RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 BTBD11A6QL63 1104 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 KRTAP9-7A8MTY7 169 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 KPNA5O15131 536 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 RRP9O43818 475 aaKnown RBP2.04□□□□□ -2.08
HIF1A-212ENST00000557538 SKAP2O75563 359 aaPredicted RBP2.04□□□□□ -2.08
HIF1A-212ENST00000557538 CDKL5O76039 1030 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 NXPH3O95157 252 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 WT1P19544 449 aaPredicted RBP2.04□□□□□ -2.08
HIF1A-212ENST00000557538 ITGALP20701 1170 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 CST5P28325 142 aaPredicted RBP2.04□□□□□ -2.08
HIF1A-212ENST00000557538 EPHA3P29320 983 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 HTR7P34969 479 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 PTGS2P35354 604 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 NDUFV1P49821 464 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 RAPGEF1Q13905 1077 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 SPDYE7PQ495Y7 208 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 CERCAMQ5T4B2 595 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 FNDC7Q5VTL7 733 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 ABRAQ8N0Z2 381 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 CLASRPQ8N2M8 674 aaKnown RBP2.04□□□□□ -2.08
HIF1A-212ENST00000557538 SLC15A4Q8N697 577 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 SMCR8Q8TEV9 937 aaPredicted RBP2.04□□□□□ -2.08
HIF1A-212ENST00000557538 POF1BQ8WVV4 589 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 P2RY11Q96G91 374 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 CRB3Q9BUF7 120 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 KATNAL1Q9BW62 490 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 KLC4Q9NSK0 619 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 TMLHEQ9NVH6 421 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 HERC5Q9UII4 1024 aaKnown RBP2.04□□□□□ -2.08
HIF1A-212ENST00000557538 SLC39A10Q9ULF5 831 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 DAAM1Q9Y4D1 1078 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 hCG_1642624A0A1W2PR95 340 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 M0QYG6 137 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 MYO1CO00159 1063 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 CD19P15391 556 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 ZNF134P52741 427 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 FAM189BP81408 668 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 MTAPQ13126 283 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 KCNJ12Q14500 433 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 PUM3Q15397 648 aaKnown RBP2.04□□□□□ -2.08
HIF1A-212ENST00000557538 ELF2Q15723 593 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 PLA1AQ53H76 456 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 MANEALQ5VSG8 457 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 RFX8Q6ZV50 586 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 GPR149Q86SP6 731 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 CNPY4Q8N129 248 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 SUN3Q8TAQ9 357 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 BPIFB1Q8TDL5 484 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 SOCS4Q8WXH5 440 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 ZNF566Q969W8 418 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 MPHOSPH6Q99547 160 aaKnown RBP2.04□□□□□ -2.08
HIF1A-212ENST00000557538 TIMP4Q99727 224 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 PTPRHQ9HD43 1115 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 HEYLQ9NQ87 328 aaPredicted RBP2.04□□□□□ -2.08
HIF1A-212ENST00000557538 PDP2Q9P2J9 529 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 MAN2B2Q9Y2E5 1009 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 DGKBQ9Y6T7 804 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 DCAF1Q9Y4B6 1507 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 HK1P19367 917 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 DDX6P26196 483 aaKnown RBP eCLIP2.04□□□□□ -2.08
HIF1A-212ENST00000557538 CD6P30203 668 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 UQCRC1P31930 480 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 CTSWP56202 376 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 GALNT1Q10472 559 aaPredicted RBP2.04□□□□□ -2.08
HIF1A-212ENST00000557538 PPFIA1Q13136 1202 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 STK3Q13188 491 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 PFKFB4Q16877 469 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 ZNF618Q5T7W0 954 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 CRIP3Q6Q6R5 217 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 RASGRP2Q7LDG7 609 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 FBXO18Q8NFZ0 1043 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 LOXL4Q96JB6 756 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 ADOQ96SZ5 270 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 ZNF768Q9H5H4 540 aaKnown RBP2.04□□□□□ -2.08
HIF1A-212ENST00000557538 MRPS18AQ9NVS2 196 aaKnown RBP2.04□□□□□ -2.08
HIF1A-212ENST00000557538 IGSF9Q9P2J2 1179 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 DNAJB11Q9UBS4 358 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 NAP1L2Q9ULW6 460 aaPredicted RBP2.04□□□□□ -2.08
HIF1A-212ENST00000557538 CORO2BQ9UQ03 480 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 NOX1Q9Y5S8 564 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 A0A0B4J269 797 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 CENPVL1A0A0U1RR11 272 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 TMEM233B4DJY2 109 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 H3BNC9 293 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 PCDH17O14917 1159 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 ESRRBO95718 433 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 ANXA6P08133 673 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 MMP8P22894 467 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 PCSK6P29122 969 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 HALP42357 657 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 DGKQP52824 942 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 PLP2Q04941 152 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 TUBB3Q13509 450 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 TBRG1Q3YBR2 411 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 ANKRD16Q6P6B7 361 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 C1orf228Q6PIY5 440 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 Q6ZPA2 131 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 GALNT15Q8N3T1 639 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 LINC01465Q8N7H1 131 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms