RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 UNC93AQ86WB7 457 aa32.21■■■□□ 2.75
SSSCA1-207ENST00000533115 C1orf210Q8IVY1 113 aa32.21■■■□□ 2.75
SSSCA1-207ENST00000533115 FAM3CQ92520 227 aa32.21■■■□□ 2.75
SSSCA1-207ENST00000533115 CLDN23Q96B33 292 aa32.21■■■□□ 2.75
SSSCA1-207ENST00000533115 MED10Q9BTT4 135 aa32.21■■■□□ 2.75
SSSCA1-207ENST00000533115 ZNF638Q14966 1978 aaKnown RBP32.2■■■□□ 2.75
SSSCA1-207ENST00000533115 TRIM49BA6NDI0 452 aa32.2■■■□□ 2.75
SSSCA1-207ENST00000533115 FAM35AQ86V20 835 aa32.2■■■□□ 2.75
SSSCA1-207ENST00000533115 ZNF687Q8N1G0 1237 aa32.2■■■□□ 2.75
SSSCA1-207ENST00000533115 CRYBG2Q8N1P7 616 aa32.2■■■□□ 2.75
SSSCA1-207ENST00000533115 CCDC150Q8NCX0 1101 aa32.2■■■□□ 2.75
SSSCA1-207ENST00000533115 MSANTD3Q96H12 275 aa32.2■■■□□ 2.75
SSSCA1-207ENST00000533115 C8orf33Q9H7E9 229 aaPredicted RBP32.2■■■□□ 2.75
SSSCA1-207ENST00000533115 HMGXB4Q9UGU5 601 aa32.2■■■□□ 2.75
SSSCA1-207ENST00000533115 NDRG2Q9UN36 371 aaKnown RBP32.2■■■□□ 2.75
SSSCA1-207ENST00000533115 TRAV19A0A0A6YYK7 116 aa32.19■■■□□ 2.74
SSSCA1-207ENST00000533115 PSMA7O14818 248 aa32.19■■■□□ 2.74
SSSCA1-207ENST00000533115 USP17L7P0C7H9 530 aa32.19■■■□□ 2.74
SSSCA1-207ENST00000533115 CCNE1P24864 410 aa32.19■■■□□ 2.74
SSSCA1-207ENST00000533115 MXI1P50539 228 aa32.19■■■□□ 2.74
SSSCA1-207ENST00000533115 KPNA1P52294 538 aaPredicted RBP32.19■■■□□ 2.74
SSSCA1-207ENST00000533115 ORC1Q13415 861 aa32.19■■■□□ 2.74
SSSCA1-207ENST00000533115 FZD5Q13467 585 aa32.19■■■□□ 2.74
SSSCA1-207ENST00000533115 PAQR9Q6ZVX9 377 aa32.19■■■□□ 2.74
SSSCA1-207ENST00000533115 DHTKD1Q96HY7 919 aaPredicted RBP32.19■■■□□ 2.74
SSSCA1-207ENST00000533115 SLC22A12Q96S37 553 aa32.19■■■□□ 2.74
SSSCA1-207ENST00000533115 CYP2S1Q96SQ9 504 aa32.19■■■□□ 2.74
SSSCA1-207ENST00000533115 NIF3L1Q9GZT8 377 aa32.19■■■□□ 2.74
SSSCA1-207ENST00000533115 CYP3A43Q9HB55 503 aa32.19■■■□□ 2.74
SSSCA1-207ENST00000533115 GTSE1Q9NYZ3 720 aa32.19■■■□□ 2.74
SSSCA1-207ENST00000533115 TRPM5Q9NZQ8 1165 aa32.19■■■□□ 2.74
SSSCA1-207ENST00000533115 PPP1R2P41236 205 aa32.18■■■□□ 2.74
SSSCA1-207ENST00000533115 NBL1P41271 181 aa32.18■■■□□ 2.74
SSSCA1-207ENST00000533115 RPS9P46781 194 aaKnown RBP32.18■■■□□ 2.74
SSSCA1-207ENST00000533115 INCA1Q0VD86 236 aa32.18■■■□□ 2.74
SSSCA1-207ENST00000533115 GCNT4Q9P109 453 aa32.18■■■□□ 2.74
SSSCA1-207ENST00000533115 ANAPC1Q9H1A4 1944 aa32.18■■■□□ 2.74
SSSCA1-207ENST00000533115 C2orf78A6NCI8 922 aa32.17■■■□□ 2.74
SSSCA1-207ENST00000533115 CKMP06732 381 aa32.17■■■□□ 2.74
SSSCA1-207ENST00000533115 CD44P16070 742 aaKnown RBP32.17■■■□□ 2.74
SSSCA1-207ENST00000533115 PPP3CCP48454 512 aa32.17■■■□□ 2.74
SSSCA1-207ENST00000533115 TNK2Q07912 1038 aa32.17■■■□□ 2.74
SSSCA1-207ENST00000533115 C1orf228Q6PIY5 440 aa32.17■■■□□ 2.74
SSSCA1-207ENST00000533115 FUKQ8N0W3 1084 aa32.17■■■□□ 2.74
SSSCA1-207ENST00000533115 ARL14EPQ8N8R7 260 aaPredicted RBP32.17■■■□□ 2.74
SSSCA1-207ENST00000533115 FBXL13Q8NEE6 735 aa32.17■■■□□ 2.74
SSSCA1-207ENST00000533115 TTC8Q8TAM2 541 aa32.17■■■□□ 2.74
SSSCA1-207ENST00000533115 SEMA4DQ92854 862 aa32.17■■■□□ 2.74
SSSCA1-207ENST00000533115 SMARCD1Q96GM5 515 aa32.17■■■□□ 2.74
SSSCA1-207ENST00000533115 KCNK16Q96T55 309 aa32.17■■■□□ 2.74
SSSCA1-207ENST00000533115 GKN1Q9NS71 199 aa32.17■■■□□ 2.74
SSSCA1-207ENST00000533115 MYO15AQ9UKN7 3530 aa32.17■■■□□ 2.74
SSSCA1-207ENST00000533115 KIF26AQ9ULI4 1882 aaPredicted RBP32.16■■■□□ 2.74
SSSCA1-207ENST00000533115 SOX9P48436 509 aa32.16■■■□□ 2.74
SSSCA1-207ENST00000533115 TCERG1LQ5VWI1 586 aa32.16■■■□□ 2.74
SSSCA1-207ENST00000533115 NUP93Q8N1F7 819 aa32.16■■■□□ 2.74
SSSCA1-207ENST00000533115 RIN3Q8TB24 985 aa32.16■■■□□ 2.74
SSSCA1-207ENST00000533115 FAM83CQ9BQN1 747 aa32.16■■■□□ 2.74
SSSCA1-207ENST00000533115 DMAP1Q9NPF5 467 aaPredicted RBP32.16■■■□□ 2.74
SSSCA1-207ENST00000533115 SPATA6Q9NWH7 488 aaPredicted RBP32.16■■■□□ 2.74
SSSCA1-207ENST00000533115 RAB20Q9NX57 234 aa32.16■■■□□ 2.74
SSSCA1-207ENST00000533115 PROB1E7EW31 1015 aa32.15■■■□□ 2.74
SSSCA1-207ENST00000533115 SPECC1L-ADORA2AF8WAN1 911 aa32.15■■■□□ 2.74
SSSCA1-207ENST00000533115 CCDC130P13994 396 aa32.15■■■□□ 2.74
SSSCA1-207ENST00000533115 PFKLP17858 780 aa32.15■■■□□ 2.74
SSSCA1-207ENST00000533115 HDCP19113 662 aa32.15■■■□□ 2.74
SSSCA1-207ENST00000533115 TRIM21P19474 475 aaKnown RBP32.15■■■□□ 2.74
SSSCA1-207ENST00000533115 BMP6P22004 513 aa32.15■■■□□ 2.74
SSSCA1-207ENST00000533115 PDE6CP51160 858 aa32.15■■■□□ 2.74
SSSCA1-207ENST00000533115 UBE2HP62256 183 aa32.15■■■□□ 2.74
SSSCA1-207ENST00000533115 TAF10Q12962 218 aa32.15■■■□□ 2.74
SSSCA1-207ENST00000533115 MORC3Q14149 939 aa32.15■■■□□ 2.74
SSSCA1-207ENST00000533115 DCAF17Q5H9S7 520 aaPredicted RBP32.15■■■□□ 2.74
SSSCA1-207ENST00000533115 RALGPS2Q86X27 583 aaPredicted RBP32.15■■■□□ 2.74
SSSCA1-207ENST00000533115 SLC2A14Q8TDB8 520 aa32.15■■■□□ 2.74
SSSCA1-207ENST00000533115 TWNKQ96RR1 684 aa32.15■■■□□ 2.74
SSSCA1-207ENST00000533115 KRT82Q9NSB4 513 aa32.15■■■□□ 2.74
SSSCA1-207ENST00000533115 DMDP11532 3685 aa32.14■■■□□ 2.74
SSSCA1-207ENST00000533115 ZNF840PA6NDX5 716 aa32.14■■■□□ 2.74
SSSCA1-207ENST00000533115 AP1G2O75843 785 aa32.14■■■□□ 2.74
SSSCA1-207ENST00000533115 RTN3O95197 1032 aaPredicted RBP32.14■■■□□ 2.74
SSSCA1-207ENST00000533115 ITPRIPL2Q3MIP1 535 aa32.14■■■□□ 2.74
SSSCA1-207ENST00000533115 CC2D1AQ6P1N0 951 aaPredicted RBP32.14■■■□□ 2.74
SSSCA1-207ENST00000533115 C12orf29Q8N999 325 aa32.14■■■□□ 2.74
SSSCA1-207ENST00000533115 FAXDC2Q96IV6 333 aa32.14■■■□□ 2.74
SSSCA1-207ENST00000533115 SLITRK1Q96PX8 696 aa32.14■■■□□ 2.74
SSSCA1-207ENST00000533115 NT5C1AQ9BXI3 368 aa32.14■■■□□ 2.74
SSSCA1-207ENST00000533115 FAM49BQ9NUQ9 324 aa32.14■■■□□ 2.74
SSSCA1-207ENST00000533115 ARMCX3Q9UH62 379 aaPredicted RBP32.14■■■□□ 2.74
SSSCA1-207ENST00000533115 CACNA1IQ9P0X4 2223 aa32.14■■■□□ 2.73
SSSCA1-207ENST00000533115 PPP1R3GB7ZBB8 358 aa32.13■■■□□ 2.73
SSSCA1-207ENST00000533115 CD58P19256 250 aa32.13■■■□□ 2.73
SSSCA1-207ENST00000533115 YWHAQP27348 245 aa32.13■■■□□ 2.73
SSSCA1-207ENST00000533115 CTHP32929 405 aa32.13■■■□□ 2.73
SSSCA1-207ENST00000533115 ANP32AP39687 249 aaKnown RBP32.13■■■□□ 2.73
SSSCA1-207ENST00000533115 IFRD2Q12894 506 aaPredicted RBP32.13■■■□□ 2.73
SSSCA1-207ENST00000533115 ZNF77Q15935 545 aa32.13■■■□□ 2.73
SSSCA1-207ENST00000533115 FRMD5Q7Z6J6 570 aa32.13■■■□□ 2.73
SSSCA1-207ENST00000533115 MAML2Q8IZL2 1156 aaPredicted RBP32.13■■■□□ 2.73
SSSCA1-207ENST00000533115 LMAN1LQ9HAT1 526 aa32.13■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms