RNA–Protein interactions for RNA: ENST00000533105.1

NDUFS3-210, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 4

Gene NDUFS3, Length 567 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-210ENST00000533105 HMGXB4Q9UGU5 601 aa23.32■■□□□ 1.32
NDUFS3-210ENST00000533105 C2orf78A6NCI8 922 aa23.31■■□□□ 1.32
NDUFS3-210ENST00000533105 LAMTOR5O43504 91 aa23.31■■□□□ 1.32
NDUFS3-210ENST00000533105 USP17L7P0C7H9 530 aa23.31■■□□□ 1.32
NDUFS3-210ENST00000533105 PMS1P54277 932 aaKnown RBP23.31■■□□□ 1.32
NDUFS3-210ENST00000533105 FZD5Q13467 585 aa23.31■■□□□ 1.32
NDUFS3-210ENST00000533105 KRT39Q6A163 491 aa23.31■■□□□ 1.32
NDUFS3-210ENST00000533105 CC2D1AQ6P1N0 951 aaPredicted RBP23.31■■□□□ 1.32
NDUFS3-210ENST00000533105 FAM35AQ86V20 835 aa23.31■■□□□ 1.32
NDUFS3-210ENST00000533105 ADSSL1Q8N142 457 aa23.31■■□□□ 1.32
NDUFS3-210ENST00000533105 ARL14EPQ8N8R7 260 aaPredicted RBP23.31■■□□□ 1.32
NDUFS3-210ENST00000533105 APOBEC3GQ9HC16 384 aaKnown RBP23.31■■□□□ 1.32
NDUFS3-210ENST00000533105 MAN1B1Q9UKM7 699 aa23.31■■□□□ 1.32
NDUFS3-210ENST00000533105 MIA3Q5JRA6 1907 aa23.31■■□□□ 1.32
NDUFS3-210ENST00000533105 COL4A2P08572 1712 aa23.3■■□□□ 1.32
NDUFS3-210ENST00000533105 TRIM49BA6NDI0 452 aa23.3■■□□□ 1.32
NDUFS3-210ENST00000533105 SPECC1L-ADORA2AF8WAN1 911 aa23.3■■□□□ 1.32
NDUFS3-210ENST00000533105 ABL1P00519 1130 aa23.3■■□□□ 1.32
NDUFS3-210ENST00000533105 GTF2H1P32780 548 aa23.3■■□□□ 1.32
NDUFS3-210ENST00000533105 RPS9P46781 194 aaKnown RBP23.3■■□□□ 1.32
NDUFS3-210ENST00000533105 MLLT6P55198 1093 aaPredicted RBP23.3■■□□□ 1.32
NDUFS3-210ENST00000533105 FKBP3Q00688 224 aaKnown RBP23.3■■□□□ 1.32
NDUFS3-210ENST00000533105 STIM1Q13586 685 aa23.3■■□□□ 1.32
NDUFS3-210ENST00000533105 ZNF268Q14587 947 aaPredicted RBP23.3■■□□□ 1.32
NDUFS3-210ENST00000533105 DCAF17Q5H9S7 520 aaPredicted RBP23.3■■□□□ 1.32
NDUFS3-210ENST00000533105 TCERG1LQ5VWI1 586 aa23.3■■□□□ 1.32
NDUFS3-210ENST00000533105 TRIM68Q6AZZ1 485 aa23.3■■□□□ 1.32
NDUFS3-210ENST00000533105 UNC93AQ86WB7 457 aa23.3■■□□□ 1.32
NDUFS3-210ENST00000533105 ELOA2Q8IYF1 753 aaPredicted RBP23.3■■□□□ 1.32
NDUFS3-210ENST00000533105 RIN3Q8TB24 985 aa23.3■■□□□ 1.32
NDUFS3-210ENST00000533105 MSANTD3Q96H12 275 aa23.3■■□□□ 1.32
NDUFS3-210ENST00000533105 KCNK16Q96T55 309 aa23.3■■□□□ 1.32
NDUFS3-210ENST00000533105 TTLL2Q9BWV7 592 aa23.3■■□□□ 1.32
NDUFS3-210ENST00000533105 LMAN1LQ9HAT1 526 aa23.3■■□□□ 1.32
NDUFS3-210ENST00000533105 STX10O60499 249 aa23.29■■□□□ 1.32
NDUFS3-210ENST00000533105 GFRA3O60609 400 aa23.29■■□□□ 1.32
NDUFS3-210ENST00000533105 SP9P0CG40 484 aa23.29■■□□□ 1.32
NDUFS3-210ENST00000533105 CCDC130P13994 396 aa23.29■■□□□ 1.32
NDUFS3-210ENST00000533105 HDCP19113 662 aa23.29■■□□□ 1.32
NDUFS3-210ENST00000533105 CD58P19256 250 aa23.29■■□□□ 1.32
NDUFS3-210ENST00000533105 MXI1P50539 228 aa23.29■■□□□ 1.32
NDUFS3-210ENST00000533105 TAF10Q12962 218 aa23.29■■□□□ 1.32
NDUFS3-210ENST00000533105 ITPRIPL2Q3MIP1 535 aa23.29■■□□□ 1.32
NDUFS3-210ENST00000533105 PAQR9Q6ZVX9 377 aa23.29■■□□□ 1.32
NDUFS3-210ENST00000533105 RALGPS2Q86X27 583 aaPredicted RBP23.29■■□□□ 1.32
NDUFS3-210ENST00000533105 NUP93Q8N1F7 819 aa23.29■■□□□ 1.32
NDUFS3-210ENST00000533105 ZNF687Q8N1G0 1237 aa23.29■■□□□ 1.32
NDUFS3-210ENST00000533105 SMARCD1Q96GM5 515 aa23.29■■□□□ 1.32
NDUFS3-210ENST00000533105 FAM83CQ9BQN1 747 aa23.29■■□□□ 1.32
NDUFS3-210ENST00000533105 NIF3L1Q9GZT8 377 aa23.29■■□□□ 1.32
NDUFS3-210ENST00000533105 EBF3Q9H4W6 596 aa23.29■■□□□ 1.32
NDUFS3-210ENST00000533105 KRT82Q9NSB4 513 aa23.29■■□□□ 1.32
NDUFS3-210ENST00000533105 FAM49BQ9NUQ9 324 aa23.29■■□□□ 1.32
NDUFS3-210ENST00000533105 GCNT4Q9P109 453 aa23.29■■□□□ 1.32
NDUFS3-210ENST00000533105 OBSL1O75147 1896 aa23.28■■□□□ 1.32
NDUFS3-210ENST00000533105 F5P12259 2224 aa23.28■■□□□ 1.32
NDUFS3-210ENST00000533105 PTPRDP23468 1912 aa23.28■■□□□ 1.32
NDUFS3-210ENST00000533105 PROB1E7EW31 1015 aa23.28■■□□□ 1.32
NDUFS3-210ENST00000533105 PSMA7O14818 248 aa23.28■■□□□ 1.32
NDUFS3-210ENST00000533105 SLC16A3O15427 465 aaKnown RBP23.28■■□□□ 1.32
NDUFS3-210ENST00000533105 AP1G2O75843 785 aa23.28■■□□□ 1.32
NDUFS3-210ENST00000533105 TRIM21P19474 475 aaKnown RBP23.28■■□□□ 1.32
NDUFS3-210ENST00000533105 CTHP32929 405 aa23.28■■□□□ 1.32
NDUFS3-210ENST00000533105 LRRC63Q05C16 580 aa23.28■■□□□ 1.32
NDUFS3-210ENST00000533105 C1orf228Q6PIY5 440 aa23.28■■□□□ 1.32
NDUFS3-210ENST00000533105 TXNDC11Q6PKC3 985 aa23.28■■□□□ 1.32
NDUFS3-210ENST00000533105 MAML2Q8IZL2 1156 aaPredicted RBP23.28■■□□□ 1.32
NDUFS3-210ENST00000533105 FUKQ8N0W3 1084 aa23.28■■□□□ 1.32
NDUFS3-210ENST00000533105 CRYBG2Q8N1P7 616 aa23.28■■□□□ 1.32
NDUFS3-210ENST00000533105 C12orf29Q8N999 325 aa23.28■■□□□ 1.32
NDUFS3-210ENST00000533105 SLC2A14Q8TDB8 520 aa23.28■■□□□ 1.32
NDUFS3-210ENST00000533105 SEMA4DQ92854 862 aa23.28■■□□□ 1.32
NDUFS3-210ENST00000533105 SLITRK1Q96PX8 696 aa23.28■■□□□ 1.32
NDUFS3-210ENST00000533105 CYP3A43Q9HB55 503 aa23.28■■□□□ 1.32
NDUFS3-210ENST00000533105 DMAP1Q9NPF5 467 aaPredicted RBP23.28■■□□□ 1.32
NDUFS3-210ENST00000533105 R4GN57 208 aa23.28■■□□□ 1.32
NDUFS3-210ENST00000533105 DENND4CQ5VZ89 1909 aa23.27■■□□□ 1.32
NDUFS3-210ENST00000533105 ZNF840PA6NDX5 716 aa23.27■■□□□ 1.32
NDUFS3-210ENST00000533105 RTN3O95197 1032 aaPredicted RBP23.27■■□□□ 1.32
NDUFS3-210ENST00000533105 YWHAQP27348 245 aa23.27■■□□□ 1.32
NDUFS3-210ENST00000533105 PPP3CCP48454 512 aa23.27■■□□□ 1.32
NDUFS3-210ENST00000533105 PDE6CP51160 858 aa23.27■■□□□ 1.32
NDUFS3-210ENST00000533105 CSTF1Q05048 431 aaKnown RBP23.27■■□□□ 1.32
NDUFS3-210ENST00000533105 MTAPQ13126 283 aa23.27■■□□□ 1.32
NDUFS3-210ENST00000533105 RUNX3Q13761 415 aa23.27■■□□□ 1.32
NDUFS3-210ENST00000533105 MTF1Q14872 753 aa23.27■■□□□ 1.32
NDUFS3-210ENST00000533105 KLHL10Q6JEL2 608 aa23.27■■□□□ 1.32
NDUFS3-210ENST00000533105 FBXL13Q8NEE6 735 aa23.27■■□□□ 1.32
NDUFS3-210ENST00000533105 NKD2Q969F2 451 aaPredicted RBP23.27■■□□□ 1.32
NDUFS3-210ENST00000533105 DHTKD1Q96HY7 919 aaPredicted RBP23.27■■□□□ 1.32
NDUFS3-210ENST00000533105 TWNKQ96RR1 684 aa23.27■■□□□ 1.32
NDUFS3-210ENST00000533105 HPS4Q9NQG7 708 aa23.27■■□□□ 1.32
NDUFS3-210ENST00000533105 CHMP5Q9NZZ3 219 aa23.27■■□□□ 1.32
NDUFS3-210ENST00000533105 BIN1O00499 593 aa23.26■■□□□ 1.31
NDUFS3-210ENST00000533105 CHRNB1P11230 501 aa23.26■■□□□ 1.31
NDUFS3-210ENST00000533105 ARSAP15289 507 aa23.26■■□□□ 1.31
NDUFS3-210ENST00000533105 CD44P16070 742 aaKnown RBP23.26■■□□□ 1.31
NDUFS3-210ENST00000533105 ADORA2BP29275 332 aa23.26■■□□□ 1.31
NDUFS3-210ENST00000533105 MCCD1P59942 119 aaPredicted RBP23.26■■□□□ 1.31
NDUFS3-210ENST00000533105 INCA1Q0VD86 236 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms