RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 TMEM150AQ86TG1 271 aa11.33□□□□□ -0.6
SHMT2-213ENST00000554600 MON1AQ86VX9 555 aa11.33□□□□□ -0.6
SHMT2-213ENST00000554600 UNC93AQ86WB7 457 aa11.33□□□□□ -0.6
SHMT2-213ENST00000554600 DTWD2Q8NBA8 298 aa11.33□□□□□ -0.6
SHMT2-213ENST00000554600 PJA1Q8NG27 643 aa11.33□□□□□ -0.6
SHMT2-213ENST00000554600 TTC8Q8TAM2 541 aa11.33□□□□□ -0.6
SHMT2-213ENST00000554600 BPIFB1Q8TDL5 484 aa11.33□□□□□ -0.6
SHMT2-213ENST00000554600 JAKMIP2Q96AA8 810 aa11.33□□□□□ -0.6
SHMT2-213ENST00000554600 SMARCD1Q96GM5 515 aa11.33□□□□□ -0.6
SHMT2-213ENST00000554600 ZFYVE19Q96K21 471 aa11.33□□□□□ -0.6
SHMT2-213ENST00000554600 C8orf48Q96LL4 319 aa11.33□□□□□ -0.6
SHMT2-213ENST00000554600 MYRFLQ96LU7 910 aa11.33□□□□□ -0.6
SHMT2-213ENST00000554600 BCO2Q9BYV7 579 aa11.33□□□□□ -0.6
SHMT2-213ENST00000554600 CYP3A43Q9HB55 503 aa11.33□□□□□ -0.6
SHMT2-213ENST00000554600 APOBEC3GQ9HC16 384 aaKnown RBP11.33□□□□□ -0.6
SHMT2-213ENST00000554600 METTL14Q9HCE5 456 aaKnown RBP11.33□□□□□ -0.6
SHMT2-213ENST00000554600 THG1LQ9NWX6 298 aaKnown RBP11.33□□□□□ -0.6
SHMT2-213ENST00000554600 TRPM5Q9NZQ8 1165 aa11.33□□□□□ -0.6
SHMT2-213ENST00000554600 NDRG2Q9UN36 371 aaKnown RBP11.33□□□□□ -0.6
SHMT2-213ENST00000554600 MYO18AQ92614 2054 aaKnown RBP11.32□□□□□ -0.6
SHMT2-213ENST00000554600 FAM170BA6NMN3 283 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 CHADO15335 359 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 TADA3O75528 432 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 USP17L7P0C7H9 530 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 BMP6P22004 513 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 NUBP1P53384 320 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 CACNA2D1P54289 1103 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 NHLH1Q02575 133 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 TCF15Q12870 199 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 LRMPQ12912 555 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 ZNF394Q53GI3 561 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 CC2D1AQ6P1N0 951 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-213ENST00000554600 ZNF852Q6ZMS4 543 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 FILIP1Q7Z7B0 1213 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 CREBRFQ8IUR6 639 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 ZC3H3Q8IXZ2 948 aaKnown RBP11.32□□□□□ -0.6
SHMT2-213ENST00000554600 CCDC105Q8IYK2 499 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 ARL14EPQ8N8R7 260 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-213ENST00000554600 C12orf29Q8N999 325 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 SLC2A14Q8TDB8 520 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 SEMA4DQ92854 862 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 ATOH1Q92858 354 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-213ENST00000554600 USP13Q92995 863 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-213ENST00000554600 FBXO32Q969P5 355 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 CEP63Q96MT8 703 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 SLITRK1Q96PX8 696 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 CYP2S1Q96SQ9 504 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 KCNK16Q96T55 309 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 NT5C1AQ9BXI3 368 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 LTB4R2Q9NPC1 389 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 DMAP1Q9NPF5 467 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-213ENST00000554600 TDP1Q9NUW8 608 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 FAM86C1Q9NVL1 165 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 RAB20Q9NX57 234 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 OBP2AQ9NY56 170 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 KIAA1468Q9P260 1216 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 CCL26Q9Y258 94 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 MRPS17Q9Y2R5 130 aaKnown RBP11.32□□□□□ -0.6
SHMT2-213ENST00000554600 PIAS3Q9Y6X2 628 aa11.32□□□□□ -0.6
SHMT2-213ENST00000554600 RIF1Q5UIP0 2472 aaKnown RBP11.32□□□□□ -0.6
SHMT2-213ENST00000554600 C2orf78A6NCI8 922 aa11.31□□□□□ -0.6
SHMT2-213ENST00000554600 MAN2B1O00754 1011 aa11.31□□□□□ -0.6
SHMT2-213ENST00000554600 NCAM2O15394 837 aa11.31□□□□□ -0.6
SHMT2-213ENST00000554600 RTN3O95197 1032 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-213ENST00000554600 FAM200BP0CF97 657 aa11.31□□□□□ -0.6
SHMT2-213ENST00000554600 HDCP19113 662 aa11.31□□□□□ -0.6
SHMT2-213ENST00000554600 YWHAQP27348 245 aa11.31□□□□□ -0.6
SHMT2-213ENST00000554600 WEE1P30291 646 aa11.31□□□□□ -0.6
SHMT2-213ENST00000554600 MAP3K7CLP57077 242 aa11.31□□□□□ -0.6
SHMT2-213ENST00000554600 FCHO2Q0JRZ9 810 aa11.31□□□□□ -0.6
SHMT2-213ENST00000554600 INCA1Q0VD86 236 aa11.31□□□□□ -0.6
SHMT2-213ENST00000554600 TAF10Q12962 218 aa11.31□□□□□ -0.6
SHMT2-213ENST00000554600 CBWD6Q4V339 395 aa11.31□□□□□ -0.6
SHMT2-213ENST00000554600 CBWD3Q5JTY5 395 aa11.31□□□□□ -0.6
SHMT2-213ENST00000554600 CBWD5Q5RIA9 395 aa11.31□□□□□ -0.6
SHMT2-213ENST00000554600 TTI2Q6NXR4 508 aa11.31□□□□□ -0.6
SHMT2-213ENST00000554600 FRMD5Q7Z6J6 570 aa11.31□□□□□ -0.6
SHMT2-213ENST00000554600 FUKQ8N0W3 1084 aa11.31□□□□□ -0.6
SHMT2-213ENST00000554600 NUP93Q8N1F7 819 aa11.31□□□□□ -0.6
SHMT2-213ENST00000554600 CRYBG2Q8N1P7 616 aa11.31□□□□□ -0.6
SHMT2-213ENST00000554600 TRIML1Q8N9V2 468 aa11.31□□□□□ -0.6
SHMT2-213ENST00000554600 TATDN2Q93075 761 aa11.31□□□□□ -0.6
SHMT2-213ENST00000554600 SLC35C1Q96A29 364 aa11.31□□□□□ -0.6
SHMT2-213ENST00000554600 CEP295NLQ96MC4 621 aa11.31□□□□□ -0.6
SHMT2-213ENST00000554600 LRRC3BQ96PB8 259 aa11.31□□□□□ -0.6
SHMT2-213ENST00000554600 TWNKQ96RR1 684 aa11.31□□□□□ -0.6
SHMT2-213ENST00000554600 DUSP9Q99956 384 aaKnown RBP11.31□□□□□ -0.6
SHMT2-213ENST00000554600 SRRTQ9BXP5 876 aaKnown RBP11.31□□□□□ -0.6
SHMT2-213ENST00000554600 IRF2BPLQ9H1B7 796 aa11.31□□□□□ -0.6
SHMT2-213ENST00000554600 CLSTN2Q9H4D0 955 aa11.31□□□□□ -0.6
SHMT2-213ENST00000554600 KIF9Q9HAQ2 790 aa11.31□□□□□ -0.6
SHMT2-213ENST00000554600 TMEM30AQ9NV96 361 aa11.31□□□□□ -0.6
SHMT2-213ENST00000554600 MTF2Q9Y483 593 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-213ENST00000554600 RALGAPA1Q6GYQ0 2036 aa11.31□□□□□ -0.6
SHMT2-213ENST00000554600 PTPRZ1P23471 2315 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-213ENST00000554600 FAM186AA6NE01 2351 aa11.31□□□□□ -0.6
SHMT2-213ENST00000554600 CFAP54Q96N23 3096 aa11.3□□□□□ -0.6
SHMT2-213ENST00000554600 SPAG17Q6Q759 2223 aa11.3□□□□□ -0.6
SHMT2-213ENST00000554600 SOBPA7XYQ1 873 aa11.3□□□□□ -0.6
SHMT2-213ENST00000554600 CILPO75339 1184 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms