F6 205 aaPredicted RBP1.93□□□□□ -2.1
USP3-209ENST00000558925 PDCD4Q53EL6 469 aaKnown RBP1.93□□□□□ -2.1
USP3-209ENST00000558925 EEF1AKMT2Q5JPI9 291 aaKnown RBP1.93□□□□□ -2.1
USP3-209ENST00000558925 LCE1EQ5T753 118 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 VPS53Q5VIR6 699 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 MANEALQ5VSG8 457 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 MFSD5Q6N075 450 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 TMEM108Q6UXF1 575 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 CYP26C1Q6V0L0 522 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 LRRC55Q6ZSA7 311 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 SPATA31D4Q6ZUB0 917 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 KRT28Q7Z3Y7 464 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 MOGAT3Q86VF5 341 aa1.93□□□□□ -2.1
USP3-209ENST00000558925 GAS2L3Q86XJ1 694 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms