RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 RNF217Q8TC41 542 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 ACMSDQ8TDX5 336 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 PPP4R1Q8TF05 950 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 FNIP1Q8TF40 1166 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 KRT35Q92764 455 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 EZH1Q92800 747 aaPredicted RBP6.09□□□□□ -1.43
CHD4-206ENST00000536999 SLC7A6OSQ96CW6 309 aaPredicted RBP6.09□□□□□ -1.43
CHD4-206ENST00000536999 ARHGEF26Q96DR7 871 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 RMDN2Q96LZ7 410 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 LRGUKQ96M69 825 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 KCNK16Q96T55 309 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 NTPCRQ9BSD7 190 aaKnown RBP6.09□□□□□ -1.43
CHD4-206ENST00000536999 ZNF577Q9BSK1 485 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 NAT9Q9BTE0 207 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 SPATA16Q9BXB7 569 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 GPR88Q9GZN0 384 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 CRISPLD2Q9H0B8 497 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 TTYH1Q9H313 450 aaPredicted RBP6.09□□□□□ -1.43
CHD4-206ENST00000536999 VPS37BQ9H9H4 285 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 ARHGEF10LQ9HCE6 1279 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 ERVK-5Q9HDB9 667 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 SAYSD1Q9NPB0 183 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 PAK6Q9NQU5 681 aaPredicted RBP6.09□□□□□ -1.43
CHD4-206ENST00000536999 C8orf4Q9NR00 106 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 CYP26B1Q9NR63 512 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 NMRK1Q9NWW6 199 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 PTTG2Q9NZH5 202 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 SAP30BPQ9UHR5 308 aaKnown RBP6.09□□□□□ -1.43
CHD4-206ENST00000536999 TAGLN3Q9UI15 199 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 CPA4Q9UI42 421 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 MID2Q9UJV3 735 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 PADI4Q9UM07 663 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 SOX13Q9UN79 622 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 COG5Q9UP83 839 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 PPME1Q9Y570 386 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 PPP2R3BQ9Y5P8 575 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 SQORQ9Y6N5 450 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 ZDBF2Q9HCK1 2354 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 SSC5DA1L4H1 1573 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 MYH1P12882 1939 aa6.09□□□□□ -1.44
CHD4-206ENST00000536999 LRRC37AA6NMS7 1700 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 FRMPD2Q68DX3 1309 aaPredicted RBP6.08□□□□□ -1.44
CHD4-206ENST00000536999 TMEM110-MUSTN1A8MSY1 372 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 USP17L10C9JJH3 530 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 E7ESA3 106 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 F5H6K3 240 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 H0YJX3 145 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 MEIS1O00470 390 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 MED7O43513 233 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 LIASO43766 372 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 LPXNO60711 386 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 CLASP2O75122 1294 aaKnown RBP6.08□□□□□ -1.44
CHD4-206ENST00000536999 PSMD10O75832 226 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 RNF8O76064 485 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 SERPINA6P08185 405 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 SNRPAP09012 282 aaKnown RBP6.08□□□□□ -1.44
CHD4-206ENST00000536999 CETPP11597 493 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 BMP3P12645 472 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 UNGP13051 313 aaPredicted RBP6.08□□□□□ -1.44
CHD4-206ENST00000536999 AOC1P19801 751 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 IBSPP21815 317 aaPredicted RBP6.08□□□□□ -1.44
CHD4-206ENST00000536999 KLRC2P26717 231 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 TTKP33981 857 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 RPL5P46777 297 aaKnown RBP6.08□□□□□ -1.44
CHD4-206ENST00000536999 QARSP47897 775 aaKnown RBP6.08□□□□□ -1.44
CHD4-206ENST00000536999 CASP4P49662 377 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 ARSEP51690 589 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 CASP5P51878 434 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 VCPP55072 806 aaKnown RBP6.08□□□□□ -1.44
CHD4-206ENST00000536999 WDR4P57081 412 aaKnown RBP6.08□□□□□ -1.44
CHD4-206ENST00000536999 FMO1Q01740 532 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 SLC18A2Q05940 514 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 WASHC5Q12768 1159 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 IKQ13123 557 aaPredicted RBP6.08□□□□□ -1.44
CHD4-206ENST00000536999 SPIDRQ14159 915 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 SNRNP35Q16560 246 aaKnown RBP6.08□□□□□ -1.44
CHD4-206ENST00000536999 UBE2SQ16763 222 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 P3H1Q32P28 736 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 CBWD6Q4V339 395 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 FAM47CQ5HY64 1035 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 CBWD3Q5JTY5 395 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 CBWD5Q5RIA9 395 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 RARS2Q5T160 578 aaKnown RBP6.08□□□□□ -1.44
CHD4-206ENST00000536999 ZFYVE27Q5T4F4 411 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 TEDDM1Q5T9Z0 273 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 THEMIS2Q5TEJ8 643 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 TTC39BQ5VTQ0 682 aaPredicted RBP6.08□□□□□ -1.44
CHD4-206ENST00000536999 LVRNQ6Q4G3 990 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 PADI6Q6TGC4 694 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 C3orf62Q6ZUJ4 267 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 MARK2Q7KZI7 788 aaKnown RBP6.08□□□□□ -1.44
CHD4-206ENST00000536999 OTOAQ7RTW8 1153 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 SLC26A11Q86WA9 606 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 RASSF3Q86WH2 238 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 LRRC6Q86X45 466 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 C4orf19Q8IY42 314 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 SPICE1Q8N0Z3 855 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 EFCAB3Q8N7B9 438 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 NIPA2Q8N8Q9 360 aa6.08□□□□□ -1.44
CHD4-206ENST00000536999 TMEM35BQ8NCS4 154 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms