RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 DDIT4Q9NX09 232 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 TIMM13Q9Y5L4 95 aaPredicted RBP13.09□□□□□ -0.31
SPG11-203ENST00000535302 DUSP10Q9Y6W6 482 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 IGSF9BQ9UPX0 1349 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 M0R3G1 203 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 ALDH1A2O94788 518 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 FYNP06241 537 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 ALOX15P16050 662 aaPredicted RBP13.09□□□□□ -0.31
SPG11-203ENST00000535302 CD44P16070 742 aaKnown RBP13.09□□□□□ -0.31
SPG11-203ENST00000535302 MICU2Q8IYU8 434 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 DCP1BQ8IZD4 617 aaKnown RBP13.09□□□□□ -0.31
SPG11-203ENST00000535302 GLMNQ92990 594 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 PRPF18Q99633 342 aaKnown RBP13.09□□□□□ -0.31
SPG11-203ENST00000535302 CATSPERBQ9H7T0 1116 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 WWOXQ9NZC7 414 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 NFICP08651 508 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 B3GALNT2Q8NCR0 500 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 ERP27Q96DN0 273 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 MED8Q96G25 268 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 WDCPQ9H6R7 721 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 TMEM120BA0PK00 339 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 DEAF1O75398 565 aaPredicted RBP13.09□□□□□ -0.31
SPG11-203ENST00000535302 ALDH7A1P49419 539 aaKnown RBP13.09□□□□□ -0.31
SPG11-203ENST00000535302 PRIM2P49643 509 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 POU4F1Q01851 419 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 GRB10Q13322 594 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 TDRD10Q5VZ19 366 aaKnown RBP13.09□□□□□ -0.31
SPG11-203ENST00000535302 ZIM3Q96PE6 472 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 TIPINQ9BVW5 301 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 ENTPD7Q9NQZ7 604 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 INTS13Q9NVM9 706 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 NSMCE4AQ9NXX6 385 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 CASTOR2A6NHX0 329 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 CHUKO15111 745 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 TOMM70O94826 608 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 PYGMP11217 842 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 ITIH2P19823 946 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 NUDT2P50583 147 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 SEC24CP53992 1094 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 MAPRE2Q15555 327 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 CLEC16AQ2KHT3 1053 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 NBPF9Q3BBW0 867 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 TTC39BQ5VTQ0 682 aaPredicted RBP13.09□□□□□ -0.31
SPG11-203ENST00000535302 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.09□□□□□ -0.31
SPG11-203ENST00000535302 TSEN34Q9BSV6 310 aaKnown RBP13.09□□□□□ -0.31
SPG11-203ENST00000535302 SPATA16Q9BXB7 569 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 PSD3Q9NYI0 1048 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 HBP1O60381 514 aa13.08□□□□□ -0.31
SPG11-203ENST00000535302 AP1G2O75843 785 aa13.08□□□□□ -0.31
SPG11-203ENST00000535302 RALGDSQ12967 914 aa13.08□□□□□ -0.31
SPG11-203ENST00000535302 KCNB2Q92953 911 aa13.08□□□□□ -0.31
SPG11-203ENST00000535302 MTFMTQ96DP5 389 aaKnown RBP13.08□□□□□ -0.31
SPG11-203ENST00000535302 SH3GL1Q99961 368 aa13.08□□□□□ -0.31
SPG11-203ENST00000535302 CEP41Q9BYV8 373 aa13.08□□□□□ -0.31
SPG11-203ENST00000535302 IMPAD1Q9NX62 359 aa13.08□□□□□ -0.31
SPG11-203ENST00000535302 RUVBL2Q9Y230 463 aaKnown RBP13.08□□□□□ -0.31
SPG11-203ENST00000535302 MAGEB2O15479 319 aa13.08□□□□□ -0.32
SPG11-203ENST00000535302 CTCFP49711 727 aaPredicted RBP13.08□□□□□ -0.32
SPG11-203ENST00000535302 ARF5P84085 180 aa13.08□□□□□ -0.32
SPG11-203ENST00000535302 NOA1Q8NC60 698 aaKnown RBP13.08□□□□□ -0.32
SPG11-203ENST00000535302 NFKBIZQ9BYH8 718 aa13.08□□□□□ -0.32
SPG11-203ENST00000535302 PIH1D1Q9NWS0 290 aaKnown RBP13.08□□□□□ -0.32
SPG11-203ENST00000535302 UBP1Q9NZI7 540 aa13.08□□□□□ -0.32
SPG11-203ENST00000535302 AP3B1O00203 1094 aa13.08□□□□□ -0.32
SPG11-203ENST00000535302 POLBP06746 335 aa13.08□□□□□ -0.32
SPG11-203ENST00000535302 TAF6P49848 677 aa13.08□□□□□ -0.32
SPG11-203ENST00000535302 ABCE1P61221 599 aaKnown RBP13.08□□□□□ -0.32
SPG11-203ENST00000535302 P3H2Q8IVL5 708 aa13.08□□□□□ -0.32
SPG11-203ENST00000535302 TFB1MQ8WVM0 346 aaKnown RBP13.08□□□□□ -0.32
SPG11-203ENST00000535302 AKT1S1Q96B36 256 aa13.08□□□□□ -0.32
SPG11-203ENST00000535302 RPRD1AQ96P16 312 aaPredicted RBP13.08□□□□□ -0.32
SPG11-203ENST00000535302 CARD9Q9H257 536 aa13.08□□□□□ -0.32
SPG11-203ENST00000535302 AGPAT3Q9NRZ7 376 aa13.08□□□□□ -0.32
SPG11-203ENST00000535302 SLC38A7Q9NVC3 462 aa13.08□□□□□ -0.32
SPG11-203ENST00000535302 CRLS1Q9UJA2 301 aa13.08□□□□□ -0.32
SPG11-203ENST00000535302 TECPR2O15040 1411 aa13.08□□□□□ -0.32
SPG11-203ENST00000535302 EPN3Q9H201 632 aa13.08□□□□□ -0.32
SPG11-203ENST00000535302 E9PBE3 544 aa13.08□□□□□ -0.32
SPG11-203ENST00000535302 AGTP01019 485 aa13.08□□□□□ -0.32
SPG11-203ENST00000535302 RBP3P10745 1247 aa13.08□□□□□ -0.32
SPG11-203ENST00000535302 MBL2P11226 248 aaPredicted RBP13.08□□□□□ -0.32
SPG11-203ENST00000535302 PTGER2P43116 358 aa13.08□□□□□ -0.32
SPG11-203ENST00000535302 CUL2Q13617 745 aa13.08□□□□□ -0.32
SPG11-203ENST00000535302 LY6KQ17RY6 165 aa13.08□□□□□ -0.32
SPG11-203ENST00000535302 USP39Q53GS9 565 aaKnown RBP13.08□□□□□ -0.32
SPG11-203ENST00000535302 MRPL39Q9NYK5 338 aaKnown RBP13.08□□□□□ -0.32
SPG11-203ENST00000535302 RNF112Q9ULX5 631 aa13.08□□□□□ -0.32
SPG11-203ENST00000535302 PADI4Q9UM07 663 aa13.08□□□□□ -0.32
SPG11-203ENST00000535302 PCDHB8Q9UN66 801 aa13.08□□□□□ -0.32
SPG11-203ENST00000535302 PCDHB2Q9Y5E7 798 aa13.08□□□□□ -0.32
SPG11-203ENST00000535302 CEP152O94986 1710 aa13.08□□□□□ -0.32
SPG11-203ENST00000535302 PDS5AQ29RF7 1337 aaKnown RBP13.08□□□□□ -0.32
SPG11-203ENST00000535302 RRN3P2A6NIE6 340 aa13.08□□□□□ -0.32
SPG11-203ENST00000535302 RPA1P27694 616 aa13.08□□□□□ -0.32
SPG11-203ENST00000535302 WDR35Q9P2L0 1181 aa13.08□□□□□ -0.32
SPG11-203ENST00000535302 SLC9A8Q9Y2E8 581 aa13.08□□□□□ -0.32
SPG11-203ENST00000535302 ARL2BPQ9Y2Y0 163 aa13.08□□□□□ -0.32
SPG11-203ENST00000535302 B2RBV5 119 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 BARGINQ6ZT62 677 aa13.07□□□□□ -0.32
SPG11-203ENST00000535302 LUZP2Q86TE4 346 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms