RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 PJA1Q8NG27 643 aa18.31■□□□□ 0.52
CHMP1A-208ENST00000550102 GBP4Q96PP9 640 aa18.31■□□□□ 0.52
CHMP1A-208ENST00000550102 CLSTN2Q9H4D0 955 aa18.31■□□□□ 0.52
CHMP1A-208ENST00000550102 KIF9Q9HAQ2 790 aa18.31■□□□□ 0.52
CHMP1A-208ENST00000550102 TRPC7Q9HCX4 862 aa18.31■□□□□ 0.52
CHMP1A-208ENST00000550102 TRPV5Q9NQA5 729 aa18.31■□□□□ 0.52
CHMP1A-208ENST00000550102 HEBP1Q9NRV9 189 aa18.31■□□□□ 0.52
CHMP1A-208ENST00000550102 FAM49BQ9NUQ9 324 aa18.31■□□□□ 0.52
CHMP1A-208ENST00000550102 TRAV19A0A0A6YYK7 116 aa18.3■□□□□ 0.52
CHMP1A-208ENST00000550102 CHADO15335 359 aa18.3■□□□□ 0.52
CHMP1A-208ENST00000550102 GALR2O43603 387 aaPredicted RBP18.3■□□□□ 0.52
CHMP1A-208ENST00000550102 CCDC130P13994 396 aa18.3■□□□□ 0.52
CHMP1A-208ENST00000550102 CD58P19256 250 aa18.3■□□□□ 0.52
CHMP1A-208ENST00000550102 PTPN5P54829 565 aa18.3■□□□□ 0.52
CHMP1A-208ENST00000550102 ARHGAP29Q52LW3 1261 aa18.3■□□□□ 0.52
CHMP1A-208ENST00000550102 FUKQ8N0W3 1084 aa18.3■□□□□ 0.52
CHMP1A-208ENST00000550102 CRYBG2Q8N1P7 616 aa18.3■□□□□ 0.52
CHMP1A-208ENST00000550102 TTC39CQ8N584 583 aa18.3■□□□□ 0.52
CHMP1A-208ENST00000550102 CELF5Q8N6W0 485 aaKnown RBP18.3■□□□□ 0.52
CHMP1A-208ENST00000550102 BPIFB1Q8TDL5 484 aa18.3■□□□□ 0.52
CHMP1A-208ENST00000550102 DDX23Q9BUQ8 820 aaKnown RBP18.3■□□□□ 0.52
CHMP1A-208ENST00000550102 NT5C1AQ9BXI3 368 aa18.3■□□□□ 0.52
CHMP1A-208ENST00000550102 FOXQ1Q9C009 403 aa18.3■□□□□ 0.52
CHMP1A-208ENST00000550102 SMG9Q9H0W8 520 aaKnown RBP18.3■□□□□ 0.52
CHMP1A-208ENST00000550102 FAM124BQ9H5Z6 455 aaPredicted RBP18.3■□□□□ 0.52
CHMP1A-208ENST00000550102 COQ4Q9Y3A0 265 aa18.3■□□□□ 0.52
CHMP1A-208ENST00000550102 KANSL1LA0AUZ9 987 aa18.29■□□□□ 0.52
CHMP1A-208ENST00000550102 PI15O43692 258 aa18.29■□□□□ 0.52
CHMP1A-208ENST00000550102 LRRN2O75325 713 aa18.29■□□□□ 0.52
CHMP1A-208ENST00000550102 CILPO75339 1184 aa18.29■□□□□ 0.52
CHMP1A-208ENST00000550102 AP1G2O75843 785 aa18.29■□□□□ 0.52
CHMP1A-208ENST00000550102 RTN3O95197 1032 aaPredicted RBP18.29■□□□□ 0.52
CHMP1A-208ENST00000550102 GNA14O95837 355 aa18.29■□□□□ 0.52
CHMP1A-208ENST00000550102 CKMP06732 381 aa18.29■□□□□ 0.52
CHMP1A-208ENST00000550102 FMO5P49326 533 aa18.29■□□□□ 0.52
CHMP1A-208ENST00000550102 PDE6CP51160 858 aa18.29■□□□□ 0.52
CHMP1A-208ENST00000550102 STX17P56962 302 aa18.29■□□□□ 0.52
CHMP1A-208ENST00000550102 USP46P62068 366 aa18.29■□□□□ 0.52
CHMP1A-208ENST00000550102 GPIHBP1Q8IV16 184 aa18.29■□□□□ 0.52
CHMP1A-208ENST00000550102 CCDC105Q8IYK2 499 aa18.29■□□□□ 0.52
CHMP1A-208ENST00000550102 SLC2A14Q8TDB8 520 aa18.29■□□□□ 0.52
CHMP1A-208ENST00000550102 CSGALNACT1Q8TDX6 532 aa18.29■□□□□ 0.52
CHMP1A-208ENST00000550102 SLITRK1Q96PX8 696 aa18.29■□□□□ 0.52
CHMP1A-208ENST00000550102 NUP62CLQ9H1M0 184 aa18.29■□□□□ 0.52
CHMP1A-208ENST00000550102 TDP1Q9NUW8 608 aa18.29■□□□□ 0.52
CHMP1A-208ENST00000550102 TRPM5Q9NZQ8 1165 aa18.29■□□□□ 0.52
CHMP1A-208ENST00000550102 SIT1Q9Y3P8 196 aa18.29■□□□□ 0.52
CHMP1A-208ENST00000550102 PIEZO1Q92508 2521 aa18.29■□□□□ 0.52
CHMP1A-208ENST00000550102 ARNTLO00327 626 aa18.28■□□□□ 0.52
CHMP1A-208ENST00000550102 FGFR1OPO95684 399 aaKnown RBP18.28■□□□□ 0.52
CHMP1A-208ENST00000550102 USP17L7P0C7H9 530 aa18.28■□□□□ 0.52
CHMP1A-208ENST00000550102 PPP3CCP48454 512 aa18.28■□□□□ 0.52
CHMP1A-208ENST00000550102 PLCB2Q00722 1185 aa18.28■□□□□ 0.52
CHMP1A-208ENST00000550102 ZNF268Q14587 947 aaPredicted RBP18.28■□□□□ 0.52
CHMP1A-208ENST00000550102 UBXN2BQ14CS0 331 aa18.28■□□□□ 0.52
CHMP1A-208ENST00000550102 ZNF852Q6ZMS4 543 aa18.28■□□□□ 0.52
CHMP1A-208ENST00000550102 PAQR9Q6ZVX9 377 aa18.28■□□□□ 0.52
CHMP1A-208ENST00000550102 NUP93Q8N1F7 819 aa18.28■□□□□ 0.52
CHMP1A-208ENST00000550102 C12orf29Q8N999 325 aa18.28■□□□□ 0.52
CHMP1A-208ENST00000550102 USP13Q92995 863 aaPredicted RBP18.28■□□□□ 0.52
CHMP1A-208ENST00000550102 LRRC3BQ96PB8 259 aa18.28■□□□□ 0.52
CHMP1A-208ENST00000550102 TWNKQ96RR1 684 aa18.28■□□□□ 0.52
CHMP1A-208ENST00000550102 ARID3AQ99856 593 aa18.28■□□□□ 0.52
CHMP1A-208ENST00000550102 CISHQ9NSE2 258 aa18.28■□□□□ 0.52
CHMP1A-208ENST00000550102 THG1LQ9NWX6 298 aaKnown RBP18.28■□□□□ 0.52
CHMP1A-208ENST00000550102 RWDD2AQ9UIY3 292 aa18.28■□□□□ 0.52
CHMP1A-208ENST00000550102 CCL26Q9Y258 94 aa18.28■□□□□ 0.52
CHMP1A-208ENST00000550102 MRPS17Q9Y2R5 130 aaKnown RBP18.28■□□□□ 0.52
CHMP1A-208ENST00000550102 PIAS3Q9Y6X2 628 aa18.28■□□□□ 0.52
CHMP1A-208ENST00000550102 FAM200BP0CF97 657 aa18.27■□□□□ 0.52
CHMP1A-208ENST00000550102 GLULP15104 373 aa18.27■□□□□ 0.52
CHMP1A-208ENST00000550102 PFKLP17858 780 aa18.27■□□□□ 0.52
CHMP1A-208ENST00000550102 IFRD2Q12894 506 aaPredicted RBP18.27■□□□□ 0.52
CHMP1A-208ENST00000550102 DTWD2Q8NBA8 298 aa18.27■□□□□ 0.52
CHMP1A-208ENST00000550102 PDZD8Q8NEN9 1154 aa18.27■□□□□ 0.52
CHMP1A-208ENST00000550102 MSANTD3Q96H12 275 aa18.27■□□□□ 0.52
CHMP1A-208ENST00000550102 IPO9Q96P70 1041 aaKnown RBP18.27■□□□□ 0.52
CHMP1A-208ENST00000550102 KCNK16Q96T55 309 aa18.27■□□□□ 0.52
CHMP1A-208ENST00000550102 OSBPL6Q9BZF3 934 aa18.27■□□□□ 0.52
CHMP1A-208ENST00000550102 IRF2BPLQ9H1B7 796 aa18.27■□□□□ 0.52
CHMP1A-208ENST00000550102 LTB4R2Q9NPC1 389 aa18.27■□□□□ 0.52
CHMP1A-208ENST00000550102 C2orf78A6NCI8 922 aa18.26■□□□□ 0.51
CHMP1A-208ENST00000550102 MAN2B1O00754 1011 aa18.26■□□□□ 0.51
CHMP1A-208ENST00000550102 PMM2O15305 246 aa18.26■□□□□ 0.51
CHMP1A-208ENST00000550102 DCNP07585 359 aaKnown RBP18.26■□□□□ 0.51
CHMP1A-208ENST00000550102 YWHAQP27348 245 aa18.26■□□□□ 0.51
CHMP1A-208ENST00000550102 ADORA2BP29275 332 aa18.26■□□□□ 0.51
CHMP1A-208ENST00000550102 SLC5A3P53794 718 aa18.26■□□□□ 0.51
CHMP1A-208ENST00000550102 MARSP56192 900 aaKnown RBP18.26■□□□□ 0.51
CHMP1A-208ENST00000550102 YWHAEP62258 255 aaKnown RBP18.26■□□□□ 0.51
CHMP1A-208ENST00000550102 NHLH1Q02575 133 aa18.26■□□□□ 0.51
CHMP1A-208ENST00000550102 CETN1Q12798 172 aa18.26■□□□□ 0.51
CHMP1A-208ENST00000550102 TCF15Q12870 199 aa18.26■□□□□ 0.51
CHMP1A-208ENST00000550102 TAF10Q12962 218 aa18.26■□□□□ 0.51
CHMP1A-208ENST00000550102 USP4Q13107 963 aa18.26■□□□□ 0.51
CHMP1A-208ENST00000550102 CUL2Q13617 745 aa18.26■□□□□ 0.51
CHMP1A-208ENST00000550102 TRIM59Q8IWR1 403 aa18.26■□□□□ 0.51
CHMP1A-208ENST00000550102 MLKLQ8NB16 471 aa18.26■□□□□ 0.51
CHMP1A-208ENST00000550102 WHAMMQ8TF30 809 aa18.26■□□□□ 0.51
CHMP1A-208ENST00000550102 OVCA2Q8WZ82 227 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms