RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 GDAP2Q9NXN4 497 aa14.33□□□□□ -0.12
NUP188-211ENST00000550219 UXTQ9UBK9 157 aaPredicted RBP14.33□□□□□ -0.12
NUP188-211ENST00000550219 MED19A0JLT2 244 aaPredicted RBP14.32□□□□□ -0.12
NUP188-211ENST00000550219 ATP2C2O75185 946 aa14.32□□□□□ -0.12
NUP188-211ENST00000550219 NOL4O94818 638 aa14.32□□□□□ -0.12
NUP188-211ENST00000550219 CKMP06732 381 aa14.32□□□□□ -0.12
NUP188-211ENST00000550219 DLATP10515 647 aaKnown RBP14.32□□□□□ -0.12
NUP188-211ENST00000550219 LHX1P48742 406 aa14.32□□□□□ -0.12
NUP188-211ENST00000550219 LRRC63Q05C16 580 aa14.32□□□□□ -0.12
NUP188-211ENST00000550219 SPEM2Q0P670 501 aa14.32□□□□□ -0.12
NUP188-211ENST00000550219 RUNX3Q13761 415 aa14.32□□□□□ -0.12
NUP188-211ENST00000550219 CCINQ13939 588 aa14.32□□□□□ -0.12
NUP188-211ENST00000550219 SIM2Q14190 667 aaPredicted RBP14.32□□□□□ -0.12
NUP188-211ENST00000550219 SURF1Q15526 300 aa14.32□□□□□ -0.12
NUP188-211ENST00000550219 EDRF1Q3B7T1 1238 aa14.32□□□□□ -0.12
NUP188-211ENST00000550219 ANKRD40Q6AI12 368 aa14.32□□□□□ -0.12
NUP188-211ENST00000550219 LAIR1Q6GTX8 287 aa14.32□□□□□ -0.12
NUP188-211ENST00000550219 KLHL10Q6JEL2 608 aa14.32□□□□□ -0.12
NUP188-211ENST00000550219 HS2ST1Q7LGA3 356 aa14.32□□□□□ -0.12
NUP188-211ENST00000550219 SLC9A9Q8IVB4 645 aa14.32□□□□□ -0.12
NUP188-211ENST00000550219 MMS19Q96T76 1030 aa14.32□□□□□ -0.12
NUP188-211ENST00000550219 PKMYT1Q99640 499 aa14.32□□□□□ -0.12
NUP188-211ENST00000550219 DUSP9Q99956 384 aaKnown RBP14.32□□□□□ -0.12
NUP188-211ENST00000550219 PARD6AQ9NPB6 346 aa14.32□□□□□ -0.12
NUP188-211ENST00000550219 AGPAT3Q9NRZ7 376 aa14.32□□□□□ -0.12
NUP188-211ENST00000550219 DMAC2Q9NW81 257 aa14.32□□□□□ -0.12
NUP188-211ENST00000550219 ZMYM5Q9UJ78 669 aa14.32□□□□□ -0.12
NUP188-211ENST00000550219 CDV3Q9UKY7 258 aaKnown RBP14.32□□□□□ -0.12
NUP188-211ENST00000550219 CTNND2Q9UQB3 1225 aa14.32□□□□□ -0.12
NUP188-211ENST00000550219 TRAV19A0A0A6YYK7 116 aa14.31□□□□□ -0.12
NUP188-211ENST00000550219 BICDL2A1A5D9 508 aa14.31□□□□□ -0.12
NUP188-211ENST00000550219 K7ESF4 209 aa14.31□□□□□ -0.12
NUP188-211ENST00000550219 CLIC2O15247 247 aa14.31□□□□□ -0.12
NUP188-211ENST00000550219 CALUO43852 315 aaPredicted RBP14.31□□□□□ -0.12
NUP188-211ENST00000550219 PDGFRBP09619 1106 aa14.31□□□□□ -0.12
NUP188-211ENST00000550219 TNNI1P19237 187 aa14.31□□□□□ -0.12
NUP188-211ENST00000550219 LMO2P25791 158 aa14.31□□□□□ -0.12
NUP188-211ENST00000550219 CYP27A1Q02318 531 aa14.31□□□□□ -0.12
NUP188-211ENST00000550219 LMNB2Q03252 620 aa14.31□□□□□ -0.12
NUP188-211ENST00000550219 MTF1Q14872 753 aa14.31□□□□□ -0.12
NUP188-211ENST00000550219 DUOXA2Q1HG44 320 aa14.31□□□□□ -0.12
NUP188-211ENST00000550219 PKN3Q6P5Z2 889 aa14.31□□□□□ -0.12
NUP188-211ENST00000550219 MAMSTRQ6ZN01 415 aa14.31□□□□□ -0.12
NUP188-211ENST00000550219 C4orf50Q6ZRC1 276 aa14.31□□□□□ -0.12
NUP188-211ENST00000550219 CEP68Q76N32 757 aa14.31□□□□□ -0.12
NUP188-211ENST00000550219 MON1AQ86VX9 555 aa14.31□□□□□ -0.12
NUP188-211ENST00000550219 LONP2Q86WA8 852 aa14.31□□□□□ -0.12
NUP188-211ENST00000550219 WDR49Q8IV35 697 aa14.31□□□□□ -0.12
NUP188-211ENST00000550219 GPR161Q8N6U8 529 aaKnown RBP14.31□□□□□ -0.12
NUP188-211ENST00000550219 SPATA18Q8TC71 538 aa14.31□□□□□ -0.12
NUP188-211ENST00000550219 ENOX1Q8TC92 643 aaKnown RBP14.31□□□□□ -0.12
NUP188-211ENST00000550219 KBTBD7Q8WVZ9 684 aa14.31□□□□□ -0.12
NUP188-211ENST00000550219 FNBP1Q96RU3 617 aa14.31□□□□□ -0.12
NUP188-211ENST00000550219 FAM83CQ9BQN1 747 aa14.31□□□□□ -0.12
NUP188-211ENST00000550219 NAT10Q9H0A0 1025 aaKnown RBP14.31□□□□□ -0.12
NUP188-211ENST00000550219 TSPY26PQ9H489 355 aa14.31□□□□□ -0.12
NUP188-211ENST00000550219 TRIM49BA6NDI0 452 aa14.3□□□□□ -0.12
NUP188-211ENST00000550219 OTOL1A6NHN0 477 aaPredicted RBP14.3□□□□□ -0.12
NUP188-211ENST00000550219 GABRDO14764 452 aa14.3□□□□□ -0.12
NUP188-211ENST00000550219 BDNFP23560 247 aa14.3□□□□□ -0.12
NUP188-211ENST00000550219 IFNAR2P48551 515 aa14.3□□□□□ -0.12
NUP188-211ENST00000550219 PXNP49023 591 aaPredicted RBP14.3□□□□□ -0.12
NUP188-211ENST00000550219 ZNF165P49910 485 aa14.3□□□□□ -0.12
NUP188-211ENST00000550219 STX17P56962 302 aa14.3□□□□□ -0.12
NUP188-211ENST00000550219 GRSF1Q12849 480 aaKnown RBP eCLIP14.3□□□□□ -0.12
NUP188-211ENST00000550219 IQCB1Q15051 598 aa14.3□□□□□ -0.12
NUP188-211ENST00000550219 SNRNP35Q16560 246 aaKnown RBP14.3□□□□□ -0.12
NUP188-211ENST00000550219 CFAP221Q4G0U5 840 aa14.3□□□□□ -0.12
NUP188-211ENST00000550219 NAIF1Q69YI7 327 aaPredicted RBP14.3□□□□□ -0.12
NUP188-211ENST00000550219 FSTL4Q6MZW2 842 aa14.3□□□□□ -0.12
NUP188-211ENST00000550219 CCDC127Q96BQ5 260 aa14.3□□□□□ -0.12
NUP188-211ENST00000550219 TRMT2BQ96GJ1 504 aaKnown RBP14.3□□□□□ -0.12
NUP188-211ENST00000550219 FUBP3Q96I24 572 aaKnown RBP eCLIP14.3□□□□□ -0.12
NUP188-211ENST00000550219 SLC22A12Q96S37 553 aa14.3□□□□□ -0.12
NUP188-211ENST00000550219 CGRRF1Q99675 332 aa14.3□□□□□ -0.12
NUP188-211ENST00000550219 TSG101Q99816 390 aa14.3□□□□□ -0.12
NUP188-211ENST00000550219 KIAA1586Q9HCI6 787 aa14.3□□□□□ -0.12
NUP188-211ENST00000550219 CRTAC1Q9NQ79 661 aa14.3□□□□□ -0.12
NUP188-211ENST00000550219 DLL3Q9NYJ7 618 aa14.3□□□□□ -0.12
NUP188-211ENST00000550219 MAGEC2Q9UBF1 373 aaPredicted RBP14.3□□□□□ -0.12
NUP188-211ENST00000550219 CDH9Q9ULB4 789 aa14.3□□□□□ -0.12
NUP188-211ENST00000550219 WNT6Q9Y6F9 365 aa14.3□□□□□ -0.12
NUP188-211ENST00000550219 OTOGLQ3ZCN5 2332 aa14.3□□□□□ -0.12
NUP188-211ENST00000550219 DENND4CQ5VZ89 1909 aa14.29□□□□□ -0.12
NUP188-211ENST00000550219 C2orf78A6NCI8 922 aa14.29□□□□□ -0.12
NUP188-211ENST00000550219 IKBKBO14920 756 aa14.29□□□□□ -0.12
NUP188-211ENST00000550219 HRO43593 1189 aa14.29□□□□□ -0.12
NUP188-211ENST00000550219 RNF40O75150 1001 aa14.29□□□□□ -0.12
NUP188-211ENST00000550219 PAPSS2O95340 614 aaPredicted RBP14.29□□□□□ -0.12
NUP188-211ENST00000550219 EGFP01133 1207 aa14.29□□□□□ -0.12
NUP188-211ENST00000550219 NR3C1P04150 777 aa14.29□□□□□ -0.12
NUP188-211ENST00000550219 USP17L7P0C7H9 530 aa14.29□□□□□ -0.12
NUP188-211ENST00000550219 WARSP23381 471 aaKnown RBP14.29□□□□□ -0.12
NUP188-211ENST00000550219 ANXA13P27216 316 aa14.29□□□□□ -0.12
NUP188-211ENST00000550219 GRIK1P39086 918 aa14.29□□□□□ -0.12
NUP188-211ENST00000550219 TNNC1P63316 161 aa14.29□□□□□ -0.12
NUP188-211ENST00000550219 FKBP3Q00688 224 aaKnown RBP14.29□□□□□ -0.12
NUP188-211ENST00000550219 IFRD2Q12894 506 aaPredicted RBP14.29□□□□□ -0.12
NUP188-211ENST00000550219 USP4Q13107 963 aa14.29□□□□□ -0.12
NUP188-211ENST00000550219 NCAPHQ15003 741 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms