RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 CLCN5P51795 746 aa16.75■□□□□ 0.27
DDX54-205ENST00000548786 MAP3K7CLP57077 242 aa16.75■□□□□ 0.27
DDX54-205ENST00000548786 INCA1Q0VD86 236 aa16.75■□□□□ 0.27
DDX54-205ENST00000548786 MON1AQ86VX9 555 aa16.75■□□□□ 0.27
DDX54-205ENST00000548786 UNC93AQ86WB7 457 aa16.75■□□□□ 0.27
DDX54-205ENST00000548786 WHAMMQ8TF30 809 aa16.75■□□□□ 0.27
DDX54-205ENST00000548786 USP13Q92995 863 aaPredicted RBP16.75■□□□□ 0.27
DDX54-205ENST00000548786 SMARCD1Q96GM5 515 aa16.75■□□□□ 0.27
DDX54-205ENST00000548786 GBP4Q96PP9 640 aa16.75■□□□□ 0.27
DDX54-205ENST00000548786 NT5C1AQ9BXI3 368 aa16.75■□□□□ 0.27
DDX54-205ENST00000548786 CYP3A43Q9HB55 503 aa16.75■□□□□ 0.27
DDX54-205ENST00000548786 DMAP1Q9NPF5 467 aaPredicted RBP16.75■□□□□ 0.27
DDX54-205ENST00000548786 CISHQ9NSE2 258 aa16.75■□□□□ 0.27
DDX54-205ENST00000548786 MTF2Q9Y483 593 aaPredicted RBP16.75■□□□□ 0.27
DDX54-205ENST00000548786 CILPO75339 1184 aa16.74■□□□□ 0.27
DDX54-205ENST00000548786 BEST1O76090 585 aa16.74■□□□□ 0.27
DDX54-205ENST00000548786 DDX6P26196 483 aaKnown RBP eCLIP16.74■□□□□ 0.27
DDX54-205ENST00000548786 SOX9P48436 509 aa16.74■□□□□ 0.27
DDX54-205ENST00000548786 MCCD1P59942 119 aaPredicted RBP16.74■□□□□ 0.27
DDX54-205ENST00000548786 TAF10Q12962 218 aa16.74■□□□□ 0.27
DDX54-205ENST00000548786 CLEC17AQ6ZS10 378 aa16.74■□□□□ 0.27
DDX54-205ENST00000548786 CRYBG2Q8N1P7 616 aa16.74■□□□□ 0.27
DDX54-205ENST00000548786 CELF5Q8N6W0 485 aaKnown RBP16.74■□□□□ 0.27
DDX54-205ENST00000548786 ARL14EPQ8N8R7 260 aaPredicted RBP16.74■□□□□ 0.27
DDX54-205ENST00000548786 SCAMP5Q8TAC9 235 aa16.74■□□□□ 0.27
DDX54-205ENST00000548786 RIN3Q8TB24 985 aa16.74■□□□□ 0.27
DDX54-205ENST00000548786 BPIFB1Q8TDL5 484 aa16.74■□□□□ 0.27
DDX54-205ENST00000548786 IRF7Q92985 503 aa16.74■□□□□ 0.27
DDX54-205ENST00000548786 E2F7Q96AV8 911 aa16.74■□□□□ 0.27
DDX54-205ENST00000548786 SHDQ96IW2 340 aa16.74■□□□□ 0.27
DDX54-205ENST00000548786 SMOQ99835 787 aa16.74■□□□□ 0.27
DDX54-205ENST00000548786 TRPM5Q9NZQ8 1165 aa16.74■□□□□ 0.27
DDX54-205ENST00000548786 NDRG2Q9UN36 371 aaKnown RBP16.74■□□□□ 0.27
DDX54-205ENST00000548786 ZNF638Q14966 1978 aaKnown RBP16.74■□□□□ 0.27
DDX54-205ENST00000548786 TRAV19A0A0A6YYK7 116 aa16.73■□□□□ 0.27
DDX54-205ENST00000548786 TRIM21P19474 475 aaKnown RBP16.73■□□□□ 0.27
DDX54-205ENST00000548786 SLC5A3P53794 718 aa16.73■□□□□ 0.27
DDX54-205ENST00000548786 STARD6P59095 220 aa16.73■□□□□ 0.27
DDX54-205ENST00000548786 TNK2Q07912 1038 aa16.73■□□□□ 0.27
DDX54-205ENST00000548786 FCHO2Q0JRZ9 810 aa16.73■□□□□ 0.27
DDX54-205ENST00000548786 DPCR1Q3MIW9 517 aa16.73■□□□□ 0.27
DDX54-205ENST00000548786 NUP93Q8N1F7 819 aa16.73■□□□□ 0.27
DDX54-205ENST00000548786 PJA1Q8NG27 643 aa16.73■□□□□ 0.27
DDX54-205ENST00000548786 CSGALNACT1Q8TDX6 532 aa16.73■□□□□ 0.27
DDX54-205ENST00000548786 DNASE1L2Q92874 299 aa16.73■□□□□ 0.27
DDX54-205ENST00000548786 FBXO32Q969P5 355 aa16.73■□□□□ 0.27
DDX54-205ENST00000548786 CYFIP2Q96F07 1278 aa16.73■□□□□ 0.27
DDX54-205ENST00000548786 HEXIM2Q96MH2 286 aaKnown RBP16.73■□□□□ 0.27
DDX54-205ENST00000548786 MED15Q96RN5 788 aa16.73■□□□□ 0.27
DDX54-205ENST00000548786 TDP1Q9NUW8 608 aa16.73■□□□□ 0.27
DDX54-205ENST00000548786 RWDD2AQ9UIY3 292 aa16.73■□□□□ 0.27
DDX54-205ENST00000548786 SIT1Q9Y3P8 196 aa16.73■□□□□ 0.27
DDX54-205ENST00000548786 PIAS3Q9Y6X2 628 aa16.73■□□□□ 0.27
DDX54-205ENST00000548786 MYH10P35580 1976 aa16.73■□□□□ 0.27
DDX54-205ENST00000548786 COL4A2P08572 1712 aa16.73■□□□□ 0.27
DDX54-205ENST00000548786 KANSL1LA0AUZ9 987 aa16.72■□□□□ 0.27
DDX54-205ENST00000548786 H0Y858 1186 aa16.72■□□□□ 0.27
DDX54-205ENST00000548786 FAM200BP0CF97 657 aa16.72■□□□□ 0.27
DDX54-205ENST00000548786 YWHAQP27348 245 aa16.72■□□□□ 0.27
DDX54-205ENST00000548786 KPNA1P52294 538 aaPredicted RBP16.72■□□□□ 0.27
DDX54-205ENST00000548786 PRKCQQ04759 706 aa16.72■□□□□ 0.27
DDX54-205ENST00000548786 TCF15Q12870 199 aa16.72■□□□□ 0.27
DDX54-205ENST00000548786 CUL2Q13617 745 aa16.72■□□□□ 0.27
DDX54-205ENST00000548786 TRIM68Q6AZZ1 485 aa16.72■□□□□ 0.27
DDX54-205ENST00000548786 PHLDB3Q6NSJ2 640 aa16.72■□□□□ 0.27
DDX54-205ENST00000548786 GPRIN1Q7Z2K8 1008 aa16.72■□□□□ 0.27
DDX54-205ENST00000548786 ZMIZ2Q8NF64 920 aa16.72■□□□□ 0.27
DDX54-205ENST00000548786 GPT2Q8TD30 523 aa16.72■□□□□ 0.27
DDX54-205ENST00000548786 FAM122AQ96E09 287 aa16.72■□□□□ 0.27
DDX54-205ENST00000548786 SLITRK1Q96PX8 696 aa16.72■□□□□ 0.27
DDX54-205ENST00000548786 TTLL2Q9BWV7 592 aa16.72■□□□□ 0.27
DDX54-205ENST00000548786 FAM86C1Q9NVL1 165 aa16.72■□□□□ 0.27
DDX54-205ENST00000548786 GTSE1Q9NYZ3 720 aa16.72■□□□□ 0.27
DDX54-205ENST00000548786 COQ4Q9Y3A0 265 aa16.72■□□□□ 0.27
DDX54-205ENST00000548786 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.72■□□□□ 0.27
DDX54-205ENST00000548786 ANAPC1Q9H1A4 1944 aa16.72■□□□□ 0.27
DDX54-205ENST00000548786 ZNF840PA6NDX5 716 aa16.71■□□□□ 0.27
DDX54-205ENST00000548786 FAM170BA6NMN3 283 aa16.71■□□□□ 0.27
DDX54-205ENST00000548786 ARNTLO00327 626 aa16.71■□□□□ 0.27
DDX54-205ENST00000548786 SCAMP3O14828 347 aaKnown RBP16.71■□□□□ 0.27
DDX54-205ENST00000548786 CHADO15335 359 aa16.71■□□□□ 0.27
DDX54-205ENST00000548786 GALR2O43603 387 aaPredicted RBP16.71■□□□□ 0.27
DDX54-205ENST00000548786 USP17L7P0C7H9 530 aa16.71■□□□□ 0.27
DDX54-205ENST00000548786 GLULP15104 373 aa16.71■□□□□ 0.27
DDX54-205ENST00000548786 HDCP19113 662 aa16.71■□□□□ 0.27
DDX54-205ENST00000548786 TARSP26639 723 aaKnown RBP16.71■□□□□ 0.27
DDX54-205ENST00000548786 RAD23BP54727 409 aa16.71■□□□□ 0.27
DDX54-205ENST00000548786 KCNH2Q12809 1159 aa16.71■□□□□ 0.27
DDX54-205ENST00000548786 TPD52L1Q16890 204 aaPredicted RBP16.71■□□□□ 0.27
DDX54-205ENST00000548786 HSP90AA4PQ58FG1 418 aa16.71■□□□□ 0.27
DDX54-205ENST00000548786 PPP1R26Q5T8A7 1209 aaPredicted RBP16.71■□□□□ 0.27
DDX54-205ENST00000548786 ZNF852Q6ZMS4 543 aa16.71■□□□□ 0.27
DDX54-205ENST00000548786 TRIM59Q8IWR1 403 aa16.71■□□□□ 0.27
DDX54-205ENST00000548786 CCDC105Q8IYK2 499 aa16.71■□□□□ 0.27
DDX54-205ENST00000548786 MLKLQ8NB16 471 aa16.71■□□□□ 0.27
DDX54-205ENST00000548786 DTWD2Q8NBA8 298 aa16.71■□□□□ 0.27
DDX54-205ENST00000548786 SLC4A11Q8NBS3 891 aa16.71■□□□□ 0.27
DDX54-205ENST00000548786 KAT5Q92993 513 aa16.71■□□□□ 0.27
DDX54-205ENST00000548786 CNOT6LQ96LI5 555 aaKnown RBP16.71■□□□□ 0.27
DDX54-205ENST00000548786 HNRNPABQ99729 332 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms