RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 CYP2J2P51589 502 aa21.01■□□□□ 0.95
TNFRSF1B-204ENST00000536782 CYP24A1Q07973 514 aa21.01■□□□□ 0.95
TNFRSF1B-204ENST00000536782 NR1H3Q13133 447 aa21.01■□□□□ 0.95
TNFRSF1B-204ENST00000536782 PSMD6Q15008 389 aa21.01■□□□□ 0.95
TNFRSF1B-204ENST00000536782 EML3Q32P44 896 aa21.01■□□□□ 0.95
TNFRSF1B-204ENST00000536782 UNC13DQ70J99 1090 aa21.01■□□□□ 0.95
TNFRSF1B-204ENST00000536782 HS2ST1Q7LGA3 356 aa21.01■□□□□ 0.95
TNFRSF1B-204ENST00000536782 CAMKK1Q8N5S9 505 aa21.01■□□□□ 0.95
TNFRSF1B-204ENST00000536782 XXYLT1Q8NBI6 393 aa21.01■□□□□ 0.95
TNFRSF1B-204ENST00000536782 SCFD1Q8WVM8 642 aa21.01■□□□□ 0.95
TNFRSF1B-204ENST00000536782 CD101Q93033 1021 aa21.01■□□□□ 0.95
TNFRSF1B-204ENST00000536782 CCDC127Q96BQ5 260 aa21.01■□□□□ 0.95
TNFRSF1B-204ENST00000536782 CGRRF1Q99675 332 aa21.01■□□□□ 0.95
TNFRSF1B-204ENST00000536782 MRPL45Q9BRJ2 306 aaKnown RBP21.01■□□□□ 0.95
TNFRSF1B-204ENST00000536782 TRPM5Q9NZQ8 1165 aa21.01■□□□□ 0.95
TNFRSF1B-204ENST00000536782 ARHGAP26Q9UNA1 814 aa21.01■□□□□ 0.95
TNFRSF1B-204ENST00000536782 SLC30A4O14863 429 aa21■□□□□ 0.95
TNFRSF1B-204ENST00000536782 POLR2DO15514 142 aaKnown RBP21■□□□□ 0.95
TNFRSF1B-204ENST00000536782 TACC1O75410 805 aa21■□□□□ 0.95
TNFRSF1B-204ENST00000536782 FAM163BP0C2L3 166 aa21■□□□□ 0.95
TNFRSF1B-204ENST00000536782 CCDC192P0DO97 292 aa21■□□□□ 0.95
TNFRSF1B-204ENST00000536782 PFKLP17858 780 aa21■□□□□ 0.95
TNFRSF1B-204ENST00000536782 USP46P62068 366 aa21■□□□□ 0.95
TNFRSF1B-204ENST00000536782 EHHADHQ08426 723 aa21■□□□□ 0.95
TNFRSF1B-204ENST00000536782 MDH1BQ5I0G3 518 aa21■□□□□ 0.95
TNFRSF1B-204ENST00000536782 FOXD4L5Q5VV16 416 aaPredicted RBP21■□□□□ 0.95
TNFRSF1B-204ENST00000536782 NAIF1Q69YI7 327 aaPredicted RBP21■□□□□ 0.95
TNFRSF1B-204ENST00000536782 CACNA2D4Q7Z3S7 1137 aa21■□□□□ 0.95
TNFRSF1B-204ENST00000536782 OR6B3Q8NGW1 331 aa21■□□□□ 0.95
TNFRSF1B-204ENST00000536782 FOXD4L4Q8WXT5 416 aaPredicted RBP21■□□□□ 0.95
TNFRSF1B-204ENST00000536782 LOXL4Q96JB6 756 aa21■□□□□ 0.95
TNFRSF1B-204ENST00000536782 PDIA4P13667 645 aaKnown RBP20.99■□□□□ 0.95
TNFRSF1B-204ENST00000536782 PPP3CCP48454 512 aa20.99■□□□□ 0.95
TNFRSF1B-204ENST00000536782 TNNC1P63316 161 aa20.99■□□□□ 0.95
TNFRSF1B-204ENST00000536782 WDR72Q3MJ13 1102 aa20.99■□□□□ 0.95
TNFRSF1B-204ENST00000536782 RPLP0P6Q8NHW5 317 aa20.99■□□□□ 0.95
TNFRSF1B-204ENST00000536782 C8orf48Q96LL4 319 aa20.99■□□□□ 0.95
TNFRSF1B-204ENST00000536782 TTLL2Q9BWV7 592 aa20.99■□□□□ 0.95
TNFRSF1B-204ENST00000536782 BLZF1Q9H2G9 400 aa20.99■□□□□ 0.95
TNFRSF1B-204ENST00000536782 LINC00597Q9H2U6 94 aa20.99■□□□□ 0.95
TNFRSF1B-204ENST00000536782 CGNQ9P2M7 1197 aaKnown RBP20.99■□□□□ 0.95
TNFRSF1B-204ENST00000536782 PTPRDP23468 1912 aa20.99■□□□□ 0.95
TNFRSF1B-204ENST00000536782 F8VP50 259 aa20.98■□□□□ 0.95
TNFRSF1B-204ENST00000536782 AXIN1O15169 862 aa20.98■□□□□ 0.95
TNFRSF1B-204ENST00000536782 AKAP3O75969 853 aa20.98■□□□□ 0.95
TNFRSF1B-204ENST00000536782 NFATC1O95644 943 aa20.98■□□□□ 0.95
TNFRSF1B-204ENST00000536782 PTPN1P18031 435 aaKnown RBP20.98■□□□□ 0.95
TNFRSF1B-204ENST00000536782 CASP1P29466 404 aa20.98■□□□□ 0.95
TNFRSF1B-204ENST00000536782 NOP14P78316 857 aaKnown RBP20.98■□□□□ 0.95
TNFRSF1B-204ENST00000536782 PSMD2Q13200 908 aa20.98■□□□□ 0.95
TNFRSF1B-204ENST00000536782 TRPC3Q13507 836 aa20.98■□□□□ 0.95
TNFRSF1B-204ENST00000536782 SYT13Q7L8C5 426 aa20.98■□□□□ 0.95
TNFRSF1B-204ENST00000536782 KBTBD6Q86V97 674 aa20.98■□□□□ 0.95
TNFRSF1B-204ENST00000536782 CCDC26Q8TAB7 109 aa20.98■□□□□ 0.95
TNFRSF1B-204ENST00000536782 EZH1Q92800 747 aaPredicted RBP20.98■□□□□ 0.95
TNFRSF1B-204ENST00000536782 ACDQ96AP0 544 aa20.98■□□□□ 0.95
TNFRSF1B-204ENST00000536782 ARRDC1-AS1Q9H2J1 176 aa20.98■□□□□ 0.95
TNFRSF1B-204ENST00000536782 SLC39A2Q9NP94 309 aa20.98■□□□□ 0.95
TNFRSF1B-204ENST00000536782 POLR3BQ9NW08 1133 aaPredicted RBP20.98■□□□□ 0.95
TNFRSF1B-204ENST00000536782 FAM13BQ9NYF5 915 aa20.98■□□□□ 0.95
TNFRSF1B-204ENST00000536782 NME7Q9Y5B8 376 aa20.98■□□□□ 0.95
TNFRSF1B-204ENST00000536782 HELZP42694 1942 aaKnown RBP20.98■□□□□ 0.95
TNFRSF1B-204ENST00000536782 USP24Q9UPU5 2620 aa20.97■□□□□ 0.95
TNFRSF1B-204ENST00000536782 PVALEFA0A1B0GWK0 134 aa20.97■□□□□ 0.95
TNFRSF1B-204ENST00000536782 GDF9O60383 454 aa20.97■□□□□ 0.95
TNFRSF1B-204ENST00000536782 STAU1O95793 577 aaKnown RBP20.97■□□□□ 0.95
TNFRSF1B-204ENST00000536782 RAP1GAPP47736 663 aa20.97■□□□□ 0.95
TNFRSF1B-204ENST00000536782 BMT2Q1RMZ1 405 aa20.97■□□□□ 0.95
TNFRSF1B-204ENST00000536782 FOXD4L6Q3SYB3 417 aaPredicted RBP20.97■□□□□ 0.95
TNFRSF1B-204ENST00000536782 FOXD4L3Q6VB84 417 aaPredicted RBP20.97■□□□□ 0.95
TNFRSF1B-204ENST00000536782 C12orf56Q8IXR9 622 aa20.97■□□□□ 0.95
TNFRSF1B-204ENST00000536782 ZNF516Q92618 1163 aa20.97■□□□□ 0.95
TNFRSF1B-204ENST00000536782 SNX21Q969T3 373 aa20.97■□□□□ 0.95
TNFRSF1B-204ENST00000536782 HHIPQ96QV1 700 aa20.97■□□□□ 0.95
TNFRSF1B-204ENST00000536782 ELOVL4Q9GZR5 314 aa20.97■□□□□ 0.95
TNFRSF1B-204ENST00000536782 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.96■□□□□ 0.95
TNFRSF1B-204ENST00000536782 ZNF840PA6NDX5 716 aa20.96■□□□□ 0.95
TNFRSF1B-204ENST00000536782 A8MXQ7 604 aa20.96■□□□□ 0.95
TNFRSF1B-204ENST00000536782 LEFTY2O00292 366 aa20.96■□□□□ 0.95
TNFRSF1B-204ENST00000536782 EXOC3O60645 756 aa20.96■□□□□ 0.95
TNFRSF1B-204ENST00000536782 EPN2O95208 641 aa20.96■□□□□ 0.95
TNFRSF1B-204ENST00000536782 ZSCAN22P10073 491 aaPredicted RBP20.96■□□□□ 0.95
TNFRSF1B-204ENST00000536782 ATICP31939 592 aa20.96■□□□□ 0.95
TNFRSF1B-204ENST00000536782 AFMP43652 599 aa20.96■□□□□ 0.95
TNFRSF1B-204ENST00000536782 ME1P48163 572 aa20.96■□□□□ 0.95
TNFRSF1B-204ENST00000536782 MYL6P60660 151 aa20.96■□□□□ 0.95
TNFRSF1B-204ENST00000536782 SLC7A9P82251 487 aa20.96■□□□□ 0.95
TNFRSF1B-204ENST00000536782 ZXDBP98169 803 aa20.96■□□□□ 0.95
TNFRSF1B-204ENST00000536782 DMC1Q14565 340 aa20.96■□□□□ 0.95
TNFRSF1B-204ENST00000536782 KNOP1Q1ED39 458 aaKnown RBP20.96■□□□□ 0.95
TNFRSF1B-204ENST00000536782 AASDHQ4L235 1098 aaPredicted RBP20.96■□□□□ 0.95
TNFRSF1B-204ENST00000536782 TDRD10Q5VZ19 366 aaKnown RBP20.96■□□□□ 0.95
TNFRSF1B-204ENST00000536782 SYAP1Q96A49 352 aaPredicted RBP20.96■□□□□ 0.95
TNFRSF1B-204ENST00000536782 CNTNAP3BQ96NU0 1288 aa20.96■□□□□ 0.95
TNFRSF1B-204ENST00000536782 CNTNAP3Q9BZ76 1288 aa20.96■□□□□ 0.95
TNFRSF1B-204ENST00000536782 DPEP3Q9H4B8 488 aa20.96■□□□□ 0.95
TNFRSF1B-204ENST00000536782 NXF1Q9UBU9 619 aaKnown RBP20.96■□□□□ 0.95
TNFRSF1B-204ENST00000536782 PCDHA7Q9UN72 937 aa20.96■□□□□ 0.95
TNFRSF1B-204ENST00000536782 PHACTR2O75167 634 aa20.95■□□□□ 0.94
TNFRSF1B-204ENST00000536782 F13A1P00488 732 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms